Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA233G1948 Erigeron canadensis HOM05D006124 ORTHO05D007854 1.8e-243 845.5 425 100.0
HanXRQChr02g0055911 Helianthus annuus HOM05D006124 ORTHO05D007854 3.5e-215 751.5 390 92.8
Lsat_1_v5_gn_6_46340 Lactuca sativa HOM05D006124 ORTHO05D007854 2.6e-210 735.3 418 87.8
Hma1.2p1_0002F.1_g001970 Hydrangea macrophylla HOM05D006124 ORTHO05D007854 2.8e-196 688.7 390 83.1
CSS0017090 Camellia sinensis var. sinensis HOM05D006124 ORTHO05D007854 4.0e-195 684.9 420 80.2
Cc01_g01430 Coffea canephora HOM05D006124 ORTHO05D007854 1.5e-194 682.9 387 83.5
Dinv30520 Davidia involucrata HOM05D006124 ORTHO05D007854 3.4e-194 681.8 418 80.9
Rhsim08G0043400 Rhododendron simsii HOM05D006124 ORTHO05D007854 5.8e-194 681.0 391 83.1
vmacro03179 Vaccinium macrocarpon HOM05D006124 ORTHO05D007854 1.7e-193 679.5 391 82.6
Actinidia07118 Actinidia chinensis HOM05D006124 ORTHO05D007854 6.6e-190 667.5 391 80.6
MSTRG.21138 Avicennia marina HOM05D006124 ORTHO05D007854 7.3e-189 664.1 386 80.8
Nitab4.5_0000214g0090 Nicotiana tabacum HOM05D006124 ORTHO05D007854 1.2e-188 663.3 388 81.4
Eucgr.J00945 Eucalyptus grandis HOM05D006124 ORTHO05D007854 1.6e-188 662.9 416 78.1
QL01p023235 Quercus lobata HOM05D006124 ORTHO05D007854 1.6e-188 662.9 418 76.3
GSVIVG01025154001 Vitis vinifera HOM05D006124 ORTHO05D007854 4.7e-188 661.4 388 80.2
Cfa012640 Carpinus fangiana HOM05D006124 ORTHO05D007854 8.1e-188 660.6 389 81.0
Peaxi162Scf00876g00022 Petunia axillaris HOM05D006124 ORTHO05D007854 1.8e-187 659.4 388 81.2
Thecc.09G259100 Theobroma cacao HOM05D006124 ORTHO05D007854 3.1e-187 658.7 389 81.2
Haze_08019 Corylus avellana HOM05D006124 ORTHO05D007854 5.2e-187 657.9 396 79.5
Cpa.g.sc139.77 Carica papaya HOM05D006124 ORTHO05D007854 1.2e-186 656.8 412 78.2
Duzib150G0641 Durio zibethinus HOM05D006124 ORTHO05D007854 2.0e-186 656.0 389 81.0
Peaxi162Scf00272g00827 Petunia axillaris HOM05D006124 ORTHO05D007854 2.6e-186 655.6 388 80.4
Aqoxy5G00340 Aquilegia oxysepala HOM05D006124 ORTHO05D007854 3.4e-186 655.2 392 80.1
MBI18_g17017_MAGBIO Magnolia biondii HOM05D006124 ORTHO05D007854 3.4e-186 655.2 393 80.7
COL.COLO4_05187 Corchorus olitorius HOM05D006124 ORTHO05D007854 4.4e-186 654.8 386 81.1
Migut.D02195 Erythranthe guttata HOM05D006124 ORTHO05D007854 4.4e-186 654.8 384 80.5
CAN.G219.5 Capsicum annuum HOM05D006124 ORTHO05D007854 7.6e-186 654.1 388 80.2
Manes.04G024500 Manihot esculenta HOM05D006124 ORTHO05D007854 9.9e-186 653.7 409 77.0
Solyc04g054700.3 Solanum lycopersicum HOM05D006124 ORTHO05D007854 1.3e-185 653.3 390 79.5
THA.LOC104801004 Tarenaya hassleriana HOM05D006124 ORTHO05D007854 1.3e-185 653.3 385 80.3
Sabra04G0071700 Salix brachista HOM05D006124 ORTHO05D007854 3.8e-185 651.7 392 79.8
Nitab4.5_0004386g0010 Nicotiana tabacum HOM05D006124 ORTHO05D007854 6.4e-185 651.0 389 80.2
Prupe.6G097100 Prunus persica HOM05D006124 ORTHO05D007854 1.1e-184 650.2 390 80.0
Nn7g36111 Nelumbo nucifera HOM05D006124 ORTHO05D007854 2.4e-184 649.0 388 80.2
Ca_08379_v3 Cicer arietinum L. HOM05D006124 ORTHO05D007854 4.2e-184 648.3 392 78.1
Potri.004G113700 Populus trichocarpa HOM05D006124 ORTHO05D007854 4.2e-184 648.3 392 79.8
EL10Ac5g12347 Beta vulgaris HOM05D006124 ORTHO05D007854 5.4e-184 647.9 390 78.7
PSO384G4530 Papaver somniferum HOM05D006124 ORTHO05D007854 7.1e-184 647.5 391 79.0
MD03G1112800 Malus domestica HOM05D006124 ORTHO05D007854 9.3e-184 647.1 390 79.7
PSO541G0641 Papaver somniferum HOM05D006124 ORTHO05D007854 9.3e-184 647.1 391 78.8
Atru.chr3.3681 Acer truncatum HOM05D006124 ORTHO05D007854 2.1e-183 646.0 390 79.7
TPR.G16093 Trifolium pratense HOM05D006124 ORTHO05D007854 2.7e-183 645.6 393 77.4
Ciclev10005033m.g Citrus clementina HOM05D006124 ORTHO05D007854 7.8e-183 644.0 387 79.6
PSO339G3674 Papaver somniferum HOM05D006124 ORTHO05D007854 7.8e-183 644.0 391 78.5
Gohir.A09G106200 Gossypium hirsutum HOM05D006124 ORTHO05D007854 1.0e-182 643.7 388 79.1
Gorai.006G120700 Gossypium raimondii HOM05D006124 ORTHO05D007854 1.0e-182 643.7 388 79.1
Gohir.D09G102900 Gossypium hirsutum HOM05D006124 ORTHO05D007854 3.9e-182 641.7 388 78.9
Ciclev10011800m.g Citrus clementina HOM05D006124 ORTHO05D007854 5.1e-182 641.3 389 78.7
FAN25G1144 Fragaria x ananassa HOM05D006124 ORTHO05D007854 8.7e-182 640.6 390 78.7
RcHm_v2.0_Chr5g0060301 Rosa chinensis HOM05D006124 ORTHO05D007854 1.5e-181 639.8 390 78.7
CANSAT54G1697 Cannabis sativa HOM05D006124 ORTHO05D007854 1.9e-181 639.4 418 76.3
FvH4_3g32970 Fragaria vesca HOM05D006124 ORTHO05D007854 2.5e-181 639.0 390 78.5
SGA_v2.0_scaffold61G21160 Striga asiatica HOM05D006124 ORTHO05D007854 4.3e-181 638.3 407 74.9
FAN11G0357 Fragaria x ananassa HOM05D006124 ORTHO05D007854 5.6e-181 637.9 390 78.2
TWI39G0794 Tripterygium wilfordii HOM05D006124 ORTHO05D007854 5.6e-181 637.9 392 78.6
AL1G14800 Arabidopsis lyrata HOM05D006124 ORTHO05D007854 7.3e-181 637.5 386 77.7
ClCG01G004970 Citrullus lanatus HOM05D006124 ORTHO05D007854 7.3e-181 637.5 388 77.8
FAN21G3497 Fragaria x ananassa HOM05D006124 ORTHO05D007854 7.3e-181 637.5 390 78.5
AT1G05055 Arabidopsis thaliana HOM05D006124 ORTHO05D007854 1.3e-180 636.7 386 77.7
Sp1g03920 Schrenkiella parvula HOM05D006124 ORTHO05D007854 1.3e-180 636.7 399 77.4
BcaB03g13459 Brassica carinata HOM05D006124 ORTHO05D007854 2.1e-180 636.0 418 74.2
A08p36590 Brassica napus HOM05D006124 ORTHO05D007854 2.8e-180 635.6 387 77.8
C08p01730 Brassica napus HOM05D006124 ORTHO05D007854 2.8e-180 635.6 385 78.2
BolC8t46973H Brassica oleracea HOM05D006124 ORTHO05D007854 2.8e-180 635.6 385 78.2
BraA08t35561Z Brassica rapa HOM05D006124 ORTHO05D007854 2.8e-180 635.6 387 77.8
Medtr7g089440 Medicago truncatula HOM05D006124 ORTHO05D007854 3.6e-180 635.2 397 75.8
Aa31LG1G19730 Aethionema arabicum HOM05D006124 ORTHO05D007854 6.2e-180 634.4 390 77.4
CsaV3_5G005370 Cucumis sativus L. HOM05D006124 ORTHO05D007854 6.2e-180 634.4 390 77.2
CARHR004500 Cardamine hirsuta HOM05D006124 ORTHO05D007854 1.1e-179 633.6 386 77.7
MELO3C005421.2 Cucumis melo HOM05D006124 ORTHO05D007854 1.8e-179 632.9 390 77.2
arahy.Tifrunner.gnm1.ann1.63AZS3 Arachis hypogaea HOM05D006124 ORTHO05D007854 2.6e-178 629.0 390 76.2
Thhalv10007730m.g Eutrema salsugineum HOM05D006124 ORTHO05D007854 2.6e-178 629.0 395 75.9
Lj1g0025688 Lotus japonicus HOM05D006124 ORTHO05D007854 2.6e-178 629.0 392 75.3
Glyma.11G073900 Glycine max HOM05D006124 ORTHO05D007854 3.4e-178 628.6 385 75.3
arahy.Tifrunner.gnm1.ann1.M1WJK6 Arachis hypogaea HOM05D006124 ORTHO05D007854 7.6e-178 627.5 390 76.2
Glyma.19G129000 Glycine max HOM05D006124 ORTHO05D007854 7.6e-178 627.5 386 75.6
VMungo1383G3228 Vigna mungo HOM05D006124 ORTHO05D007854 7.6e-178 627.5 386 75.4
Lalb_Chr22g0357551 Lupinus albus HOM05D006124 ORTHO05D007854 9.9e-178 627.1 389 75.6
Sed0018571 Sechium edule HOM05D006124 ORTHO05D007854 1.3e-177 626.7 386 77.2
Carub.0001s0430 Capsella rubella HOM05D006124 ORTHO05D007854 1.9e-176 622.9 386 75.9
CiPaw.05G171100 Carya illinoinensis HOM05D006124 ORTHO05D007854 2.4e-176 622.5 416 75.7
Lalb_Chr14g0365721 Lupinus albus HOM05D006124 ORTHO05D007854 2.4e-176 622.5 387 75.2
unitig_21.g20322 Utricularia gibba HOM05D006124 ORTHO05D007854 4.2e-176 621.7 406 73.9
DCAR_015555 Daucus carota HOM05D006124 ORTHO05D007854 5.1e-174 614.8 365 81.1
Os04g0508900 Oryza sativa ssp. japonica HOM05D006124 ORTHO05D007854 8.1e-172 607.4 390 74.6
Zm00001eb077790 Zea mays HOM05D006124 ORTHO05D007854 2.4e-171 605.9 430 71.9
SalBow3G1513 Salvia bowleyana HOM05D006124 ORTHO05D007854 4.2e-168 595.1 351 82.1
CiPaw.13G108300 Carya illinoinensis HOM05D006124 ORTHO05D007854 1.8e-166 589.7 379 78.1
SEGI_32950 Sequoiadendron giganteum HOM05D006124 ORTHO05D007854 8.7e-166 587.4 396 70.2
Oeu035057.1 Olea europaea HOM05D006124 ORTHO05D007854 3.3e-165 585.5 353 80.7
PGR119G0371 Punica granatum HOM05D006124 ORTHO05D007854 4.0e-163 578.6 377 77.2
AUR62021039 Chenopodium quinoa HOM05D006124 ORTHO05D007854 2.0e-162 576.2 361 77.3
AUR62018404 Chenopodium quinoa HOM05D006124 ORTHO05D007854 2.2e-161 572.8 362 76.5
CDE04G2680 Ceratophyllum demersum HOM05D006124 ORTHO05D007854 1.0e-153 547.4 338 78.4
Sopen04g024450 Solanum pennellii HOM05D006124 ORTHO05D007854 2.2e-153 546.2 312 81.1
Ah.13g077240 Amaranthus hybridus HOM05D006124 ORTHO05D007854 1.4e-150 537.0 313 79.9
Mapoly0005s0033 Marchantia polymorpha HOM05D006124 ORTHO05D007854 6.7e-150 534.6 391 65.2
Sc06g0010480 Simmondsia chinensis HOM05D006124 ORTHO05D007854 1.3e-148 530.4 313 78.0
TAR369G0666 Trochodendron aralioides HOM05D006124 ORTHO05D007854 1.3e-148 530.4 323 78.0
Pp3c24_6530 Physcomitrium patens HOM05D006124 ORTHO05D007854 2.4e-147 526.2 395 63.0
Peaxi162Scf00106g02220 Petunia axillaris HOM05D006124 ORTHO05D007854 1.2e-146 523.9 388 68.8
SMO141G0040 Selaginella moellendorffii HOM05D006124 ORTHO05D007854 2.3e-142 509.6 388 61.1
MD11G1132000 Malus domestica HOM05D006124 ORTHO05D007854 2.8e-140 502.7 333 71.5
Lj1C682G4 Lonicera japonica HOM05D006124 ORTHO05D007854 4.8e-140 501.9 276 86.2
ATR0580G285 Amborella trichopoda HOM05D006124 ORTHO05D007854 2.4e-139 499.6 313 74.8
Phvul.001G121400 Phaseolus vulgaris HOM05D006124 ORTHO05D007854 3.1e-139 499.2 305 75.7
CBR_g21234 Chara braunii HOM05D006124 ORTHO05D007854 9.1e-139 497.7 392 60.5
Peaxi162Scf00876g00023 Petunia axillaris HOM05D006124 ORTHO05D007854 8.8e-134 481.1 291 79.4
Psat3g079640 Pisum sativum HOM05D006124 ORTHO05D007854 7.2e-120 434.9 269 75.5
Cre03.g179550 Chlamydomonas reinhardtii HOM05D006124 ORTHO05D007854 7.2e-112 408.3 408 51.0
AagrBONN_evm.TU.Sc2ySwM_344.4431 Anthoceros agrestis HOM05D006124 ORTHO05D007854 8.0e-103 378.3 274 63.1
CAN.G1136.1 Capsicum annuum HOM05D006124 ORTHO05D007854 8.0e-103 378.3 246 71.5
MCO11G183 Micromonas commoda HOM05D006124 ORTHO05D007854 1.7e-97 360.5 424 44.8
PGSC0003DMG401027913 Solanum tuberosum HOM05D006124 ORTHO05D007854 5.2e-94 349.0 228 76.8
BolC5t29103H Brassica oleracea HOM05D006124 ORTHO05D007854 3.2e-91 339.7 273 63.0
Solyc08g028693.1 Solanum lycopersicum HOM05D006124 ORTHO05D007854 4.9e-84 315.8 182 81.9
Haze_26481 Corylus avellana HOM05D006124 ORTHO05D007854 1.7e-81 307.4 391 41.9
PRCOL_00001395 Prasinoderma coloniale HOM05D006124 ORTHO05D007854 6.4e-68 262.3 356 40.4
Cfa026643 Carpinus fangiana HOM05D006124 ORTHO05D007854 3.5e-66 256.5 445 34.8
Lj1A187G25 Lonicera japonica HOM05D006124 ORTHO05D007854 1.8e-57 227.6 311 43.4
HPP92_015146 Vanilla planifolia HOM05D006124 ORTHO05D007854 1.4e-30 138.3 91 71.4
Psat6g235520 Pisum sativum HOM05D006124 ORTHO05D001516 3.1e-22 110.5 74 67.6
BcaC09g51580 Brassica carinata HOM05D006124 ORTHO05D007854 7.7e-21 105.9 98 62.2
Peaxi162Scf00876g00016 Petunia axillaris HOM05D006124 ORTHO05D007854 2.2e-20 104.4 75 72.0
ECA247G2464 Erigeron canadensis HOM05D011992 ORTHO05D008321 8.0e-18 95.9 88 61.4
ClCG03G002310 Citrullus lanatus HOM05D006124 ORTHO05D150439 1.8e-14 84.7 133 39.8
Lj1A682T15 Lonicera japonica HOM05D006124 ORTHO05D007854 1.6e-13 81.6 41 78.0
RcHm_v2.0_Chr5g0060231 Rosa chinensis HOM05D006124 ORTHO05D007854 1.2e-10 72.0 49 69.4
HPP92_015147 Vanilla planifolia HOM05D006124 ORTHO05D007854 3.6e-10 70.5 59 66.1
ECA233G1860 Erigeron canadensis HOM05D000013 ORTHO05D000011 1.0e-09 68.9 88 48.9


User provided reference genes

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