Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G4415 Erigeron canadensis HOM05D005334 ORTHO05D006560 1.4e-207 726.1 368 100.0
HanXRQChr08g0226671 Helianthus annuus HOM05D005334 ORTHO05D006560 1.3e-181 639.8 361 89.5
Hma1.2p1_0964F.1_g242010 Hydrangea macrophylla HOM05D005334 ORTHO05D006560 3.1e-159 565.5 379 76.0
Rhsim04G0113300 Rhododendron simsii HOM05D005334 ORTHO05D006560 1.6e-152 543.1 367 74.9
Actinidia05483 Actinidia chinensis HOM05D005334 ORTHO05D006560 2.4e-151 539.3 363 73.8
GSVIVG01003946001 Vitis vinifera HOM05D005334 ORTHO05D006560 2.9e-149 532.3 363 73.8
vmacro09003 Vaccinium macrocarpon HOM05D005334 ORTHO05D006560 4.9e-149 531.6 363 74.9
CiPaw.07G045200 Carya illinoinensis HOM05D005334 ORTHO05D006560 8.4e-149 530.8 368 72.8
Cfa006855 Carpinus fangiana HOM05D005334 ORTHO05D006560 1.6e-147 526.6 363 72.2
Prupe.1G076500 Prunus persica HOM05D005334 ORTHO05D006560 2.7e-147 525.8 361 71.7
CsaV3_6G044840 Cucumis sativus L. HOM05D005334 ORTHO05D006560 4.6e-147 525.0 362 72.4
MELO3C007703.2 Cucumis melo HOM05D005334 ORTHO05D006560 2.3e-146 522.7 366 71.9
FAN26G1496 Fragaria x ananassa HOM05D005334 ORTHO05D006560 3.0e-146 522.3 362 72.1
QL06p036434 Quercus lobata HOM05D005334 ORTHO05D006560 3.0e-146 522.3 362 74.0
ClCG01G018260 Citrullus lanatus HOM05D005334 ORTHO05D006560 5.1e-146 521.5 362 72.4
Thecc.10G018300 Theobroma cacao HOM05D005334 ORTHO05D006560 6.6e-146 521.2 363 73.8
MD01G1042400 Malus domestica HOM05D005334 ORTHO05D006560 8.7e-146 520.8 363 72.5
Haze_03908 Corylus avellana HOM05D005334 ORTHO05D006560 1.1e-145 520.4 356 72.8
FvH4_1g19290 Fragaria vesca HOM05D005334 ORTHO05D006560 1.1e-145 520.4 362 72.7
CANSAT01G0836 Cannabis sativa HOM05D005334 ORTHO05D006560 1.9e-145 519.6 361 73.1
RcHm_v2.0_Chr6g0270401 Rosa chinensis HOM05D005334 ORTHO05D006560 1.9e-145 519.6 362 72.1
Lsat_1_v5_gn_6_15620 Lactuca sativa HOM05D005334 ORTHO05D006560 2.5e-145 519.2 361 77.8
Peaxi162Scf00085g00115 Petunia axillaris HOM05D005334 ORTHO05D006560 9.6e-145 517.3 362 72.1
CAN.G1813.2 Capsicum annuum HOM05D005334 ORTHO05D006560 1.3e-144 516.9 362 72.9
FvH4_7g07230 Fragaria vesca HOM05D005334 ORTHO05D006560 1.3e-144 516.9 363 71.9
RcHm_v2.0_Chr6g0270301 Rosa chinensis HOM05D005334 ORTHO05D006560 2.1e-144 516.2 361 71.7
Nitab4.5_0000402g0140 Nicotiana tabacum HOM05D005334 ORTHO05D006560 2.8e-144 515.8 362 71.5
Sed0026061 Sechium edule HOM05D005334 ORTHO05D006560 6.2e-144 514.6 365 72.3
Sopen11g005690 Solanum pennellii HOM05D005334 ORTHO05D006560 6.2e-144 514.6 362 71.0
FAN23G0357 Fragaria x ananassa HOM05D005334 ORTHO05D006560 3.1e-143 512.3 362 71.3
FAN23G0783 Fragaria x ananassa HOM05D005334 ORTHO05D006560 3.1e-143 512.3 362 71.3
TWI34G1275 Tripterygium wilfordii HOM05D005334 ORTHO05D006560 3.1e-143 512.3 363 72.2
CSS0002721 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 4.0e-143 511.9 335 74.3
Gorai.008G084700 Gossypium raimondii HOM05D005334 ORTHO05D006560 9.0e-143 510.8 362 73.2
Cc07_g13790 Coffea canephora HOM05D005334 ORTHO05D006560 1.2e-142 510.4 363 72.2
Gohir.D12G076300 Gossypium hirsutum HOM05D005334 ORTHO05D006560 1.2e-142 510.4 362 72.7
CiPaw.07G045000 Carya illinoinensis HOM05D005334 ORTHO05D006560 1.5e-142 510.0 365 71.8
Potri.010G189500 Populus trichocarpa HOM05D005334 ORTHO05D006560 2.6e-142 509.2 363 70.2
Solyc11g010950.2 Solanum lycopersicum HOM05D005334 ORTHO05D006560 4.5e-142 508.4 362 70.7
Sc03g0000510 Simmondsia chinensis HOM05D005334 ORTHO05D006560 5.8e-142 508.1 370 70.3
Duzib128G0185 Durio zibethinus HOM05D005334 ORTHO05D006560 2.2e-141 506.1 373 70.2
PGSC0003DMG400016186 Solanum tuberosum HOM05D005334 ORTHO05D006560 2.2e-141 506.1 362 70.7
TAR625G0036 Trochodendron aralioides HOM05D005334 ORTHO05D006560 1.1e-140 503.8 361 71.7
Eucgr.A00094 Eucalyptus grandis HOM05D005334 ORTHO05D006560 1.6e-139 500.0 361 70.4
PSO700G0130 Papaver somniferum HOM05D005334 ORTHO05D006560 7.9e-139 497.7 363 68.9
PSO832G1169 Papaver somniferum HOM05D005334 ORTHO05D006560 1.3e-138 496.9 361 69.5
Ca_14799_v3 Cicer arietinum L. HOM05D005334 ORTHO05D006560 3.9e-138 495.4 370 70.3
Ciclev10008278m.g Citrus clementina HOM05D005334 ORTHO05D006560 3.9e-138 495.4 369 69.1
SGA_v2.0_scaffold45G17221 Striga asiatica HOM05D005334 ORTHO05D006560 5.1e-138 495.0 363 69.4
SalBow5G3116 Salvia bowleyana HOM05D005334 ORTHO05D006560 8.7e-138 494.2 360 70.8
MSTRG.3723 Avicennia marina HOM05D005334 ORTHO05D006560 1.1e-137 493.8 364 69.2
SalBow5G4670 Salvia bowleyana HOM05D005334 ORTHO05D006560 1.1e-137 493.8 360 70.8
Medtr8g007340 Medicago truncatula HOM05D005334 ORTHO05D006560 1.5e-137 493.4 369 70.2
Sabra10G0146100 Salix brachista HOM05D005334 ORTHO05D006560 1.5e-137 493.4 384 66.1
Phvul.010G046100 Phaseolus vulgaris HOM05D005334 ORTHO05D006560 2.8e-136 489.2 363 68.9
arahy.Tifrunner.gnm1.ann1.DY9T0P Arachis hypogaea HOM05D005334 ORTHO05D006560 3.7e-136 488.8 362 69.6
arahy.Tifrunner.gnm1.ann1.D5QNLH Arachis hypogaea HOM05D005334 ORTHO05D006560 6.2e-136 488.0 362 69.6
Nn5g29815 Nelumbo nucifera HOM05D005334 ORTHO05D006560 6.2e-136 488.0 363 69.1
PSO761G0425 Papaver somniferum HOM05D005334 ORTHO05D006560 6.2e-136 488.0 364 68.7
Glyma.13G008300 Glycine max HOM05D005334 ORTHO05D006560 8.1e-136 487.6 362 68.5
Psat4g223080 Pisum sativum HOM05D005334 ORTHO05D006560 1.8e-135 486.5 370 69.2
Manes.10G013400 Manihot esculenta HOM05D005334 ORTHO05D006560 4.0e-135 485.3 363 68.9
Phvul.010G045900 Phaseolus vulgaris HOM05D005334 ORTHO05D006560 6.9e-135 484.6 363 68.3
Lj3g0001207 Lotus japonicus HOM05D005334 ORTHO05D006560 3.4e-134 482.3 362 68.5
AUR62003692 Chenopodium quinoa HOM05D005334 ORTHO05D006560 7.6e-134 481.1 372 67.2
Ciclev10008715m.g Citrus clementina HOM05D005334 ORTHO05D006560 1.7e-133 479.9 366 67.5
Aqoxy6G01573 Aquilegia oxysepala HOM05D005334 ORTHO05D006560 4.9e-133 478.4 357 69.2
CiPaw.07G049700 Carya illinoinensis HOM05D005334 ORTHO05D006560 4.2e-132 475.3 367 67.6
VMungo0331G1245 Vigna mungo HOM05D005334 ORTHO05D006560 5.5e-132 474.9 362 67.1
AUR62018003 Chenopodium quinoa HOM05D005334 ORTHO05D006560 3.0e-130 469.2 394 62.4
Lalb_Chr12g0210501 Lupinus albus HOM05D005334 ORTHO05D006560 3.0e-130 469.2 356 68.3
Lj2C525G9 Lonicera japonica HOM05D005334 ORTHO05D006560 5.1e-130 468.4 364 69.2
Migut.K00814 Erythranthe guttata HOM05D005334 ORTHO05D006560 4.3e-129 465.3 361 66.8
PGR031G2068 Punica granatum HOM05D005334 ORTHO05D006560 7.4e-129 464.5 368 64.1
FAN19G2596 Fragaria x ananassa HOM05D005334 ORTHO05D006560 9.6e-129 464.2 362 67.7
CiPaw.07G044700 Carya illinoinensis HOM05D005334 ORTHO05D006560 3.7e-128 462.2 360 66.1
CARHR085780 Cardamine hirsuta HOM05D005334 ORTHO05D006560 1.4e-127 460.3 359 67.1
Thhalv10021017m.g Eutrema salsugineum HOM05D005334 ORTHO05D006560 1.5e-126 456.8 362 65.5
COL.COLO4_25710 Corchorus olitorius HOM05D005334 ORTHO05D006560 1.0e-125 454.1 308 73.7
THA.LOC104816551 Tarenaya hassleriana HOM05D005334 ORTHO05D006560 2.2e-125 453.0 359 66.3
BcaC05g29390 Brassica carinata HOM05D005334 ORTHO05D006560 1.1e-124 450.7 360 66.1
Sp3g09500 Schrenkiella parvula HOM05D005334 ORTHO05D006560 1.9e-124 449.9 359 65.5
A05p38080 Brassica napus HOM05D005334 ORTHO05D006560 2.5e-124 449.5 361 65.9
Carub.0003s1053 Capsella rubella HOM05D005334 ORTHO05D006560 2.5e-124 449.5 370 65.1
Aa31LG3G4530 Aethionema arabicum HOM05D005334 ORTHO05D006560 4.2e-124 448.7 363 65.0
BraA05t22600Z Brassica rapa HOM05D005334 ORTHO05D006560 1.2e-123 447.2 361 65.9
C05p56870 Brassica napus HOM05D005334 ORTHO05D006560 1.6e-123 446.8 361 65.9
PSO013G0112 Papaver somniferum HOM05D005334 ORTHO05D006560 3.5e-123 445.7 320 70.6
AT3G11220 Arabidopsis thaliana HOM05D005334 ORTHO05D006560 1.0e-122 444.1 369 65.0
BolC5t34351H Brassica oleracea HOM05D005334 ORTHO05D006560 2.5e-121 439.5 386 62.2
Os06g0639600 Oryza sativa ssp. japonica HOM05D005334 ORTHO05D006560 4.3e-121 438.7 378 61.4
AL3G22740 Arabidopsis lyrata HOM05D005334 ORTHO05D006560 9.7e-121 437.6 376 64.4
Cpa.g.sc19.179 Carica papaya HOM05D005334 ORTHO05D006560 6.5e-117 424.9 363 62.8
Zm00001eb387250 Zea mays HOM05D005334 ORTHO05D006560 2.3e-114 416.4 368 60.3
Ah.02g123390 Amaranthus hybridus HOM05D005334 ORTHO05D006560 5.1e-114 415.2 363 60.9
Atru.chr12.1050 Acer truncatum HOM05D005334 ORTHO05D006560 1.5e-113 413.7 334 65.0
unitig_0.g2648 Utricularia gibba HOM05D005334 ORTHO05D006560 1.3e-112 410.6 375 58.9
CDE04G2384 Ceratophyllum demersum HOM05D005334 ORTHO05D006560 2.4e-111 406.4 368 59.0
Dinv36960 Davidia involucrata HOM05D005334 ORTHO05D006560 6.9e-111 404.8 286 72.7
Hund14075 Selenicereus undatus HOM05D005334 ORTHO05D006560 2.7e-107 392.9 363 58.4
SHI03443 Sapria himalayana HOM05D005334 ORTHO05D006560 3.6e-107 392.5 354 59.0
SEGI_17743 Sequoiadendron giganteum HOM05D005334 ORTHO05D006560 2.3e-106 389.8 385 52.5
MBI10_g34777_MAGBIO Magnolia biondii HOM05D005334 ORTHO05D006560 6.7e-106 388.3 341 59.5
Glyma.03G108600 Glycine max HOM05D005334 ORTHO05D006560 1.5e-105 387.1 299 64.5
FAN03G2380 Fragaria x ananassa HOM05D005334 ORTHO05D006560 7.7e-102 374.8 376 55.9
ATR1153G009 Amborella trichopoda HOM05D005334 ORTHO05D006560 1.3e-96 357.5 308 58.1
Lsat_1_v5_gn_4_105120 Lactuca sativa HOM05D005334 ORTHO05D006560 7.7e-94 348.2 210 82.4
Gohir.A12G078265 Gossypium hirsutum HOM05D005334 ORTHO05D006560 1.2e-91 340.9 245 72.2
Pp3c9_23940 Physcomitrium patens HOM05D005334 ORTHO05D006560 5.3e-87 325.5 376 46.0
Mapoly0006s0234 Marchantia polymorpha HOM05D005334 ORTHO05D006560 5.0e-85 318.9 366 45.9
Dinv27014 Davidia involucrata HOM05D005334 ORTHO05D006560 4.4e-81 305.8 214 69.6
AagrBONN_evm.TU.Sc2ySwM_117.1770 Anthoceros agrestis HOM05D005334 ORTHO05D006560 4.1e-79 299.3 420 42.6
Lsat_1_v5_gn_8_12861 Lactuca sativa HOM05D005334 ORTHO05D006560 6.6e-77 292.0 157 90.4
DCAR_003438 Daucus carota HOM05D005334 ORTHO05D006560 2.2e-72 276.9 304 51.6
Thecc.09G278800 Theobroma cacao HOM05D005334 ORTHO05D006560 8.3e-72 275.0 275 54.5
Lsat_1_v5_gn_5_29040 Lactuca sativa HOM05D005334 ORTHO05D006560 1.4e-71 274.2 194 72.7
Prupe.6G206700 Prunus persica HOM05D005334 ORTHO05D006560 1.6e-70 270.8 364 47.3
TPR.G5292 Trifolium pratense HOM05D005334 ORTHO05D006560 5.6e-68 262.3 174 76.4
Lj2g0000099 Lotus japonicus HOM05D005334 ORTHO05D006560 3.4e-65 253.1 173 73.4
BcaB06g25638 Brassica carinata HOM05D005334 ORTHO05D006560 1.4e-58 231.1 198 66.2
Lsat_1_v5_gn_4_67481 Lactuca sativa HOM05D005334 ORTHO05D006560 4.0e-58 229.6 141 83.7
TPR.G11130 Trifolium pratense HOM05D005334 ORTHO05D006560 4.9e-56 222.6 198 59.6
Lj6g0009802 Lotus japonicus HOM05D005334 ORTHO05D006560 1.1e-55 221.5 195 59.5
CSS0046374 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 1.4e-50 204.5 123 84.6
CSS0016906 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 3.4e-49 199.9 123 82.9
Lsat_1_v5_gn_1_79261 Lactuca sativa HOM05D005334 ORTHO05D006560 7.5e-49 198.7 141 74.5
MD01G1042700 Malus domestica HOM05D005334 ORTHO05D006560 5.1e-45 186.0 166 62.7
CiPaw.07G044400 Carya illinoinensis HOM05D005334 ORTHO05D006560 6.6e-45 185.7 139 67.6
RcHm_v2.0_Chr2g0110581 Rosa chinensis HOM05D005334 ORTHO05D006560 6.2e-43 179.1 305 38.7
SMO146G0066 Selaginella moellendorffii HOM05D005334 ORTHO05D006560 2.4e-42 177.2 249 42.6
CSS0017464 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 1.4e-39 167.9 123 74.0
ATR0022G031 Amborella trichopoda HOM05D005334 ORTHO05D006560 5.1e-37 159.5 142 64.1
SEGI_40300 Sequoiadendron giganteum HOM05D005334 ORTHO05D006560 6.9e-34 149.1 177 44.6
CSS0026696 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 2.4e-26 124.0 72 81.9
HPP92_008022 Vanilla planifolia HOM05D005334 ORTHO05D006560 2.4e-26 124.0 114 54.4
MBI03_g45376_MAGBIO Magnolia biondii HOM05D005334 ORTHO05D006560 1.7e-24 117.9 82 69.5
Cre03.g196000 Chlamydomonas reinhardtii HOM05D005334 ORTHO05D006560 3.3e-20 103.6 386 23.8
HPP92_008021 Vanilla planifolia HOM05D005334 ORTHO05D006560 5.6e-20 102.8 73 74.0
MBI03_g46739_MAGBIO Magnolia biondii HOM05D005334 ORTHO05D006560 3.7e-19 100.1 77 61.0
CBR_g30786 Chara braunii HOM05D000019 ORTHO05D000002 8.4e-16 89.0 142 34.5
MCO12G220 Micromonas commoda HOM05D005334 ORTHO05D006560 7.9e-14 82.4 417 23.3


User provided reference genes

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