Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G3439 Erigeron canadensis HOM05D006305 ORTHO05D007984 7.7e-187 657.1 367 100.0
HanXRQChr15g0472081 Helianthus annuus HOM05D006305 ORTHO05D007984 5.8e-150 534.6 370 83.2
Lsat_1_v5_gn_2_67520 Lactuca sativa HOM05D006305 ORTHO05D007984 2.5e-145 519.2 366 76.8
CSS0018445 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 6.4e-133 478.0 365 74.8
CSS0021232 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 1.6e-131 473.4 376 71.3
Lj9A683T26 Lonicera japonica HOM05D006305 ORTHO05D007984 1.0e-130 470.7 373 71.0
Cc02_g33730 Coffea canephora HOM05D006305 ORTHO05D007984 1.3e-130 470.3 378 71.4
Rhsim05G0143900 Rhododendron simsii HOM05D006305 ORTHO05D007984 1.3e-130 470.3 373 70.5
Dinv23970 Davidia involucrata HOM05D006305 ORTHO05D007984 1.8e-130 469.9 386 69.2
Manes.09G164300 Manihot esculenta HOM05D006305 ORTHO05D007984 5.6e-129 464.9 360 70.6
CAN.G479.41 Capsicum annuum HOM05D006305 ORTHO05D007984 1.6e-128 463.4 366 67.2
CANSAT54G0217 Cannabis sativa HOM05D006305 ORTHO05D007984 2.8e-128 462.6 375 67.5
Nitab4.5_0002756g0070 Nicotiana tabacum HOM05D006305 ORTHO05D007984 3.7e-128 462.2 387 67.4
Peaxi162Scf00274g00026 Petunia axillaris HOM05D006305 ORTHO05D007984 4.8e-128 461.8 406 63.3
PGSC0003DMG400024658 Solanum tuberosum HOM05D006305 ORTHO05D007984 1.1e-127 460.7 374 69.3
RcHm_v2.0_Chr3g0454231 Rosa chinensis HOM05D006305 ORTHO05D007984 1.5e-126 456.8 354 67.2
TWI56G0624 Tripterygium wilfordii HOM05D006305 ORTHO05D007984 1.5e-126 456.8 369 66.1
FAN14G0751 Fragaria x ananassa HOM05D006305 ORTHO05D007984 2.0e-126 456.4 362 68.0
FAN14G5210 Fragaria x ananassa HOM05D006305 ORTHO05D007984 2.0e-126 456.4 362 68.0
Solyc03g115580.4 Solanum lycopersicum HOM05D006305 ORTHO05D007984 2.6e-126 456.1 369 68.3
Sopen03g034570 Solanum pennellii HOM05D006305 ORTHO05D007984 2.6e-126 456.1 371 72.0
Atru.chr2.472 Acer truncatum HOM05D006305 ORTHO05D007984 7.6e-126 454.5 369 65.9
FAN05G5097 Fragaria x ananassa HOM05D006305 ORTHO05D007984 2.9e-125 452.6 362 67.4
Migut.F01514 Erythranthe guttata HOM05D006305 ORTHO05D007984 4.9e-125 451.8 360 66.9
Eucgr.H04470 Eucalyptus grandis HOM05D006305 ORTHO05D007984 4.9e-125 451.8 376 71.5
GSVIVG01000016001 Vitis vinifera HOM05D006305 ORTHO05D007984 6.4e-125 451.4 359 71.9
Gorai.013G204500 Gossypium raimondii HOM05D006305 ORTHO05D007984 8.4e-125 451.1 362 72.1
SGA_v2.0_scaffold34G13953 Striga asiatica HOM05D006305 ORTHO05D007984 8.4e-125 451.1 369 69.1
FvH4_6g05460 Fragaria vesca HOM05D006305 ORTHO05D007984 1.1e-124 450.7 362 67.4
Gohir.A13G173500 Gossypium hirsutum HOM05D006305 ORTHO05D007984 1.4e-124 450.3 377 71.9
Gohir.D13G179200 Gossypium hirsutum HOM05D006305 ORTHO05D007984 1.9e-124 449.9 360 72.5
SalBow6G6985 Salvia bowleyana HOM05D006305 ORTHO05D007984 3.2e-124 449.1 373 64.3
QL03p004578 Quercus lobata HOM05D006305 ORTHO05D007984 1.2e-123 447.2 371 68.5
MD04G1208500 Malus domestica HOM05D006305 ORTHO05D007984 2.1e-123 446.4 389 67.6
EL10Ac4g09328 Beta vulgaris HOM05D006305 ORTHO05D007984 7.9e-123 444.5 370 64.1
Ca_10097_v3 Cicer arietinum L. HOM05D006305 ORTHO05D007984 1.3e-122 443.7 373 64.6
vmacro19639 Vaccinium macrocarpon HOM05D006305 ORTHO05D007984 1.3e-122 443.7 431 61.5
CiPaw.07G015100 Carya illinoinensis HOM05D006305 ORTHO05D007984 1.8e-122 443.4 380 63.2
Potri.005G036700 Populus trichocarpa HOM05D006305 ORTHO05D007984 1.8e-122 443.4 368 70.7
Sabra05G0037100 Salix brachista HOM05D006305 ORTHO05D007984 2.3e-122 443.0 381 70.3
arahy.Tifrunner.gnm1.ann1.84BFE2 Arachis hypogaea HOM05D006305 ORTHO05D007984 3.9e-122 442.2 380 72.1
TAR636G3548 Trochodendron aralioides HOM05D006305 ORTHO05D007984 3.9e-122 442.2 375 70.9
Phvul.007G181700 Phaseolus vulgaris HOM05D006305 ORTHO05D007984 6.7e-122 441.4 390 65.6
MSTRG.306 Avicennia marina HOM05D006305 ORTHO05D007984 8.7e-122 441.0 376 65.2
Lj5g0026498 Lotus japonicus HOM05D006305 ORTHO05D007984 8.7e-122 441.0 369 74.0
Medtr1g082570 Medicago truncatula HOM05D006305 ORTHO05D007984 1.9e-121 439.9 378 65.9
Hund21683 Selenicereus undatus HOM05D006305 ORTHO05D007984 3.3e-121 439.1 360 73.1
FAN05G0068 Fragaria x ananassa HOM05D006305 ORTHO05D007984 4.3e-121 438.7 362 65.7
PGR031G3204 Punica granatum HOM05D006305 ORTHO05D007984 9.6e-121 437.6 382 68.3
VMungo0720G1654 Vigna mungo HOM05D006305 ORTHO05D007984 9.6e-121 437.6 373 73.5
ClCG08G002270 Citrullus lanatus HOM05D006305 ORTHO05D007984 2.8e-120 436.0 369 64.0
Psat0ss6702g0320 Pisum sativum HOM05D006305 ORTHO05D007984 6.2e-120 434.9 375 66.7
Thecc.05G307300 Theobroma cacao HOM05D006305 ORTHO05D007984 6.2e-120 434.9 381 68.8
DCAR_029432 Daucus carota HOM05D006305 ORTHO05D007984 2.4e-119 433.0 373 68.6
arahy.Tifrunner.gnm1.ann1.39Z7HW Arachis hypogaea HOM05D006305 ORTHO05D007984 9.0e-119 431.0 380 71.3
Hma1.2p1_0666F.1_g199520 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 1.5e-118 430.3 314 73.2
Lalb_Chr02g0148341 Lupinus albus HOM05D006305 ORTHO05D007984 2.0e-118 429.9 385 70.6
Ah.06g189130 Amaranthus hybridus HOM05D006305 ORTHO05D007984 4.5e-118 428.7 380 63.2
Glyma.10G156300 Glycine max HOM05D006305 ORTHO05D007984 5.8e-118 428.3 372 64.2
Ciclev10001229m.g Citrus clementina HOM05D006305 ORTHO05D007984 1.3e-117 427.2 314 73.9
Aqoxy5G04250 Aquilegia oxysepala HOM05D006305 ORTHO05D007984 4.2e-116 422.2 371 61.5
Carub.0003s0446 Capsella rubella HOM05D006305 ORTHO05D007984 2.1e-115 419.9 373 64.9
FAN02G0061 Fragaria x ananassa HOM05D006305 ORTHO05D007984 3.5e-115 419.1 350 64.3
BcaC05g30009 Brassica carinata HOM05D006305 ORTHO05D007984 4.6e-115 418.7 355 63.4
C05p61980 Brassica napus HOM05D006305 ORTHO05D007984 4.6e-115 418.7 355 63.4
BolC5t34858H Brassica oleracea HOM05D006305 ORTHO05D007984 6.0e-115 418.3 355 63.4
ATR0620G066 Amborella trichopoda HOM05D006305 ORTHO05D007984 7.9e-115 417.9 367 62.1
BcaC05g30168 Brassica carinata HOM05D006305 ORTHO05D007984 3.0e-114 416.0 397 61.0
Prupe.6G329400 Prunus persica HOM05D006305 ORTHO05D007984 6.7e-114 414.8 262 79.4
AL3G15630 Arabidopsis lyrata HOM05D006305 ORTHO05D007984 1.9e-113 413.3 362 68.0
CDE11G1040 Ceratophyllum demersum HOM05D006305 ORTHO05D007984 1.9e-113 413.3 375 60.0
A05p42370 Brassica napus HOM05D006305 ORTHO05D007984 4.3e-113 412.1 362 63.8
BraA05t23013Z Brassica rapa HOM05D006305 ORTHO05D007984 4.3e-113 412.1 362 63.8
Thhalv10020823m.g Eutrema salsugineum HOM05D006305 ORTHO05D007984 4.3e-113 412.1 369 62.6
Sp3g04060 Schrenkiella parvula HOM05D006305 ORTHO05D007984 4.8e-112 408.7 377 59.2
Aa31LG5G15590 Aethionema arabicum HOM05D006305 ORTHO05D007984 8.2e-112 407.9 385 64.7
AUR62000888 Chenopodium quinoa HOM05D006305 ORTHO05D007984 3.1e-111 406.0 266 75.9
AUR62005086 Chenopodium quinoa HOM05D006305 ORTHO05D007984 9.0e-111 404.4 269 75.1
HPP92_015091 Vanilla planifolia HOM05D006305 ORTHO05D007984 1.5e-110 403.7 372 58.6
unitig_746.g26625 Utricularia gibba HOM05D006305 ORTHO05D007984 2.2e-109 399.8 339 64.0
COL.COLO4_19840 Corchorus olitorius HOM05D006305 ORTHO05D007984 6.5e-109 398.3 211 90.0
Nn3g18889 Nelumbo nucifera HOM05D006305 ORTHO05D007984 1.9e-108 396.7 281 81.5
THA.LOC104820089 Tarenaya hassleriana HOM05D006305 ORTHO05D007984 8.7e-106 387.9 398 56.3
BcaC05g30019 Brassica carinata HOM05D006305 ORTHO05D007984 4.3e-105 385.6 355 60.0
Cfa006552 Carpinus fangiana HOM05D006305 ORTHO05D007984 3.7e-104 382.5 294 73.5
MBI04_g21739_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 6.3e-104 381.7 263 74.9
Zm00001eb043410 Zea mays HOM05D006305 ORTHO05D007984 1.2e-102 377.5 371 57.7
Os10g0518900 Oryza sativa ssp. japonica HOM05D006305 ORTHO05D007984 1.5e-102 377.1 266 70.3
PSO782G4398 Papaver somniferum HOM05D006305 ORTHO05D007984 2.0e-102 376.7 380 59.5
MELO3C025022.2 Cucumis melo HOM05D006305 ORTHO05D007984 2.6e-102 376.3 294 67.3
CsaV3_6G002610 Cucumis sativus L. HOM05D006305 ORTHO05D007984 3.8e-101 372.5 290 67.2
PSO063G7033 Papaver somniferum HOM05D006305 ORTHO05D007984 3.2e-100 369.4 393 59.0
Sed0018566 Sechium edule HOM05D006305 ORTHO05D007984 1.4e-98 364.0 298 64.4
Haze_04230 Corylus avellana HOM05D006305 ORTHO05D007984 3.7e-96 355.9 404 57.4
SMO146G0211 Selaginella moellendorffii HOM05D006305 ORTHO05D007984 5.2e-90 335.5 204 77.9
Pp3c6_29610 Physcomitrium patens HOM05D006305 ORTHO05D007984 2.8e-88 329.7 398 48.0
Ciclev10002028m.g Citrus clementina HOM05D006305 ORTHO05D007984 2.4e-87 326.6 258 68.6
Mapoly0128s0010 Marchantia polymorpha HOM05D006305 ORTHO05D007984 3.1e-87 326.2 342 61.1
CBR_g4857 Chara braunii HOM05D006305 ORTHO05D007984 1.0e-85 321.2 266 60.5
AT3G05210 Arabidopsis thaliana HOM05D006305 ORTHO05D007984 1.3e-85 320.9 260 68.5
TPR.G22794 Trifolium pratense HOM05D006305 ORTHO05D007984 3.8e-85 319.3 220 75.9
Nitab4.5_0001211g0080 Nicotiana tabacum HOM05D006305 ORTHO05D007984 3.2e-84 316.2 384 54.2
Ciclev10003828m.g Citrus clementina HOM05D006305 ORTHO05D007984 8.8e-82 308.1 292 59.6
Hma1.2p1_0666F.1_g199530 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 2.7e-78 296.6 197 77.7
Sc16g0008400 Simmondsia chinensis HOM05D006305 ORTHO05D007984 1.0e-77 294.7 240 67.9
Duzib106G1918 Durio zibethinus HOM05D006305 ORTHO05D007984 1.1e-76 291.2 377 52.3
Cpa.g.sc1183.2 Carica papaya HOM05D006305 ORTHO05D007984 7.0e-71 271.9 361 47.1
MBI04_g44620_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 1.0e-69 268.1 140 91.4
CARHR079550 Cardamine hirsuta HOM05D006305 ORTHO05D007984 8.0e-67 258.5 140 85.0
Cre03.g196651 Chlamydomonas reinhardtii HOM05D006305 ORTHO05D007984 7.0e-63 245.4 219 55.3
AagrBONN_evm.TU.Sc2ySwM_369.531 Anthoceros agrestis HOM05D006305 ORTHO05D007984 1.6e-62 244.2 267 48.7
Ciclev10003460m.g Citrus clementina HOM05D006305 ORTHO05D007984 1.2e-57 228.0 256 54.7
Ciclev10003373m.g Citrus clementina HOM05D006305 ORTHO05D007984 4.9e-56 222.6 267 51.7
PRCOL_00003423 Prasinoderma coloniale HOM05D006305 ORTHO05D007984 1.4e-42 177.9 191 45.0
Cfa026476 Carpinus fangiana HOM05D006305 ORTHO05D007984 4.9e-40 169.5 235 37.9
MCO01G606 Micromonas commoda HOM05D006305 ORTHO05D007984 1.1e-31 141.7 192 38.5
SalBow6G3462 Salvia bowleyana HOM05D006305 ORTHO05D007984 8.1e-27 125.6 147 49.7
TPR.G7405 Trifolium pratense HOM05D006305 ORTHO05D007984 7.6e-25 119.0 158 52.5
Glyma.20G232002 Glycine max HOM05D006305 ORTHO05D007984 1.5e-17 94.7 92 60.9
Pp3c16_18520 Physcomitrium patens HOM05D006305 ORTHO05D007984 6.2e-11 72.8 43 67.4
MELO3C033326.2 Cucumis melo HOM05D006305 ORTHO05D168382 1.7e-08 64.7 34 85.3
Cpa.g.sc48.16 Carica papaya HOM05D006305 ORTHO05D007984 1.1e-07 62.0 88 42.0
MBI04_g33407_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 1.6e-06 58.2 128 41.4


User provided reference genes

Program Settings