Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G3768 Erigeron canadensis HOM05D007027 ORTHO05D008765 4.4e-200 701.0 349 100.0
HanXRQChr09g0249131 Helianthus annuus HOM05D007027 ORTHO05D008765 1.3e-151 540.0 314 86.6
FvH4_3g33250 Fragaria vesca HOM05D007027 ORTHO05D008765 3.0e-132 475.7 344 70.9
GSVIVG01023249001 Vitis vinifera HOM05D007027 ORTHO05D008765 1.2e-131 473.8 356 68.8
MD15G1435400 Malus domestica HOM05D007027 ORTHO05D008765 2.0e-131 473.0 345 71.3
FAN25G1584 Fragaria x ananassa HOM05D007027 ORTHO05D008765 4.4e-131 471.9 343 70.3
Gohir.D01G174800 Gossypium hirsutum HOM05D007027 ORTHO05D008765 1.7e-130 469.9 326 72.7
PGSC0003DMG400024892 Solanum tuberosum HOM05D007027 ORTHO05D008765 2.8e-130 469.2 374 66.6
Cfa004487 Carpinus fangiana HOM05D007027 ORTHO05D008765 6.3e-130 468.0 369 66.1
RcHm_v2.0_Chr5g0060601 Rosa chinensis HOM05D007027 ORTHO05D008765 8.3e-130 467.6 343 70.0
TAR381G1092 Trochodendron aralioides HOM05D007027 ORTHO05D008765 1.1e-129 467.2 305 75.1
Cc02_g23170 Coffea canephora HOM05D007027 ORTHO05D008765 1.4e-129 466.8 372 66.7
Gorai.002G216900 Gossypium raimondii HOM05D007027 ORTHO05D008765 2.4e-129 466.1 326 72.4
Lj5C266T4 Lonicera japonica HOM05D007027 ORTHO05D008765 3.1e-129 465.7 357 69.7
CiPaw.05G004800 Carya illinoinensis HOM05D007027 ORTHO05D008765 4.1e-129 465.3 358 67.9
FAN16G3401 Fragaria x ananassa HOM05D007027 ORTHO05D008765 4.1e-129 465.3 348 69.0
CSS0028981 Camellia sinensis var. sinensis HOM05D007027 ORTHO05D008765 5.4e-129 464.9 364 65.7
MD08G1241400 Malus domestica HOM05D007027 ORTHO05D008765 5.4e-129 464.9 312 74.4
Duzib132G0056 Durio zibethinus HOM05D007027 ORTHO05D008765 7.0e-129 464.5 355 67.9
Solyc01g103560.3 Solanum lycopersicum HOM05D007027 ORTHO05D008765 7.0e-129 464.5 374 65.8
CiPaw.06G173600 Carya illinoinensis HOM05D007027 ORTHO05D008765 1.2e-128 463.8 357 66.7
Cpa.g.sc113.45 Carica papaya HOM05D007027 ORTHO05D008765 2.7e-128 462.6 321 71.3
CsaV3_5G029790 Cucumis sativus L. HOM05D007027 ORTHO05D008765 2.7e-128 462.6 335 69.3
THA.LOC104816809 Tarenaya hassleriana HOM05D007027 ORTHO05D008765 2.7e-128 462.6 356 66.9
QL02p100436 Quercus lobata HOM05D007027 ORTHO05D008765 4.5e-128 461.8 323 72.4
Sopen01g045910 Solanum pennellii HOM05D007027 ORTHO05D008765 5.9e-128 461.5 374 65.5
Dinv07482 Davidia involucrata HOM05D007027 ORTHO05D008765 1.3e-127 460.3 325 71.4
Nitab4.5_0000787g0210 Nicotiana tabacum HOM05D007027 ORTHO05D008765 1.7e-127 459.9 323 71.8
CAN.G855.3 Capsicum annuum HOM05D007027 ORTHO05D008765 2.2e-127 459.5 368 65.5
PGR142G1179 Punica granatum HOM05D007027 ORTHO05D008765 5.0e-127 458.4 350 67.4
Manes.07G024000 Manihot esculenta HOM05D007027 ORTHO05D008765 1.1e-126 457.2 374 65.2
MELO3C011820.2 Cucumis melo HOM05D007027 ORTHO05D008765 1.5e-126 456.8 352 66.8
Nitab4.5_0004106g0030 Nicotiana tabacum HOM05D007027 ORTHO05D008765 1.5e-126 456.8 351 68.4
FAN11G0675 Fragaria x ananassa HOM05D007027 ORTHO05D008765 2.5e-126 456.1 380 63.9
Nn5g27423 Nelumbo nucifera HOM05D007027 ORTHO05D008765 2.5e-126 456.1 369 64.0
Gohir.A01G183800 Gossypium hirsutum HOM05D007027 ORTHO05D008765 3.2e-126 455.7 326 71.2
CANSAT54G3047 Cannabis sativa HOM05D007027 ORTHO05D008765 4.2e-126 455.3 318 70.4
DCAR_006671 Daucus carota HOM05D007027 ORTHO05D008765 9.5e-126 454.1 354 65.5
Glyma.12G167000 Glycine max HOM05D007027 ORTHO05D008765 2.8e-125 452.6 351 65.5
Thhalv10007981m.g Eutrema salsugineum HOM05D007027 ORTHO05D008765 3.6e-125 452.2 356 67.1
Ca_00043_v3 Cicer arietinum L. HOM05D007027 ORTHO05D008765 5.2e-124 448.4 331 68.6
Migut.B00775 Erythranthe guttata HOM05D007027 ORTHO05D008765 5.2e-124 448.4 314 72.6
Medtr2g005830 Medicago truncatula HOM05D007027 ORTHO05D008765 1.2e-123 447.2 341 67.2
Actinidia00176 Actinidia chinensis HOM05D007027 ORTHO05D008765 2.0e-123 446.4 346 67.1
Oeu064602.3 Olea europaea HOM05D007027 ORTHO05D008765 3.4e-123 445.7 362 65.5
SalBow7G1849 Salvia bowleyana HOM05D007027 ORTHO05D008765 4.4e-123 445.3 371 64.4
TPR.G2122 Trifolium pratense HOM05D007027 ORTHO05D008765 4.4e-123 445.3 364 63.7
Glyma.16G003100 Glycine max HOM05D007027 ORTHO05D008765 7.5e-123 444.5 333 67.3
Lalb_Chr20g0123691 Lupinus albus HOM05D007027 ORTHO05D008765 7.5e-123 444.5 360 65.0
Os12g0194800 Oryza sativa ssp. japonica HOM05D007027 ORTHO05D008765 1.7e-122 443.4 320 69.7
Aqoxy3G00475 Aquilegia oxysepala HOM05D007027 ORTHO05D008765 3.7e-122 442.2 355 65.1
Rhsim11G0122600 Rhododendron simsii HOM05D007027 ORTHO05D008765 4.9e-122 441.8 346 65.3
C08p49260 Brassica napus HOM05D007027 ORTHO05D008765 8.3e-122 441.0 319 69.3
Potri.003G008500 Populus trichocarpa HOM05D007027 ORTHO05D008765 8.3e-122 441.0 369 64.0
Atru.chr6.497 Acer truncatum HOM05D007027 ORTHO05D008765 1.1e-121 440.7 360 66.1
BcaC05g24848 Brassica carinata HOM05D007027 ORTHO05D008765 1.8e-121 439.9 356 65.4
BolC8t52461H Brassica oleracea HOM05D007027 ORTHO05D008765 1.8e-121 439.9 319 69.0
A09p65310 Brassica napus HOM05D007027 ORTHO05D008765 7.0e-121 438.0 318 69.2
AT1G09800 Arabidopsis thaliana HOM05D007027 ORTHO05D008765 1.6e-120 436.8 360 63.9
MBI03_g18680_MAGBIO Magnolia biondii HOM05D007027 ORTHO05D008765 2.0e-120 436.4 367 62.1
Psat1g222360 Pisum sativum HOM05D007027 ORTHO05D008765 2.7e-120 436.0 364 63.2
arahy.Tifrunner.gnm1.ann1.BAUB6M Arachis hypogaea HOM05D007027 ORTHO05D008765 3.5e-120 435.6 320 66.6
A06p06480 Brassica napus HOM05D007027 ORTHO05D008765 3.5e-120 435.6 339 66.4
Carub.0001s0916 Capsella rubella HOM05D007027 ORTHO05D008765 4.5e-120 435.3 361 64.3
Sp1g08410 Schrenkiella parvula HOM05D007027 ORTHO05D008765 5.9e-120 434.9 349 65.0
arahy.Tifrunner.gnm1.ann1.3G44QY Arachis hypogaea HOM05D007027 ORTHO05D008765 7.8e-120 434.5 320 66.6
unitig_699.g19848 Utricularia gibba HOM05D007027 ORTHO05D008765 1.0e-119 434.1 357 64.1
Ciclev10001491m.g Citrus clementina HOM05D007027 ORTHO05D008765 2.9e-119 432.6 325 68.3
Lj6g0019688 Lotus japonicus HOM05D007027 ORTHO05D008765 2.9e-119 432.6 349 63.9
Lj6g0023928 Lotus japonicus HOM05D007027 ORTHO05D008765 2.9e-119 432.6 349 63.9
CARHR009790 Cardamine hirsuta HOM05D007027 ORTHO05D008765 3.8e-119 432.2 361 62.3
Sabra03G0004200 Salix brachista HOM05D007027 ORTHO05D008765 3.8e-119 432.2 382 62.3
BolC5t29540H Brassica oleracea HOM05D007027 ORTHO05D008765 5.0e-119 431.8 337 66.5
EL10Ac6g14111 Beta vulgaris HOM05D007027 ORTHO05D008765 1.1e-118 430.6 355 64.8
VMungo0540G1081 Vigna mungo HOM05D007027 ORTHO05D008765 1.9e-118 429.9 363 61.4
Prupe.1G579000 Prunus persica HOM05D007027 ORTHO05D008765 2.5e-118 429.5 322 69.6
SGA_v2.0_scaffold304G47919 Striga asiatica HOM05D007027 ORTHO05D008765 9.5e-118 427.6 331 67.7
BraA06t23859Z Brassica rapa HOM05D007027 ORTHO05D008765 1.6e-117 426.8 339 65.2
C05p07890 Brassica napus HOM05D007027 ORTHO05D008765 2.8e-117 426.0 334 66.2
FAN21G1550 Fragaria x ananassa HOM05D007027 ORTHO05D008765 1.0e-116 424.1 346 65.3
Haze_10044 Corylus avellana HOM05D007027 ORTHO05D008765 6.8e-116 421.4 465 52.3
ATR1136G089 Amborella trichopoda HOM05D007027 ORTHO05D008765 8.9e-116 421.0 309 68.3
Zm00001eb138750 Zea mays HOM05D007027 ORTHO05D008765 1.2e-115 420.6 335 64.5
AL1G20380 Arabidopsis lyrata HOM05D007027 ORTHO05D008765 2.6e-115 419.5 393 58.5
Hund15459 Selenicereus undatus HOM05D007027 ORTHO05D008765 5.7e-115 418.3 358 61.7
Thecc.02G018500 Theobroma cacao HOM05D007027 ORTHO05D008765 2.2e-114 416.4 304 70.1
TWI23G0132 Tripterygium wilfordii HOM05D007027 ORTHO05D008765 3.7e-114 415.6 358 63.7
BcaC07g41859 Brassica carinata HOM05D007027 ORTHO05D008765 4.1e-113 412.1 323 66.3
PSO017G0894 Papaver somniferum HOM05D007027 ORTHO05D008765 3.9e-111 405.6 325 62.8
COL.COLO4_17723 Corchorus olitorius HOM05D007027 ORTHO05D008765 6.6e-111 404.8 322 65.2
PSO170G1275 Papaver somniferum HOM05D007027 ORTHO05D008765 7.3e-110 401.4 382 55.8
vmacro01711 Vaccinium macrocarpon HOM05D007027 ORTHO05D008765 1.3e-106 390.6 409 53.8
Pp3c1_13020 Physcomitrium patens HOM05D007027 ORTHO05D008765 7.0e-105 384.8 311 62.1
AUR62043952 Chenopodium quinoa HOM05D007027 ORTHO05D008765 2.5e-102 376.3 306 64.4
Eucgr.I02764 Eucalyptus grandis HOM05D007027 ORTHO05D008765 4.4e-99 365.5 296 64.5
Sed0027668 Sechium edule HOM05D007027 ORTHO05D008765 2.3e-95 353.2 289 63.3
Mapoly0016s0042 Marchantia polymorpha HOM05D007027 ORTHO05D008765 5.6e-94 348.6 315 56.8
ClCG11G013270 Citrullus lanatus HOM05D007027 ORTHO05D008765 8.4e-90 334.7 349 54.7
SMO118G0354 Selaginella moellendorffii HOM05D007027 ORTHO05D008765 1.7e-87 327.0 304 54.9
Phvul.006G218900 Phaseolus vulgaris HOM05D007027 ORTHO05D008765 8.6e-87 324.7 210 73.3
HPP92_013442 Vanilla planifolia HOM05D007027 ORTHO05D008765 1.6e-85 320.5 294 57.1
Sc07g0005100 Simmondsia chinensis HOM05D007027 ORTHO05D008765 1.4e-84 317.4 255 65.1
CBR_g30061 Chara braunii HOM05D007027 ORTHO05D008765 7.9e-72 275.0 454 38.8
HPP92_013441 Vanilla planifolia HOM05D007027 ORTHO05D008765 5.1e-71 272.3 178 71.9
Aa31LG1G5150 Aethionema arabicum HOM05D007027 ORTHO05D008765 8.7e-71 271.6 207 66.7
Lsat_1_v5_gn_9_120240 Lactuca sativa HOM05D007027 ORTHO05D008765 1.0e-63 248.1 172 73.3
CDE05G2927 Ceratophyllum demersum HOM05D007027 ORTHO05D008765 8.2e-61 238.4 134 83.6
AUR62028254 Chenopodium quinoa HOM05D007027 ORTHO05D008765 8.4e-58 228.4 179 64.8
MCO02G420 Micromonas commoda HOM05D007027 ORTHO05D008765 6.3e-53 212.2 407 36.1
Peaxi162Scf00011g01224 Petunia axillaris HOM05D007027 ORTHO05D008765 3.7e-45 186.4 224 50.4
Migut.B00774 Erythranthe guttata HOM05D007027 ORTHO05D008765 2.7e-40 170.2 96 85.4
RcHm_v2.0_Chr3g0481081 Rosa chinensis HOM05D007027 ORTHO05D008765 7.2e-33 145.6 79 84.8
CDE05G0566 Ceratophyllum demersum HOM05D007027 ORTHO05D008765 7.7e-27 125.6 136 49.3
Mapoly0209s0002 Marchantia polymorpha HOM05D006708 ORTHO05D008321 2.8e-21 107.1 307 27.4
SMO361G0559 Selaginella moellendorffii HOM05D006708 ORTHO05D008321 2.4e-20 104.0 316 29.4
Pp3c21_5420 Physcomitrium patens HOM05D006708 ORTHO05D008321 5.3e-20 102.8 315 27.0
AagrBONN_evm.TU.Sc2ySwM_228.1603 Anthoceros agrestis HOM05D006708 ORTHO05D008321 4.2e-17 93.2 308 26.0
FAN07G1828 Fragaria x ananassa HOM05D006708 ORTHO05D008321 1.8e-15 87.8 309 24.9
Nn3g21927 Nelumbo nucifera HOM05D006708 ORTHO05D008321 1.8e-15 87.8 307 26.4
Rhsim12G0000100 Rhododendron simsii HOM05D006708 ORTHO05D007921 6.8e-15 85.9 205 28.8
RcHm_v2.0_Chr4g0427681 Rosa chinensis HOM05D006708 ORTHO05D008321 6.8e-15 85.9 309 23.9
VMungo1215G1693 Vigna mungo HOM05D006708 ORTHO05D008321 6.8e-15 85.9 339 25.4
FAN17G2628 Fragaria x ananassa HOM05D006708 ORTHO05D008321 8.8e-15 85.5 309 24.3
Hma1.2p1_0013F.1_g007850 Hydrangea macrophylla HOM05D006708 ORTHO05D008321 8.8e-15 85.5 200 29.5
Potri.008G206200 Populus trichocarpa HOM05D006708 ORTHO05D008321 8.8e-15 85.5 309 25.9
SalBow2G2621 Salvia bowleyana HOM05D006708 ORTHO05D008321 8.8e-15 85.5 219 30.1
HanXRQChr10g0293331 Helianthus annuus HOM05D006708 ORTHO05D008321 1.2e-14 85.1 307 24.8
FvH4_4g21570 Fragaria vesca HOM05D006708 ORTHO05D008321 2.0e-14 84.3 309 24.3
arahy.Tifrunner.gnm1.ann1.H7T0W5 Arachis hypogaea HOM05D006708 ORTHO05D008321 2.6e-14 84.0 318 25.8
arahy.Tifrunner.gnm1.ann1.YU479Z Arachis hypogaea HOM05D006708 ORTHO05D008321 2.6e-14 84.0 307 25.1
Lj4g0015836 Lotus japonicus HOM05D006708 ORTHO05D008321 2.6e-14 84.0 318 24.2
TPR.G12542 Trifolium pratense HOM05D006708 ORTHO05D008321 3.4e-14 83.6 311 24.8
CANSAT64G0974 Cannabis sativa HOM05D006708 ORTHO05D008321 5.7e-14 82.8 198 26.8
Ca_21374_v3 Cicer arietinum L. HOM05D006708 ORTHO05D008321 7.5e-14 82.4 307 24.1
Cre09.g405150 Chlamydomonas reinhardtii HOM05D006708 ORTHO05D008321 1.3e-13 81.6 318 26.4
FAN12G1816 Fragaria x ananassa HOM05D006708 ORTHO05D008321 1.3e-13 81.6 309 23.9
Atru.chr4.3165 Acer truncatum HOM05D006708 ORTHO05D008321 1.7e-13 81.3 307 25.4
Glyma.17G041000 Glycine max HOM05D006708 ORTHO05D008321 1.7e-13 81.3 309 25.2
CBR_g55386 Chara braunii HOM05D006708 ORTHO05D008321 1.4e-12 78.2 307 27.4
MCO13G233 Micromonas commoda HOM05D006708 ORTHO05D008321 2.4e-12 77.4 311 27.0
Medtr4g123970 Medicago truncatula HOM05D006708 ORTHO05D008321 3.1e-12 77.0 307 23.5
Lalb_Chr18g0047341 Lupinus albus HOM05D006708 ORTHO05D008321 4.1e-12 76.6 320 23.8
Hund22645 Selenicereus undatus HOM05D006708 ORTHO05D008321 5.4e-12 76.3 309 24.6
HPP92_001944 Vanilla planifolia HOM05D006708 ORTHO05D008321 5.4e-12 76.3 182 28.6
Migut.A01089 Erythranthe guttata HOM05D006708 ORTHO05D008321 9.1e-12 75.5 346 24.0
Psat4g021160 Pisum sativum HOM05D006708 ORTHO05D008321 2.0e-11 74.3 202 25.2
SEGI_30443 Sequoiadendron giganteum HOM05D007027 ORTHO05D008765 1.3e-10 71.6 51 66.7
Glyma.13G119200 Glycine max HOM05D006708 ORTHO05D008321 1.7e-10 71.2 174 28.2
TWI53G0094 Tripterygium wilfordii HOM05D006708 ORTHO05D008321 1.9e-09 67.8 199 27.6
MELO3C021228.2 Cucumis melo HOM05D006708 ORTHO05D008321 1.4e-07 61.6 204 24.5
unitig_1.g29359 Utricularia gibba HOM05D006708 ORTHO05D008321 1.4e-07 61.6 224 25.9
SEGI_32206 Sequoiadendron giganteum HOM05D006708 ORTHO05D008321 4.0e-07 60.1 96 30.2
PRCOL_00002295 Prasinoderma coloniale HOM05D006708 ORTHO05D008321 5.2e-07 59.7 150 28.7
unitig_747.g22054 Utricularia gibba HOM05D006708 ORTHO05D008321 4.4e-06 56.6 234 25.6


User provided reference genes

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