Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G4340 Erigeron canadensis HOM05D002121 ORTHO05D008891 5.8e-115 417.5 206 100.0
Lsat_1_v5_gn_6_97640 Lactuca sativa HOM05D002121 ORTHO05D008891 4.9e-82 308.1 174 84.5
HanXRQChr05g0148721 Helianthus annuus HOM05D002121 ORTHO05D008891 3.9e-79 298.5 177 82.5
Actinidia03419 Actinidia chinensis HOM05D002121 ORTHO05D008891 1.1e-76 290.4 167 85.0
CiPaw.15G034100 Carya illinoinensis HOM05D002121 ORTHO05D008891 6.9e-76 287.7 181 79.0
GSVIVG01008832001 Vitis vinifera HOM05D002121 ORTHO05D008891 1.5e-75 286.6 165 81.8
Haze_17516 Corylus avellana HOM05D002121 ORTHO05D008891 4.5e-75 285.0 174 79.9
Prupe.1G492700 Prunus persica HOM05D002121 ORTHO05D008891 5.9e-75 284.6 174 79.3
CSS0024419 Camellia sinensis var. sinensis HOM05D002121 ORTHO05D008891 1.3e-74 283.5 167 83.2
RcHm_v2.0_Chr6g0296321 Rosa chinensis HOM05D002121 ORTHO05D008891 1.3e-74 283.5 174 78.7
Ciclev10001657m.g Citrus clementina HOM05D002121 ORTHO05D008891 1.7e-74 283.1 163 85.3
QL09p033741 Quercus lobata HOM05D002121 ORTHO05D008891 2.2e-74 282.7 174 78.2
CANSAT25G1674 Cannabis sativa HOM05D002121 ORTHO05D008891 5.0e-74 281.6 169 79.9
FAN27G1590 Fragaria x ananassa HOM05D002121 ORTHO05D008891 6.5e-74 281.2 174 78.2
Thhalv10008051m.g Eutrema salsugineum HOM05D002121 ORTHO05D008891 8.5e-74 280.8 179 76.5
Gohir.A05G237100 Gossypium hirsutum HOM05D002121 ORTHO05D008891 1.1e-73 280.4 170 80.6
Nn1g08892 Nelumbo nucifera HOM05D002121 ORTHO05D008891 1.1e-73 280.4 171 77.8
Rhsim11G0070100 Rhododendron simsii HOM05D002121 ORTHO05D008891 1.1e-73 280.4 163 81.6
THA.LOC104800213 Tarenaya hassleriana HOM05D002121 ORTHO05D008891 1.1e-73 280.4 170 80.6
Dinv14647 Davidia involucrata HOM05D002121 ORTHO05D008891 3.2e-73 278.9 183 74.3
FAN15G1848 Fragaria x ananassa HOM05D002121 ORTHO05D008891 3.2e-73 278.9 174 77.6
Gorai.009G248000 Gossypium raimondii HOM05D002121 ORTHO05D008891 3.2e-73 278.9 170 80.0
BcaC05g26090 Brassica carinata HOM05D002121 ORTHO05D008891 7.2e-73 277.7 167 80.8
TWI32G0996 Tripterygium wilfordii HOM05D002121 ORTHO05D008891 7.2e-73 277.7 175 76.6
TAR376G0507 Trochodendron aralioides HOM05D002121 ORTHO05D008891 7.2e-73 277.7 163 81.0
Gohir.D05G239200 Gossypium hirsutum HOM05D002121 ORTHO05D008891 9.3e-73 277.3 170 79.4
Dinv27282 Davidia involucrata HOM05D002121 ORTHO05D008891 1.2e-72 276.9 163 81.6
FAN20G0023 Fragaria x ananassa HOM05D002121 ORTHO05D008891 1.2e-72 276.9 165 80.6
Manes.02G166400 Manihot esculenta HOM05D002121 ORTHO05D008891 1.2e-72 276.9 185 73.0
Eucgr.F03811 Eucalyptus grandis HOM05D002121 ORTHO05D008891 1.6e-72 276.6 163 81.0
Aqoxy6G00263 Aquilegia oxysepala HOM05D002121 ORTHO05D008891 2.1e-72 276.2 181 74.6
FvH4_2g27490 Fragaria vesca HOM05D002121 ORTHO05D008891 2.1e-72 276.2 174 77.0
PSO170G0582 Papaver somniferum HOM05D002121 ORTHO05D008891 2.7e-72 275.8 165 79.4
Thecc.08G129600 Theobroma cacao HOM05D002121 ORTHO05D008891 2.7e-72 275.8 167 80.2
BolC5t30768H Brassica oleracea HOM05D002121 ORTHO05D004000 3.6e-72 275.4 167 80.2
BraA06t24872Z Brassica rapa HOM05D002121 ORTHO05D008891 4.6e-72 275.0 170 80.0
SGA_v2.0_scaffold52G18936 Striga asiatica HOM05D002121 ORTHO05D008891 4.6e-72 275.0 172 77.9
Nitab4.5_0000111g0140 Nicotiana tabacum HOM05D002121 ORTHO05D008891 7.9e-72 274.2 186 74.7
Sp1g19270 Schrenkiella parvula HOM05D002121 ORTHO05D008891 7.9e-72 274.2 169 78.1
Carub.0001s2115 Capsella rubella HOM05D002121 ORTHO05D008891 1.0e-71 273.9 171 78.4
AL1G34880 Arabidopsis lyrata HOM05D002121 ORTHO05D008891 1.3e-71 273.5 169 78.7
Migut.C01114 Erythranthe guttata HOM05D002121 ORTHO05D008891 1.3e-71 273.5 167 76.0
Lalb_Chr23g0271121 Lupinus albus HOM05D002121 ORTHO05D008891 1.3e-71 273.5 167 79.0
A06p17800 Brassica napus HOM05D002121 ORTHO05D004000 1.8e-71 273.1 168 80.4
CARHR022070 Cardamine hirsuta HOM05D002121 ORTHO05D008891 1.8e-71 273.1 185 73.0
Duzib093G0305 Durio zibethinus HOM05D002121 ORTHO05D008891 1.8e-71 273.1 170 77.1
PGSC0003DMG400009246 Solanum tuberosum HOM05D002121 ORTHO05D008891 2.3e-71 272.7 168 77.4
MSTRG.25368 Avicennia marina HOM05D002121 ORTHO05D008891 3.0e-71 272.3 187 70.1
BcaB03g12775 Brassica carinata HOM05D002121 ORTHO05D008891 3.9e-71 271.9 168 79.2
BcaB03g12777 Brassica carinata HOM05D002121 ORTHO05D008891 3.9e-71 271.9 168 79.2
BcaB07g32168 Brassica carinata HOM05D002121 ORTHO05D008891 3.9e-71 271.9 168 79.2
C05p20690 Brassica napus HOM05D002121 ORTHO05D004000 3.9e-71 271.9 168 80.4
Atru.chr13.1527 Acer truncatum HOM05D002121 ORTHO05D008891 5.1e-71 271.6 163 79.8
Hund17311 Selenicereus undatus HOM05D002121 ORTHO05D008891 5.1e-71 271.6 170 75.3
AT1G21710 Arabidopsis thaliana HOM05D002121 ORTHO05D008891 6.7e-71 271.2 169 76.9
AUR62002267 Chenopodium quinoa HOM05D002121 ORTHO05D008891 1.5e-70 270.0 163 75.5
DCAR_014379 Daucus carota HOM05D001700 ORTHO05D002131 1.5e-70 270.0 170 77.6
Sopen11g009470 Solanum pennellii HOM05D002121 ORTHO05D008891 1.5e-70 270.0 168 76.2
AUR62015427 Chenopodium quinoa HOM05D002121 ORTHO05D008891 3.3e-70 268.9 171 73.1
Sc15g0002960 Simmondsia chinensis HOM05D002121 ORTHO05D008891 3.3e-70 268.9 170 77.1
MELO3C010637.2 Cucumis melo HOM05D002121 ORTHO05D008891 4.3e-70 268.5 169 75.7
SalBow7G2694 Salvia bowleyana HOM05D002121 ORTHO05D008891 7.4e-70 267.7 167 74.3
Aa31LG7G5680 Aethionema arabicum HOM05D002121 ORTHO05D008891 9.7e-70 267.3 169 76.9
Cpa.g.sc64.123 Carica papaya HOM05D002121 ORTHO05D008891 9.7e-70 267.3 174 75.9
CsaV3_6G034200 Cucumis sativus L. HOM05D002121 ORTHO05D008891 9.7e-70 267.3 169 76.3
EL10Ac1g00004 Beta vulgaris HOM05D002121 ORTHO05D008891 1.3e-69 266.9 170 72.9
arahy.Tifrunner.gnm1.ann1.IC0JL2 Arachis hypogaea HOM05D002121 ORTHO05D008891 1.6e-69 266.5 163 78.5
arahy.Tifrunner.gnm1.ann1.VL2KU3 Arachis hypogaea HOM05D002121 ORTHO05D008891 1.6e-69 266.5 163 78.5
Cc10_g12290 Coffea canephora HOM05D002121 ORTHO05D008891 1.6e-69 266.5 171 73.1
CAN.G1391.3 Capsicum annuum HOM05D002121 ORTHO05D008891 2.8e-69 265.8 163 77.9
Potri.005G180700 Populus trichocarpa HOM05D002121 ORTHO05D008891 3.7e-69 265.4 185 69.7
Sabra05G0136700 Salix brachista HOM05D002121 ORTHO05D008891 4.8e-69 265.0 185 69.2
MBI06_g04552_MAGBIO Magnolia biondii HOM05D002121 ORTHO05D008891 8.2e-69 264.2 170 74.1
Ah.05g171490 Amaranthus hybridus HOM05D002121 ORTHO05D008891 1.4e-68 263.5 163 74.2
Phvul.009G127600 Phaseolus vulgaris HOM05D002121 ORTHO05D008891 1.4e-68 263.5 167 77.2
Glyma.06G115500 Glycine max HOM05D002121 ORTHO05D008891 1.8e-68 263.1 167 76.0
vmacro00852 Vaccinium macrocarpon HOM05D002121 ORTHO05D008891 1.8e-68 263.1 202 66.3
VMungo1309G2347 Vigna mungo HOM05D002121 ORTHO05D008891 4.1e-68 261.9 167 76.6
Lj1g0016880 Lotus japonicus HOM05D002121 ORTHO05D008891 9.1e-68 260.8 167 76.6
Ca_16577_v3 Cicer arietinum L. HOM05D002121 ORTHO05D008891 3.4e-67 258.8 174 73.0
Medtr3g088510 Medicago truncatula HOM05D002121 ORTHO05D008891 3.4e-67 258.8 174 71.3
CDE08G1413 Ceratophyllum demersum HOM05D002121 ORTHO05D008891 1.7e-66 256.5 161 74.5
Psat5g086080 Pisum sativum HOM05D002121 ORTHO05D008891 2.9e-66 255.8 188 68.1
COL.COLO4_37918 Corchorus olitorius HOM05D002121 ORTHO05D008891 3.8e-66 255.4 203 65.0
FAN24G0685 Fragaria x ananassa HOM05D002121 ORTHO05D008891 3.0e-63 245.7 174 71.8
ATR0709G083 Amborella trichopoda HOM05D002121 ORTHO05D008891 3.9e-63 245.4 161 72.7
HPP92_011391 Vanilla planifolia HOM05D002121 ORTHO05D008891 5.1e-63 245.0 161 70.2
unitig_699.g19768 Utricularia gibba HOM05D002121 ORTHO05D003088 5.7e-62 241.5 177 65.5
Os02g0552600 Oryza sativa ssp. japonica HOM05D002121 ORTHO05D008891 2.8e-61 239.2 183 63.4
ClCG08G005910 Citrullus lanatus HOM05D002121 ORTHO05D008891 1.8e-60 236.5 169 69.2
Peaxi162Scf00310g00513 Petunia axillaris HOM05D002121 ORTHO05D008891 1.8e-60 236.5 181 66.9
Zm00001eb243580 Zea mays HOM05D002121 ORTHO05D008891 3.1e-60 235.7 167 66.5
Oeu032210.1 Olea europaea HOM05D002121 ORTHO05D008891 2.2e-58 229.6 138 79.0
SEGI_00220 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 8.5e-58 227.6 170 64.1
SEGI_39313 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 8.5e-58 227.6 170 64.1
Pp3c15_7530 Physcomitrium patens HOM05D002121 ORTHO05D008891 9.4e-57 224.2 183 59.6
AagrBONN_evm.TU.Sc2ySwM_228.2791 Anthoceros agrestis HOM05D002121 ORTHO05D008891 2.7e-56 222.6 173 63.0
Mapoly0066s0098 Marchantia polymorpha HOM05D002121 ORTHO05D008891 1.4e-55 220.3 175 60.0
SMO367G0241 Selaginella moellendorffii HOM05D002121 ORTHO05D008891 8.8e-55 217.6 191 56.0
CAN.G1347.2 Capsicum annuum HOM05D002121 ORTHO05D008891 7.2e-49 198.0 163 62.0
Lj7A344T50 Lonicera japonica HOM05D002121 ORTHO05D008891 1.3e-45 187.2 109 79.8
Cre01.g063632 Chlamydomonas reinhardtii HOM05D002121 ORTHO05D008891 8.2e-45 184.5 149 56.4
Hma1.2p1_0612F.1_g188790 Hydrangea macrophylla HOM05D002121 ORTHO05D008891 2.0e-43 179.9 109 75.2
DCAR_002302 Daucus carota HOM05D002121 ORTHO05D008891 5.9e-43 178.3 108 76.9
Sed0022381 Sechium edule HOM05D002121 ORTHO05D008891 3.2e-41 172.6 108 72.2
Solyc11g018510.2 Solanum lycopersicum HOM05D002121 ORTHO05D008891 3.2e-41 172.6 107 73.8
Sc15g0002970 Simmondsia chinensis HOM05D002121 ORTHO05D008891 2.3e-39 166.4 130 66.9
Migut.C00404 Erythranthe guttata HOM05D002121 ORTHO05D008891 1.3e-37 160.6 170 51.8
MCO08G296 Micromonas commoda HOM05D002121 ORTHO05D008891 4.8e-37 158.7 152 50.7
Hma1.2p1_0612F.1_g188810 Hydrangea macrophylla HOM05D002121 ORTHO05D008891 3.5e-19 99.4 57 86.0
Cfa022494 Carpinus fangiana HOM05D002121 ORTHO05D008891 3.0e-18 96.3 207 34.3
HanXRQChr15g0473481 Helianthus annuus HOM05D002121 ORTHO05D008891 1.1e-17 94.4 51 84.3
PRCOL_00004066 Prasinoderma coloniale HOM05D002121 ORTHO05D008891 7.8e-11 71.6 147 28.6
PRCOL_00001975 Prasinoderma coloniale HOM05D002121 ORTHO05D008891 1.3e-10 70.9 164 30.5
Sc15g0002990 Simmondsia chinensis HOM05D002121 ORTHO05D008891 1.5e-06 57.4 37 70.3


User provided reference genes

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