Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G2466 Erigeron canadensis HOM05D005824 ORTHO05D007029 0.0e+00 1227.2 642 100.0
Lsat_1_v5_gn_9_78801 Lactuca sativa HOM05D005824 ORTHO05D007029 2.4e-175 619.8 625 59.7
CSS0029355 Camellia sinensis var. sinensis HOM05D005824 ORTHO05D007029 6.5e-173 611.7 667 52.6
GSVIVG01031305001 Vitis vinifera HOM05D005824 ORTHO05D007029 3.2e-172 609.4 660 52.0
QL07p026733 Quercus lobata HOM05D005824 ORTHO05D007029 4.0e-170 602.4 663 51.6
Dinv24497 Davidia involucrata HOM05D005824 ORTHO05D007029 1.5e-169 600.5 659 52.2
HanXRQChr12g0362901 Helianthus annuus HOM05D005824 ORTHO05D007029 9.7e-169 597.8 645 54.4
CiPaw.10G020000 Carya illinoinensis HOM05D005824 ORTHO05D007029 1.8e-167 593.6 664 51.2
Sopen01g044470 Solanum pennellii HOM05D005824 ORTHO05D007029 7.0e-167 591.7 661 52.3
Rhsim11G0099700 Rhododendron simsii HOM05D005824 ORTHO05D007029 1.2e-166 590.9 643 52.6
Nitab4.5_0009690g0020 Nicotiana tabacum HOM05D005824 ORTHO05D007029 2.2e-165 586.6 674 51.5
Migut.B00860 Erythranthe guttata HOM05D005824 ORTHO05D007029 1.2e-163 580.9 644 52.8
Lj5A322T66 Lonicera japonica HOM05D005824 ORTHO05D007029 9.8e-161 571.2 637 52.1
SalBow7G3942 Salvia bowleyana HOM05D005824 ORTHO05D007029 9.8e-161 571.2 648 49.5
PGSC0003DMG400018251 Solanum tuberosum HOM05D005824 ORTHO05D007029 9.8e-161 571.2 663 51.3
MSTRG.15631 Avicennia marina HOM05D005824 ORTHO05D007029 2.4e-159 566.6 651 51.6
Cfa020078 Carpinus fangiana HOM05D005824 ORTHO05D007029 9.1e-159 564.7 667 50.5
CAN.G1374.10 Capsicum annuum HOM05D005824 ORTHO05D007029 1.2e-158 564.3 666 52.0
Manes.06G027100 Manihot esculenta HOM05D005824 ORTHO05D007029 1.1e-156 557.8 661 50.5
Glyma.02G192500 Glycine max HOM05D005824 ORTHO05D007029 2.1e-155 553.5 707 48.8
CANSAT54G1845 Cannabis sativa HOM05D005824 ORTHO05D007029 2.8e-155 553.1 701 46.6
Oeu061927.1 Olea europaea HOM05D005824 ORTHO05D007029 2.8e-155 553.1 700 47.9
Potri.015G010900 Populus trichocarpa HOM05D005824 ORTHO05D007029 4.7e-155 552.4 712 46.6
Glyma.10G084300 Glycine max HOM05D005824 ORTHO05D007029 7.5e-153 545.0 711 47.0
Lj3g0001001 Lotus japonicus HOM05D005824 ORTHO05D007029 1.3e-152 544.3 708 47.0
SGA_v2.0_scaffold33G13450 Striga asiatica HOM05D005824 ORTHO05D007029 2.8e-152 543.1 699 46.2
PSO339G3868 Papaver somniferum HOM05D005824 ORTHO05D007029 2.4e-151 540.0 643 49.6
Sabra15G0009000 Salix brachista HOM05D005824 ORTHO05D007029 3.1e-151 539.7 730 44.4
Haze_20113 Corylus avellana HOM05D005824 ORTHO05D007029 9.2e-151 538.1 731 46.5
Lj5g0026124 Lotus japonicus HOM05D005824 ORTHO05D007029 1.0e-149 534.6 708 45.3
Gohir.A03G155800 Gossypium hirsutum HOM05D005824 ORTHO05D007029 1.3e-149 534.3 710 46.1
vmacro01596 Vaccinium macrocarpon HOM05D005824 ORTHO05D007029 3.8e-149 532.7 635 49.0
VMungo0720G2244 Vigna mungo HOM05D005824 ORTHO05D007029 3.8e-149 532.7 699 46.6
PSO384G0570 Papaver somniferum HOM05D005824 ORTHO05D007029 5.0e-149 532.3 640 50.0
Prupe.6G306900 Prunus persica HOM05D005824 ORTHO05D007029 6.6e-149 531.9 708 46.3
arahy.Tifrunner.gnm1.ann1.E5V6X9 Arachis hypogaea HOM05D005824 ORTHO05D007029 2.5e-148 530.0 711 45.4
Eucgr.B01798 Eucalyptus grandis HOM05D005824 ORTHO05D007029 2.5e-148 530.0 675 48.0
Thecc.09G352900 Theobroma cacao HOM05D005824 ORTHO05D007029 2.5e-148 530.0 702 46.6
Gorai.005G200700 Gossypium raimondii HOM05D005824 ORTHO05D007029 7.3e-148 528.5 722 45.4
Lalb_Chr02g0154321 Lupinus albus HOM05D005824 ORTHO05D007029 7.3e-148 528.5 713 44.9
Ca_11665_v3 Cicer arietinum L. HOM05D005824 ORTHO05D007029 3.6e-147 526.2 673 47.3
Cc02_g35570 Coffea canephora HOM05D005824 ORTHO05D007029 3.6e-147 526.2 762 43.2
Cpa.g.sc48.209 Carica papaya HOM05D005824 ORTHO05D007029 4.7e-147 525.8 660 45.6
TAR362G0448 Trochodendron aralioides HOM05D005824 ORTHO05D007029 6.1e-147 525.4 663 47.5
arahy.Tifrunner.gnm1.ann1.S86EGP Arachis hypogaea HOM05D005824 ORTHO05D007029 2.3e-146 523.5 709 45.3
Psat6g118640 Pisum sativum HOM05D005824 ORTHO05D007029 4.0e-146 522.7 724 44.9
TPR.G12910 Trifolium pratense HOM05D005824 ORTHO05D007029 2.6e-145 520.0 709 45.8
Aqoxy2G02580 Aquilegia oxysepala HOM05D005824 ORTHO05D007029 3.4e-145 519.6 662 46.7
Atru.chr12.1601 Acer truncatum HOM05D005824 ORTHO05D007029 1.3e-144 517.7 699 45.4
Nitab4.5_0000185g0360 Nicotiana tabacum HOM05D005824 ORTHO05D007029 1.3e-144 517.7 664 47.6
Medtr1g055080 Medicago truncatula HOM05D005824 ORTHO05D007029 4.9e-144 515.8 707 45.8
PSO017G5895 Papaver somniferum HOM05D005824 ORTHO05D007029 1.4e-143 514.2 635 47.4
TPR.G21237 Trifolium pratense HOM05D005824 ORTHO05D007029 1.2e-142 511.1 719 44.2
ClCG07G011770 Citrullus lanatus HOM05D005824 ORTHO05D007029 2.0e-142 510.4 667 45.4
Nn2g14227 Nelumbo nucifera HOM05D005824 ORTHO05D007029 1.7e-141 507.3 655 47.8
MBI19_g32704_MAGBIO Magnolia biondii HOM05D005824 ORTHO05D007029 3.9e-141 506.1 736 43.6
PSO063G2449 Papaver somniferum HOM05D005824 ORTHO05D007029 6.6e-141 505.4 634 47.6
Sc09g0002470 Simmondsia chinensis HOM05D005824 ORTHO05D007029 6.6e-141 505.4 709 44.0
MELO3C017799.2 Cucumis melo HOM05D005824 ORTHO05D007029 3.6e-139 499.6 671 45.0
TWI38G0226 Tripterygium wilfordii HOM05D005824 ORTHO05D007029 3.6e-139 499.6 656 47.9
CsaV3_4G002430 Cucumis sativus L. HOM05D005824 ORTHO05D007029 4.7e-139 499.2 666 45.2
MD04G1189300 Malus domestica HOM05D005824 ORTHO05D007029 5.2e-138 495.7 704 44.6
DCAR_005271 Daucus carota HOM05D005824 ORTHO05D007029 1.2e-137 494.6 667 46.2
COL.COLO4_11087 Corchorus olitorius HOM05D005824 ORTHO05D007029 4.4e-137 492.7 639 46.5
Gohir.D02G178900 Gossypium hirsutum HOM05D005824 ORTHO05D007029 5.8e-137 492.3 722 43.4
MD12G1202100 Malus domestica HOM05D005824 ORTHO05D007029 2.2e-136 490.3 702 43.9
Hma1.2p1_1243F.1_g269980 Hydrangea macrophylla HOM05D005824 ORTHO05D007029 1.9e-135 487.3 558 53.0
Phvul.007G265900 Phaseolus vulgaris HOM05D005824 ORTHO05D007029 3.5e-134 483.0 709 44.1
AUR62006798 Chenopodium quinoa HOM05D005824 ORTHO05D007029 1.3e-133 481.1 750 41.5
EL10Ac4g09532 Beta vulgaris HOM05D005824 ORTHO05D007029 5.0e-133 479.2 717 42.5
RcHm_v2.0_Chr3g0458051 Rosa chinensis HOM05D005824 ORTHO05D007029 2.5e-132 476.9 715 44.6
Hund21844 Selenicereus undatus HOM05D005824 ORTHO05D007029 1.2e-131 474.6 806 39.3
AUR62000450 Chenopodium quinoa HOM05D005824 ORTHO05D007029 2.1e-131 473.8 755 42.1
FAN14G3202 Fragaria x ananassa HOM05D005824 ORTHO05D007029 2.8e-131 473.4 709 43.9
FvH4_6g08180 Fragaria vesca HOM05D005824 ORTHO05D007029 6.2e-131 472.2 709 43.7
Sed0007659 Sechium edule HOM05D005824 ORTHO05D007029 1.8e-130 470.7 663 43.1
Peaxi162Scf00357g00429 Petunia axillaris HOM05D005824 ORTHO05D007029 5.2e-130 469.2 607 47.6
THA.LOC104821746 Tarenaya hassleriana HOM05D005824 ORTHO05D007029 5.2e-130 469.2 725 41.1
Duzib168G0004 Durio zibethinus HOM05D005824 ORTHO05D007029 1.6e-126 457.6 637 44.7
FAN09G3961 Fragaria x ananassa HOM05D005824 ORTHO05D007029 2.7e-126 456.8 711 43.7
Duzib150G0567 Durio zibethinus HOM05D005824 ORTHO05D007029 2.5e-124 450.3 652 45.4
unitig_748.g6998 Utricularia gibba HOM05D005824 ORTHO05D000260 3.3e-124 449.9 651 42.9
ATR0693G066 Amborella trichopoda HOM05D005824 ORTHO05D007029 1.2e-123 448.0 645 42.9
Aa31LG11G9880 Aethionema arabicum HOM05D005824 ORTHO05D007029 3.1e-122 443.4 710 39.4
Thhalv10003721m.g Eutrema salsugineum HOM05D005824 ORTHO05D007029 3.8e-120 436.4 729 39.1
Carub.0006s2449 Capsella rubella HOM05D005824 ORTHO05D007029 1.2e-118 431.4 727 38.8
Sp2g21220 Schrenkiella parvula HOM05D005824 ORTHO05D007029 4.6e-118 429.5 734 39.5
CARHR186810 Cardamine hirsuta HOM05D005824 ORTHO05D007029 6.0e-118 429.1 731 39.4
Ah.10g027060 Amaranthus hybridus HOM05D005824 ORTHO05D007029 1.3e-117 427.9 752 38.7
Nitab4.5_0002783g0020 Nicotiana tabacum HOM05D005824 ORTHO05D007029 6.9e-114 415.6 647 42.5
FAN05G5613 Fragaria x ananassa HOM05D005824 ORTHO05D007029 1.7e-112 411.0 683 41.9
CDE01G0540 Ceratophyllum demersum HOM05D005824 ORTHO05D007029 1.3e-109 401.4 667 38.8
AT5G26760 Arabidopsis thaliana HOM05D005824 ORTHO05D007029 2.3e-109 400.6 749 37.0
AL6G38630 Arabidopsis lyrata HOM05D005824 ORTHO05D007029 4.8e-107 392.9 851 35.1
C02p58640 Brassica napus HOM05D005824 ORTHO05D007029 2.0e-105 387.5 827 34.2
BraA02t08872Z Brassica rapa HOM05D005824 ORTHO05D007029 2.9e-104 383.6 832 33.9
A02p39030 Brassica napus HOM05D005824 ORTHO05D007029 3.8e-104 383.3 834 33.8
BolC2t11924H Brassica oleracea HOM05D005824 ORTHO05D007029 4.2e-103 379.8 827 34.3
FAN02G4519 Fragaria x ananassa HOM05D005824 ORTHO05D007029 1.0e-101 375.2 686 39.1
Ciclev10011677m.g Citrus clementina HOM05D005824 ORTHO05D007029 5.1e-101 372.9 468 47.6
Os05g0134300 Oryza sativa ssp. japonica HOM05D005824 ORTHO05D007029 1.2e-97 361.7 722 37.0
BcaNung06222 Brassica carinata HOM05D005824 ORTHO05D007029 1.3e-91 341.7 821 33.3
PGR083G1123 Punica granatum HOM05D005824 ORTHO05D007029 2.4e-90 337.4 489 44.6
Actinidia35501 Actinidia chinensis HOM05D005824 ORTHO05D007029 1.9e-71 274.6 493 39.8
BcaNung03676 Brassica carinata HOM05D005824 ORTHO05D007029 9.4e-71 272.3 644 33.5
C07p41490 Brassica napus HOM05D005824 ORTHO05D007029 6.1e-70 269.6 662 34.0
Mapoly0075s0015 Marchantia polymorpha HOM05D005824 ORTHO05D007029 1.4e-69 268.5 720 31.0
BolC7t44682H Brassica oleracea HOM05D005824 ORTHO05D007029 3.9e-69 266.9 663 33.9
Zm00001eb354720 Zea mays HOM05D005824 ORTHO05D007029 3.7e-67 260.4 624 34.1
HPP92_021934 Vanilla planifolia HOM05D005824 ORTHO05D007029 2.0e-65 254.6 334 45.5
Gohir.A08G201701 Gossypium hirsutum HOM05D005824 ORTHO05D007029 2.6e-65 254.2 635 34.0
SMO203G0090 Selaginella moellendorffii HOM05D005824 ORTHO05D007029 2.9e-64 250.8 645 30.4
Solyc01g101010.4 Solanum lycopersicum HOM05D005824 ORTHO05D007029 1.4e-61 241.9 341 46.3
Nitab4.5_0000185g0370 Nicotiana tabacum HOM05D005824 ORTHO05D007029 2.2e-56 224.6 277 43.3
Pp3c6_10400 Physcomitrium patens HOM05D005824 ORTHO05D007029 2.6e-52 211.1 888 26.1
Hma1.2p1_1553F.1_g290340 Hydrangea macrophylla HOM05D005824 ORTHO05D007029 1.1e-50 205.7 615 32.7
SEGI_20129 Sequoiadendron giganteum HOM05D005824 ORTHO05D007029 6.5e-48 196.4 317 39.7
SGA_v2.0_scaffold438G51629 Striga asiatica HOM05D005824 ORTHO05D007029 6.5e-48 196.4 198 50.5
AagrBONN_evm.TU.Sc2ySwM_117.2728 Anthoceros agrestis HOM05D005824 ORTHO05D007029 4.1e-42 177.2 694 25.5
A06p36990 Brassica napus HOM05D005824 ORTHO05D007029 2.3e-40 171.4 177 50.8
BraA06t26625Z Brassica rapa HOM05D005824 ORTHO05D007029 2.3e-40 171.4 177 50.8
CBR_g20185 Chara braunii HOM05D005824 ORTHO05D007029 6.1e-38 163.3 354 32.8
HPP92_021933 Vanilla planifolia HOM05D005824 ORTHO05D007029 1.0e-32 146.0 184 45.1
Oeu060660.1 Olea europaea HOM05D005824 ORTHO05D007029 1.5e-28 132.1 127 53.5
Dinv30929 Davidia involucrata HOM05D005824 ORTHO05D007029 2.0e-25 121.7 118 55.9
Cfa020079 Carpinus fangiana HOM05D005824 ORTHO05D007029 2.3e-24 118.2 82 64.6
ECA232G1565 Erigeron canadensis HOM05D000263 ORTHO05D007029 4.4e-20 104.0 126 53.2
CDE12G0845 Ceratophyllum demersum HOM05D005824 ORTHO05D007029 1.4e-18 99.0 93 50.5
CANSAT54G0922 Cannabis sativa HOM05D005824 ORTHO05D007029 5.4e-18 97.1 206 35.0
Zm00001eb056090 Zea mays HOM05D000739 ORTHO05D007029 2.7e-17 94.7 112 47.3
Zm00001eb289330 Zea mays HOM05D005824 ORTHO05D007029 3.9e-16 90.9 100 50.0
Nitab4.5_0000185g0350 Nicotiana tabacum HOM05D005824 ORTHO05D007029 1.9e-15 88.6 99 48.5


User provided reference genes

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