Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G4736 Erigeron canadensis HOM05D003635 ORTHO05D004283 1.8e-176 622.5 310 100.0
ECA233G0861 Erigeron canadensis HOM05D003635 ORTHO05D004283 4.9e-57 225.7 135 81.5
Lsat_1_v5_gn_8_18261 Lactuca sativa HOM05D003635 ORTHO05D004283 1.1e-56 224.6 135 80.7
HanXRQChr14g0437201 Helianthus annuus HOM05D003635 ORTHO05D004283 7.0e-56 221.9 135 79.3
CSS0019699 Camellia sinensis var. sinensis HOM05D003635 ORTHO05D004283 2.7e-55 219.9 135 78.5
Actinidia13851 Actinidia chinensis HOM05D003635 ORTHO05D004283 4.5e-55 219.2 135 78.5
Hma1.2p1_3477F.1_g336300 Hydrangea macrophylla HOM05D003635 ORTHO05D004283 5.9e-55 218.8 135 77.8
Rhsim09G0157900 Rhododendron simsii HOM05D003635 ORTHO05D004283 5.9e-55 218.8 135 77.8
HanXRQChr08g0228691 Helianthus annuus HOM05D003635 ORTHO05D004283 7.8e-55 218.4 127 82.7
GSVIVG01005970001 Vitis vinifera HOM05D003635 ORTHO05D004283 1.3e-54 217.6 135 76.3
Lj8A91T61 Lonicera japonica HOM05D003635 ORTHO05D004283 2.3e-54 216.9 135 76.3
QL08p057820 Quercus lobata HOM05D003635 ORTHO05D004283 2.3e-54 216.9 135 76.3
arahy.Tifrunner.gnm1.ann1.T81D7J Arachis hypogaea HOM05D003635 ORTHO05D004283 3.8e-54 216.1 139 73.4
TAR369G0684 Trochodendron aralioides HOM05D003635 ORTHO05D004283 3.8e-54 216.1 135 75.6
Cfa001548 Carpinus fangiana HOM05D003635 ORTHO05D004283 5.0e-54 215.7 135 76.3
CiPaw.01G281100 Carya illinoinensis HOM05D003635 ORTHO05D004283 5.0e-54 215.7 135 74.8
CDE09G0269 Ceratophyllum demersum HOM05D003635 ORTHO05D004283 5.0e-54 215.7 135 76.3
Haze_16985 Corylus avellana HOM05D003635 ORTHO05D004283 5.0e-54 215.7 135 76.3
CiPaw.02G179700 Carya illinoinensis HOM05D003635 ORTHO05D004283 8.6e-54 214.9 135 75.6
HPP92_016710 Vanilla planifolia HOM05D003635 ORTHO05D004283 8.6e-54 214.9 135 75.6
HPP92_027161 Vanilla planifolia HOM05D003635 ORTHO05D004283 8.6e-54 214.9 135 75.6
Dinv25952 Davidia involucrata HOM05D003635 ORTHO05D004283 1.1e-53 214.5 127 79.5
Aqoxy1G01641 Aquilegia oxysepala HOM05D003635 ORTHO05D004283 1.9e-53 213.8 135 74.8
Aqoxy2G04103 Aquilegia oxysepala HOM05D003635 ORTHO05D004283 1.9e-53 213.8 135 74.8
DCAR_019162 Daucus carota HOM05D003635 ORTHO05D004283 4.3e-53 212.6 135 76.3
Prupe.2G226500 Prunus persica HOM05D003635 ORTHO05D004283 4.3e-53 212.6 135 74.1
DCAR_015231 Daucus carota HOM05D003635 ORTHO05D004283 5.6e-53 212.2 135 75.6
Gohir.A05G351700 Gossypium hirsutum HOM05D003635 ORTHO05D004283 7.3e-53 211.8 135 73.3
ClCG02G013500 Citrullus lanatus HOM05D003635 ORTHO05D004283 9.5e-53 211.5 135 74.8
MELO3C023823.2 Cucumis melo HOM05D003635 ORTHO05D004283 9.5e-53 211.5 135 74.8
CsaV3_5G006650 Cucumis sativus L. HOM05D003635 ORTHO05D004283 9.5e-53 211.5 135 74.8
FvH4_1g28630 Fragaria vesca HOM05D003635 ORTHO05D004283 9.5e-53 211.5 135 73.3
FAN19G1456 Fragaria x ananassa HOM05D003635 ORTHO05D004283 9.5e-53 211.5 135 73.3
FAN26G2866 Fragaria x ananassa HOM05D003635 ORTHO05D004283 9.5e-53 211.5 135 73.3
FAN28G1205 Fragaria x ananassa HOM05D003635 ORTHO05D004283 9.5e-53 211.5 135 73.3
Os02g0137400 Oryza sativa ssp. japonica HOM05D003635 ORTHO05D004283 9.5e-53 211.5 127 79.5
RcHm_v2.0_Chr3g0492631 Rosa chinensis HOM05D003635 ORTHO05D004283 9.5e-53 211.5 135 73.3
Oeu016870.1 Olea europaea HOM05D003635 ORTHO05D004283 1.2e-52 211.1 127 77.2
Zm00001eb231820 Zea mays HOM05D003635 ORTHO05D004283 1.2e-52 211.1 127 78.7
ATR0820G062 Amborella trichopoda HOM05D003635 ORTHO05D004283 1.6e-52 210.7 135 74.1
Cpa.g.sc1.324 Carica papaya HOM05D003635 ORTHO05D004283 1.6e-52 210.7 135 74.1
Peaxi162Scf00060g00511 Petunia axillaris HOM05D003635 ORTHO05D004283 1.6e-52 210.7 127 78.0
arahy.Tifrunner.gnm1.ann1.4JT818 Arachis hypogaea HOM05D003635 ORTHO05D004283 2.1e-52 210.3 150 68.7
CANSAT56G1536 Cannabis sativa HOM05D003635 ORTHO05D004283 2.1e-52 210.3 135 72.6
FAN23G1337 Fragaria x ananassa HOM05D003635 ORTHO05D004283 2.1e-52 210.3 135 72.6
FAN23G3063 Fragaria x ananassa HOM05D003635 ORTHO05D004283 2.1e-52 210.3 135 72.6
Nn2g12856 Nelumbo nucifera HOM05D003635 ORTHO05D004283 2.1e-52 210.3 135 74.1
SalBow7G2745 Salvia bowleyana HOM05D003635 ORTHO05D004283 2.1e-52 210.3 127 78.7
SGA_v2.0_scaffold364G49990 Striga asiatica HOM05D003635 ORTHO05D004283 2.1e-52 210.3 127 78.0
MSTRG.22089 Avicennia marina HOM05D003635 ORTHO05D004283 2.8e-52 209.9 127 76.4
Duzib128G1000 Durio zibethinus HOM05D003635 ORTHO05D004283 2.8e-52 209.9 131 74.0
Medtr1g115525 Medicago truncatula HOM05D003635 ORTHO05D004283 2.8e-52 209.9 135 72.6
PSO339G2718 Papaver somniferum HOM05D003635 ORTHO05D004283 2.8e-52 209.9 135 71.9
PSO384G4083 Papaver somniferum HOM05D003635 ORTHO05D004283 2.8e-52 209.9 135 71.9
Phvul.007G009600 Phaseolus vulgaris HOM05D003635 ORTHO05D004283 2.8e-52 209.9 135 74.1
PGSC0003DMG400030187 Solanum tuberosum HOM05D003635 ORTHO05D004283 2.8e-52 209.9 127 77.2
VMungo0720G0614 Vigna mungo HOM05D003635 ORTHO05D004283 2.8e-52 209.9 135 74.1
Glyma.20G240500 Glycine max HOM05D003635 ORTHO05D004283 3.6e-52 209.5 135 73.3
Gorai.012G068000 Gossypium raimondii HOM05D003635 ORTHO05D004283 3.6e-52 209.5 135 72.6
Nitab4.5_0000426g0110 Nicotiana tabacum HOM05D003635 ORTHO05D004283 3.6e-52 209.5 127 78.0
Nitab4.5_0012497g0010 Nicotiana tabacum HOM05D003635 ORTHO05D004283 3.6e-52 209.5 127 78.0
CAN.G1557.8 Capsicum annuum HOM05D003635 ORTHO05D004283 4.7e-52 209.1 127 77.2
MD01G1119800 Malus domestica HOM05D003635 ORTHO05D004283 4.7e-52 209.1 135 71.9
Potri.008G048900 Populus trichocarpa HOM05D003635 ORTHO05D004283 4.7e-52 209.1 135 74.1
Solyc04g010260.3 Solanum lycopersicum HOM05D003635 ORTHO05D004283 4.7e-52 209.1 127 77.2
Sopen04g005450 Solanum pennellii HOM05D003635 ORTHO05D004283 4.7e-52 209.1 127 77.2
THA.LOC104824257 Tarenaya hassleriana HOM05D003635 ORTHO05D004283 4.7e-52 209.1 135 74.1
unitig_736.g22269 Utricularia gibba HOM05D003635 ORTHO05D004283 4.7e-52 209.1 127 78.7
Ca_11305_v3 Cicer arietinum L. HOM05D003635 ORTHO05D004283 6.1e-52 208.8 135 71.9
Glyma.10G291300 Glycine max HOM05D003635 ORTHO05D004283 8.0e-52 208.4 135 73.3
Eucgr.J01165 Eucalyptus grandis HOM05D003635 ORTHO05D004283 1.0e-51 208.0 127 77.2
Lj5g0001158 Lotus japonicus HOM05D003635 ORTHO05D004283 1.0e-51 208.0 135 72.6
SGA_v2.0_scaffold54G19634 Striga asiatica HOM05D003635 ORTHO05D004283 1.0e-51 208.0 127 76.4
Gohir.A10G210700 Gossypium hirsutum HOM05D003635 ORTHO05D004283 1.4e-51 207.6 135 73.3
Gohir.D10G219000 Gossypium hirsutum HOM05D003635 ORTHO05D004283 1.4e-51 207.6 135 73.3
Gorai.011G245700 Gossypium raimondii HOM05D003635 ORTHO05D004283 1.4e-51 207.6 135 73.3
PGR142G3382 Punica granatum HOM05D003635 ORTHO05D004283 1.4e-51 207.6 127 78.0
Thecc.10G059000 Theobroma cacao HOM05D003635 ORTHO05D004283 1.8e-51 207.2 135 72.6
COL.COLO4_10911 Corchorus olitorius HOM05D003635 ORTHO05D004283 3.0e-51 206.5 135 72.6
Carub.0005s2188 Capsella rubella HOM05D003635 ORTHO05D004283 4.0e-51 206.1 129 76.0
Ciclev10030532m.g Citrus clementina HOM05D003635 ORTHO05D004283 4.0e-51 206.1 135 73.3
FAN03G1481 Fragaria x ananassa HOM05D003635 ORTHO05D004283 4.0e-51 206.1 132 73.5
Manes.07G109100 Manihot esculenta HOM05D003635 ORTHO05D004283 4.0e-51 206.1 135 71.9
Medtr4g115500 Medicago truncatula HOM05D003635 ORTHO05D004283 4.0e-51 206.1 135 71.9
Nn2g10520 Nelumbo nucifera HOM05D003635 ORTHO05D004283 4.0e-51 206.1 127 77.2
BcaB02g07694 Brassica carinata HOM05D003635 ORTHO05D004283 5.2e-51 205.7 135 72.6
BcaC09g48162 Brassica carinata HOM05D003635 ORTHO05D004283 5.2e-51 205.7 135 72.6
BolC1t05325H Brassica oleracea HOM05D003635 ORTHO05D004283 5.2e-51 205.7 135 72.6
BraA01t04192Z Brassica rapa HOM05D003635 ORTHO05D004283 5.2e-51 205.7 135 72.6
Gohir.D04G061100 Gossypium hirsutum HOM05D003635 ORTHO05D004283 5.2e-51 205.7 128 74.2
Lalb_Chr06g0164191 Lupinus albus HOM05D003635 ORTHO05D004283 5.2e-51 205.7 127 74.8
Sp5g07240 Schrenkiella parvula HOM05D003635 ORTHO05D004283 5.2e-51 205.7 135 72.6
Sed0026990 Sechium edule HOM05D003635 ORTHO05D004283 5.2e-51 205.7 135 73.3
Hund19994 Selenicereus undatus HOM05D003635 ORTHO05D004283 5.2e-51 205.7 135 73.3
CARHR289060 Cardamine hirsuta HOM05D003635 ORTHO05D004283 6.8e-51 205.3 135 71.9
FAN06G2419 Fragaria x ananassa HOM05D003635 ORTHO05D004283 6.8e-51 205.3 132 72.7
FAN06G4735 Fragaria x ananassa HOM05D003635 ORTHO05D004283 6.8e-51 205.3 132 72.7
Thhalv10006588m.g Eutrema salsugineum HOM05D003635 ORTHO05D004283 8.9e-51 204.9 135 71.1
Lalb_Chr02g0143971 Lupinus albus HOM05D003635 ORTHO05D004283 8.9e-51 204.9 127 74.0
Duzib114G0516 Durio zibethinus HOM05D003635 ORTHO05D004283 1.2e-50 204.5 135 71.1
FvH4_7g20980 Fragaria vesca HOM05D003635 ORTHO05D004283 1.2e-50 204.5 132 72.7
FAN10G2700 Fragaria x ananassa HOM05D003635 ORTHO05D004283 1.2e-50 204.5 132 72.0
TPR.G13999 Trifolium pratense HOM05D003635 ORTHO05D004283 1.2e-50 204.5 135 70.4
AL5G36324 Arabidopsis lyrata HOM05D003635 ORTHO05D004283 1.5e-50 204.1 135 71.1
AL5G36340 Arabidopsis lyrata HOM05D003635 ORTHO05D004283 1.5e-50 204.1 135 71.1
AT3G55200 Arabidopsis thaliana HOM05D003635 ORTHO05D004283 1.5e-50 204.1 135 71.1
AT3G55220 Arabidopsis thaliana HOM05D003635 ORTHO05D004283 1.5e-50 204.1 135 71.1
Migut.N02978 Erythranthe guttata HOM05D003635 ORTHO05D004283 1.5e-50 204.1 127 74.0
Medtr4g115810 Medicago truncatula HOM05D003635 ORTHO05D004283 1.5e-50 204.1 135 70.4
Manes.10G036500 Manihot esculenta HOM05D003635 ORTHO05D004283 2.6e-50 203.4 135 71.9
Sc06g0001910 Simmondsia chinensis HOM05D003635 ORTHO05D004283 2.6e-50 203.4 135 71.9
Ah.09g234270 Amaranthus hybridus HOM05D003635 ORTHO05D004283 3.4e-50 203.0 135 71.9
AUR62022537 Chenopodium quinoa HOM05D003635 ORTHO05D004283 3.4e-50 203.0 135 71.9
AUR62035965 Chenopodium quinoa HOM05D003635 ORTHO05D004283 3.4e-50 203.0 135 71.9
Potri.010G212100 Populus trichocarpa HOM05D003635 ORTHO05D004283 4.4e-50 202.6 135 71.1
THA.LOC104810010 Tarenaya hassleriana HOM05D003635 ORTHO05D004283 4.4e-50 202.6 135 73.3
AagrBONN_evm.TU.Sc2ySwM_368.1182 Anthoceros agrestis HOM05D003635 ORTHO05D004283 5.8e-50 202.2 135 70.4
EL10Ac2g03470 Beta vulgaris HOM05D003635 ORTHO05D004283 5.8e-50 202.2 135 71.9
Atru.chr12.571 Acer truncatum HOM05D003635 ORTHO05D004283 7.5e-50 201.8 135 71.9
Aa31LG10G9870 Aethionema arabicum HOM05D003635 ORTHO05D004283 1.3e-49 201.1 135 70.4
AagrBONN_evm.TU.Sc2ySwM_362.982 Anthoceros agrestis HOM05D003635 ORTHO05D004283 1.7e-49 200.7 135 69.6
Mapoly0009s0019 Marchantia polymorpha HOM05D003635 ORTHO05D004283 1.7e-49 200.7 127 74.0
Psat7g159960 Pisum sativum HOM05D003635 ORTHO05D004283 2.9e-49 199.9 135 69.6
Actinidia02986 Actinidia chinensis HOM05D003635 ORTHO05D004283 3.7e-49 199.5 137 71.5
SEGI_11055 Sequoiadendron giganteum HOM05D003635 ORTHO05D004283 6.4e-49 198.7 135 69.6
Pp3c12_11240 Physcomitrium patens HOM05D003635 ORTHO05D004283 8.3e-49 198.4 146 65.8
Pp3c16_16800 Physcomitrium patens HOM05D003635 ORTHO05D004283 1.4e-48 197.6 146 65.1
TWI63G0503 Tripterygium wilfordii HOM05D003635 ORTHO05D004283 3.2e-48 196.4 127 71.7
Pp3c4_5190 Physcomitrium patens HOM05D003635 ORTHO05D004283 4.1e-48 196.1 146 64.4
SMO116G0157 Selaginella moellendorffii HOM05D003635 ORTHO05D004283 2.0e-47 193.7 135 67.4
AUR62044277 Chenopodium quinoa HOM05D003635 ORTHO05D004283 8.6e-46 188.3 122 72.1
AUR62002616 Chenopodium quinoa HOM05D003635 ORTHO05D004283 1.1e-45 188.0 129 69.8
CBR_g32401 Chara braunii HOM05D003635 ORTHO05D004283 4.3e-45 186.0 127 68.5
Medtr6g013290 Medicago truncatula HOM05D003635 ORTHO05D004283 3.9e-38 162.9 127 63.8
AUR62023868 Chenopodium quinoa HOM05D003635 ORTHO05D004283 3.6e-36 156.4 127 55.9
Psat5g199040 Pisum sativum HOM05D003635 ORTHO05D004283 6.4e-33 145.6 135 54.8
CDE02G0853 Ceratophyllum demersum HOM05D003635 ORTHO05D004283 2.4e-32 143.7 91 78.0
Carub.0005s2186 Capsella rubella HOM05D003635 ORTHO05D004283 2.3e-30 137.1 91 73.6
MCO14G333 Micromonas commoda HOM05D003635 ORTHO05D004283 3.0e-30 136.7 131 48.9
Cc00_g13950 Coffea canephora HOM05D003635 ORTHO05D004283 8.6e-30 135.2 91 72.5
Psat7g159880 Pisum sativum HOM05D003635 ORTHO05D004283 1.5e-29 134.4 91 71.4
HanXRQChr08g0234771 Helianthus annuus HOM05D003635 ORTHO05D004283 2.1e-28 130.6 90 66.7
PRCOL_00000086 Prasinoderma coloniale HOM05D003635 ORTHO05D004283 1.8e-27 127.5 122 50.0
Rhsim09G0158100 Rhododendron simsii HOM05D003635 ORTHO05D004283 2.4e-27 127.1 89 69.7
Cre08.g372800 Chlamydomonas reinhardtii HOM05D003635 ORTHO05D004283 6.8e-27 125.6 127 44.1
Actinidia29205 Actinidia chinensis HOM05D003635 ORTHO05D004283 3.4e-26 123.2 67 88.1
Dinv31402 Davidia involucrata HOM05D003635 ORTHO05D004283 2.9e-25 120.2 82 67.1
Psat6g237600 Pisum sativum HOM05D003635 ORTHO05D004283 3.5e-23 113.2 70 71.4
Cc00_g29200 Coffea canephora HOM05D003635 ORTHO05D004283 2.4e-19 100.5 139 45.3
MD07G1189000 Malus domestica HOM05D003635 ORTHO05D004283 2.4e-19 100.5 139 45.3
Sabra08G0035000 Salix brachista HOM05D003635 ORTHO05D004283 2.4e-19 100.5 139 46.0
Haze_26580 Corylus avellana HOM05D003635 ORTHO05D004283 4.0e-19 99.8 125 38.4
TPR.G14006 Trifolium pratense HOM05D003635 ORTHO05D004283 2.0e-18 97.4 139 43.9
FAN28G1684 Fragaria x ananassa HOM05D003635 ORTHO05D004283 2.2e-17 94.0 139 42.4
HPP92_016709 Vanilla planifolia HOM05D003635 ORTHO05D004283 3.8e-17 93.2 144 41.7
EL10Ac3g06633 Beta vulgaris HOM05D003635 ORTHO05D004283 4.6e-15 86.3 51 74.5
FAN01G1416 Fragaria x ananassa HOM05D000005 ORTHO05D004283 3.3e-13 80.1 140 39.3
AUR62002317 Chenopodium quinoa HOM05D003635 ORTHO05D004283 2.8e-12 77.0 135 41.5
VMungo1215G3139 Vigna mungo HOM05D003635 ORTHO05D004283 1.2e-10 71.6 49 65.3
Sabra10G0164200 Salix brachista HOM05D003635 ORTHO05D004283 3.8e-09 66.6 108 40.7
CDE02G2560 Ceratophyllum demersum HOM05D003635 ORTHO05D004283 1.1e-08 65.1 87 46.0


User provided reference genes

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