Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G2638 Erigeron canadensis HOM05D005584 ORTHO05D006809 3.4e-124 448.4 226 100.0
Lsat_1_v5_gn_9_120260 Lactuca sativa HOM05D005584 ORTHO05D006809 7.6e-92 340.9 233 76.0
HanXRQChr12g0371541 Helianthus annuus HOM05D005584 ORTHO05D006809 1.1e-82 310.5 214 73.8
Hma1.2p1_0587F.1_g184080 Hydrangea macrophylla HOM05D005584 ORTHO05D006809 1.7e-75 286.6 230 65.7
Manes.12G026800 Manihot esculenta HOM05D005584 ORTHO05D006809 1.9e-74 283.1 232 65.9
vmacro01156 Vaccinium macrocarpon HOM05D005584 ORTHO05D006809 1.9e-74 283.1 226 64.2
Dinv15274 Davidia involucrata HOM05D001482 ORTHO05D001499 2.4e-74 282.7 230 64.3
Actinidia08155 Actinidia chinensis HOM05D005584 ORTHO05D006809 2.1e-73 279.6 231 64.5
TAR374G1289 Trochodendron aralioides HOM05D005584 ORTHO05D006809 3.0e-72 275.8 231 64.5
CSS0030415 Camellia sinensis var. sinensis HOM05D005584 ORTHO05D006809 6.6e-72 274.6 226 63.7
Lsat_1_v5_gn_8_155560 Lactuca sativa HOM05D005584 ORTHO05D006809 2.5e-71 272.7 205 69.8
arahy.Tifrunner.gnm1.ann1.0L0HR0 Arachis hypogaea HOM05D005584 ORTHO05D006809 7.3e-71 271.2 230 62.6
arahy.Tifrunner.gnm1.ann1.5FW2L6 Arachis hypogaea HOM05D005584 ORTHO05D006809 7.3e-71 271.2 230 62.6
CiPaw.05G185800 Carya illinoinensis HOM05D005584 ORTHO05D006809 1.3e-70 270.4 227 63.0
Atru.chr11.2060 Acer truncatum HOM05D005584 ORTHO05D006809 1.6e-70 270.0 228 63.6
MSTRG.2403 Avicennia marina HOM05D005584 ORTHO05D006809 4.8e-70 268.5 230 60.9
QL03p059496 Quercus lobata HOM05D005584 ORTHO05D006809 8.1e-70 267.7 231 62.8
GSVIVG01013774001 Vitis vinifera HOM05D005584 ORTHO05D006809 8.1e-70 267.7 231 61.9
Ca_28318_v3 Cicer arietinum L. HOM05D005584 ORTHO05D006809 1.1e-69 267.3 230 63.9
Ciclev10032655m.g Citrus clementina HOM05D005584 ORTHO05D006809 1.1e-69 267.3 231 63.2
Potri.009G167600 Populus trichocarpa HOM05D005584 ORTHO05D006809 3.1e-69 265.8 236 61.4
Lj1g0002439 Lotus japonicus HOM05D005584 ORTHO05D006809 1.5e-68 263.5 230 62.2
Solyc08g067820.3 Solanum lycopersicum HOM05D005584 ORTHO05D006809 2.0e-68 263.1 232 61.2
TWI18G1102 Tripterygium wilfordii HOM05D005584 ORTHO05D006809 2.6e-68 262.7 231 61.5
COL.COLO4_24203 Corchorus olitorius HOM05D005584 ORTHO05D006809 3.4e-68 262.3 229 60.3
Thecc.02G253500 Theobroma cacao HOM05D005584 ORTHO05D006809 5.8e-68 261.5 233 60.1
Prupe.4G221000 Prunus persica HOM05D005584 ORTHO05D006809 7.6e-68 261.2 231 59.7
Sabra09G0130200 Salix brachista HOM05D005584 ORTHO05D006809 1.3e-67 260.4 236 60.6
Gohir.A01G162200 Gossypium hirsutum HOM05D005584 ORTHO05D006809 2.2e-67 259.6 229 60.7
Lalb_Chr12g0210051 Lupinus albus HOM05D005584 ORTHO05D006809 2.2e-67 259.6 230 62.2
Oeu056410.1 Olea europaea HOM05D005584 ORTHO05D006809 2.2e-67 259.6 226 60.6
CSS0021029 Camellia sinensis var. sinensis HOM05D005584 ORTHO05D006809 2.9e-67 259.2 226 61.9
Migut.E00177 Erythranthe guttata HOM05D005584 ORTHO05D006809 2.9e-67 259.2 231 60.2
Nn2g14080 Nelumbo nucifera HOM05D005584 ORTHO05D006809 2.9e-67 259.2 233 60.5
Sopen08g021760 Solanum pennellii HOM05D005584 ORTHO05D006809 2.9e-67 259.2 232 60.8
Lj3g0022996 Lotus japonicus HOM05D005584 ORTHO05D006809 3.8e-67 258.8 230 61.3
PGSC0003DMG400033619 Solanum tuberosum HOM05D005584 ORTHO05D006809 4.9e-67 258.5 232 60.3
Nn4g22723 Nelumbo nucifera HOM05D005584 ORTHO05D006809 6.4e-67 258.1 233 60.5
Duzib251G0376 Durio zibethinus HOM05D005584 ORTHO05D006809 1.9e-66 256.5 231 60.6
Psat2g045680 Pisum sativum HOM05D005584 ORTHO05D006809 1.9e-66 256.5 234 61.1
Cc08_g15830 Coffea canephora HOM05D005584 ORTHO05D006809 5.5e-66 255.0 231 58.9
MBI10_g28000_MAGBIO Magnolia biondii HOM05D005584 ORTHO05D006809 7.1e-66 254.6 227 59.9
PGR142G0158 Punica granatum HOM05D005584 ORTHO05D006809 7.1e-66 254.6 232 61.6
Medtr5g077780 Medicago truncatula HOM05D005584 ORTHO05D006809 9.3e-66 254.2 227 61.2
AUR62014068 Chenopodium quinoa HOM05D005584 ORTHO05D006809 1.6e-65 253.4 232 59.1
Gohir.D08G021700 Gossypium hirsutum HOM05D005584 ORTHO05D006809 1.6e-65 253.4 229 59.8
MD11G1211500 Malus domestica HOM05D005584 ORTHO05D006809 1.6e-65 253.4 231 58.4
Cfa009174 Carpinus fangiana HOM05D005584 ORTHO05D006809 2.1e-65 253.1 202 63.4
FAN16G0047 Fragaria x ananassa HOM05D005584 ORTHO05D006809 2.1e-65 253.1 231 59.7
Haze_12208 Corylus avellana HOM05D005584 ORTHO05D006809 2.7e-65 252.7 226 60.2
FvH4_3g23340 Fragaria vesca HOM05D005584 ORTHO05D006809 3.5e-65 252.3 231 60.2
Gohir.D05G347832 Gossypium hirsutum HOM05D005584 ORTHO05D006809 4.6e-65 251.9 229 59.4
Cpa.g.sc69.68 Carica papaya HOM05D005584 ORTHO05D006809 1.0e-64 250.8 231 58.4
Peaxi162Scf00105g01417 Petunia axillaris HOM05D005584 ORTHO05D006809 1.0e-64 250.8 223 61.4
Eucgr.K03598 Eucalyptus grandis HOM05D005584 ORTHO05D006809 2.3e-64 249.6 229 61.1
Gohir.D01G149500 Gossypium hirsutum HOM05D005584 ORTHO05D006809 3.0e-64 249.2 231 58.4
RcHm_v2.0_Chr5g0041131 Rosa chinensis HOM05D005584 ORTHO05D006809 3.0e-64 249.2 231 60.2
FAN25G2737 Fragaria x ananassa HOM05D005584 ORTHO05D006809 3.9e-64 248.8 231 58.9
Phvul.011G052800 Phaseolus vulgaris HOM05D005584 ORTHO05D006809 5.1e-64 248.4 227 58.6
FAN21G3548 Fragaria x ananassa HOM05D005584 ORTHO05D006809 6.7e-64 248.1 232 59.1
PSO017G5970 Papaver somniferum HOM05D005584 ORTHO05D006809 6.7e-64 248.1 233 57.9
Rhsim12G0043700 Rhododendron simsii HOM05D005584 ORTHO05D006809 1.1e-63 247.3 234 57.7
CANSAT56G2850 Cannabis sativa HOM05D005584 ORTHO05D006809 3.3e-63 245.7 231 59.7
Hund25366 Selenicereus undatus HOM05D005584 ORTHO05D003410 7.4e-63 244.6 273 52.7
Aqoxy3G01083 Aquilegia oxysepala HOM05D005584 ORTHO05D006809 6.2e-62 241.5 232 57.3
PSO478G2901 Papaver somniferum HOM05D005584 ORTHO05D006809 6.2e-62 241.5 233 57.1
unitig_62.g23668 Utricularia gibba HOM05D005584 ORTHO05D006809 1.8e-61 240.0 227 56.4
AL4G22490 Arabidopsis lyrata HOM05D005584 ORTHO05D006809 5.3e-61 238.4 236 56.8
Thhalv10017205m.g Eutrema salsugineum HOM05D005584 ORTHO05D006809 2.0e-60 236.5 240 55.4
SalBow8G4058 Salvia bowleyana HOM05D005584 ORTHO05D006809 2.6e-60 236.1 218 58.7
Sed0009924 Sechium edule HOM05D005584 ORTHO05D006809 3.4e-60 235.7 227 56.4
VMungo1127G1231 Vigna mungo HOM05D005584 ORTHO05D006809 3.4e-60 235.7 202 59.9
CsaV3_2G024710 Cucumis sativus L. HOM05D005584 ORTHO05D006809 1.0e-59 234.2 229 58.5
FAN11G0752 Fragaria x ananassa HOM05D005584 ORTHO05D006809 2.2e-59 233.0 205 60.5
BraA07t29554Z Brassica rapa HOM05D005584 ORTHO05D006809 8.4e-59 231.1 237 54.9
Carub.0004s0855 Capsella rubella HOM05D005584 ORTHO05D006809 1.1e-58 230.7 233 54.9
SGA_v2.0_scaffold57G20112 Striga asiatica HOM05D005584 ORTHO05D006809 1.9e-58 229.9 201 60.7
A07p18380 Brassica napus HOM05D005584 ORTHO05D006809 3.2e-58 229.2 237 54.4
BcaC02g10906 Brassica carinata HOM05D005584 ORTHO05D006809 7.1e-58 228.0 237 54.9
C04p23810 Brassica napus HOM05D005584 ORTHO05D006809 2.1e-57 226.5 237 54.4
Sp4g10620 Schrenkiella parvula HOM05D005584 ORTHO05D006809 2.1e-57 226.5 237 54.9
BolC4t23879H Brassica oleracea HOM05D005584 ORTHO05D006809 4.6e-57 225.3 237 54.4
Aa31LG5G8210 Aethionema arabicum HOM05D005584 ORTHO05D006809 3.9e-56 222.2 264 48.9
HPP92_004538 Vanilla planifolia HOM05D005584 ORTHO05D006809 3.9e-56 222.2 214 57.9
Nitab4.5_0006579g0040 Nicotiana tabacum HOM05D005584 ORTHO05D006809 2.5e-55 219.5 167 64.7
CARHR120490 Cardamine hirsuta HOM05D005584 ORTHO05D006809 3.3e-55 219.2 236 51.7
Lj6A807T86 Lonicera japonica HOM05D005584 ORTHO05D006809 9.6e-55 217.6 232 55.2
Glyma.12G050500 Glycine max HOM05D005584 ORTHO05D006809 3.7e-54 215.7 184 62.5
BcaB02g10116 Brassica carinata HOM05D005584 ORTHO05D006809 6.3e-54 214.9 208 55.3
Nitab4.5_0000125g0200 Nicotiana tabacum HOM05D005584 ORTHO05D006809 8.2e-54 214.5 161 67.1
ClCG08G017930 Citrullus lanatus HOM05D005584 ORTHO05D006809 1.7e-51 206.8 210 57.6
SGA_v2.0_scaffold74G24685 Striga asiatica HOM05D005584 ORTHO05D006809 8.4e-51 204.5 198 56.1
Zm00001eb209860 Zea mays HOM05D005584 ORTHO05D006809 5.5e-50 201.8 261 46.4
Hma1.2p1_0223F.1_g094390 Hydrangea macrophylla HOM05D005584 ORTHO05D006809 2.7e-49 199.5 178 62.4
ATR1091G072 Amborella trichopoda HOM05D005584 ORTHO05D006809 3.5e-49 199.1 216 55.1
EL10Ac6g13701 Beta vulgaris HOM05D005584 ORTHO05D006809 1.0e-48 197.6 232 50.4
Gorai.009G374800 Gossypium raimondii HOM05D005584 ORTHO05D006809 1.0e-48 197.6 229 51.5
AT5G27300 Arabidopsis thaliana HOM05D005584 ORTHO05D006809 1.3e-48 197.2 222 51.4
TPR.G23699 Trifolium pratense HOM05D005584 ORTHO05D006809 9.7e-47 191.0 226 52.2
AUR62005408 Chenopodium quinoa HOM05D005584 ORTHO05D006809 6.3e-46 188.3 229 50.2
Dinv24830 Davidia involucrata HOM05D005584 ORTHO05D006809 8.2e-46 188.0 178 60.7
TPR.G25316 Trifolium pratense HOM05D005584 ORTHO05D006809 1.2e-44 184.1 122 70.5
SEGI_24248 Sequoiadendron giganteum HOM05D005584 ORTHO05D006809 5.9e-44 181.8 255 45.1
CDE06G1284 Ceratophyllum demersum HOM05D005584 ORTHO05D006809 3.8e-43 179.1 228 46.1
Mapoly0029s0094 Marchantia polymorpha HOM05D005584 ORTHO05D006809 1.2e-41 174.1 221 48.0
BcaB06g28170 Brassica carinata HOM05D005584 ORTHO05D006809 1.4e-40 170.6 129 61.2
Gorai.002G185600 Gossypium raimondii HOM05D005584 ORTHO05D006809 1.4e-40 170.6 228 46.5
Eucgr.D00612 Eucalyptus grandis HOM05D005584 ORTHO05D006809 1.8e-40 170.2 155 58.1
Potri.006G221301 Populus trichocarpa HOM05D005584 ORTHO05D006809 3.9e-40 169.1 204 50.0
DCAR_026533 Daucus carota HOM05D005584 ORTHO05D006809 1.1e-39 167.5 172 52.9
Sc11g0001080 Simmondsia chinensis HOM05D005584 ORTHO05D006809 5.3e-37 158.7 175 53.7
CANSAT64G2516 Cannabis sativa HOM05D002890 ORTHO05D005855 2.6e-36 156.4 96 72.9
Pp3c16_13430 Physcomitrium patens HOM05D005584 ORTHO05D006809 1.9e-34 150.2 252 41.7
AT2G27790 Arabidopsis thaliana HOM05D005584 ORTHO05D006809 1.6e-33 147.1 197 46.7
Ah.02g130030 Amaranthus hybridus HOM05D005584 ORTHO05D006809 2.7e-33 146.4 197 46.2
MELO3C010671.2 Cucumis melo HOM05D005584 ORTHO05D006809 1.4e-32 144.1 229 42.4
Gorai.001G098200 Gossypium raimondii HOM05D005584 ORTHO05D006809 5.1e-32 142.1 220 40.5
CAN.G21.11 Capsicum annuum HOM05D005584 ORTHO05D006809 1.1e-29 134.4 77 81.8
Hund18879 Selenicereus undatus HOM05D005584 ORTHO05D006809 6.7e-24 115.2 169 45.0
SHI17678 Sapria himalayana HOM05D005584 ORTHO05D006809 7.5e-23 111.7 70 74.3
QL01p007518 Quercus lobata HOM05D005584 ORTHO05D006809 1.4e-21 107.5 176 40.3
SMO361G0752 Selaginella moellendorffii HOM05D005584 ORTHO05D006809 1.2e-20 104.4 67 62.7
COL.COLO4_24201 Corchorus olitorius HOM05D005584 ORTHO05D006809 2.7e-17 93.2 57 68.4
CBR_g19306 Chara braunii HOM05D005584 ORTHO05D006809 8.0e-17 91.7 100 47.0
Ca_05838_v3 Cicer arietinum L. HOM05D005584 ORTHO05D006809 1.5e-15 87.4 49 75.5
BcaB05g23234 Brassica carinata HOM05D005584 ORTHO05D006809 2.2e-14 83.6 52 73.1
Os02g0105000 Oryza sativa ssp. japonica HOM05D005584 ORTHO05D006809 2.2e-14 83.6 70 64.3
CAN.G414.8 Capsicum annuum HOM05D000928 ORTHO05D001186 6.3e-14 82.0 49 71.4
ECA233G5965 Erigeron canadensis HOM05D005584 ORTHO05D006809 5.4e-13 79.0 56 78.6
MBI12_g21981_MAGBIO Magnolia biondii HOM05D001465 ORTHO05D001434 5.4e-13 79.0 48 79.2
MBI02_g20871_MAGBIO Magnolia biondii HOM05D005584 ORTHO05D006809 1.2e-12 77.8 60 68.3
MBI02_g44783_MAGBIO Magnolia biondii HOM05D005584 ORTHO05D006809 2.0e-12 77.0 48 77.1
MBI02_g25373_MAGBIO Magnolia biondii HOM05D005584 ORTHO05D006809 5.9e-12 75.5 48 75.0
MBI14_g03623_MAGBIO Magnolia biondii HOM05D000013 ORTHO05D006809 1.7e-11 73.9 86 51.2
MBI19_g26621_MAGBIO Magnolia biondii HOM05D005584 ORTHO05D006809 4.2e-10 69.3 43 74.4
MBI14_g10639_MAGBIO Magnolia biondii HOM05D005584 ORTHO05D006809 9.4e-10 68.2 43 74.4
Gorai.004G016800 Gossypium raimondii HOM05D005584 ORTHO05D006809 3.4e-07 59.7 52 63.5
Glyma.11G125900 Glycine max HOM05D005584 ORTHO05D006809 4.4e-07 59.3 29 89.7
MBI03_g02127_MAGBIO Magnolia biondii HOM05D002786 ORTHO05D006809 1.3e-06 57.8 42 61.9


User provided reference genes

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