Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib151G0047 Durio zibethinus HOM05D006635 ORTHO05D008047 2.9e-126 455.3 236 100.0
Gohir.D10G153800 Gossypium hirsutum HOM05D006635 ORTHO05D008047 2.4e-104 382.5 249 81.1
Gorai.011G171700 Gossypium raimondii HOM05D006635 ORTHO05D008047 2.4e-104 382.5 249 81.1
Gohir.A10G113600 Gossypium hirsutum HOM05D006635 ORTHO05D008047 6.9e-104 380.9 249 81.1
Thecc.04G246700 Theobroma cacao HOM05D006635 ORTHO05D008047 1.4e-101 373.2 260 78.5
COL.COLO4_15799 Corchorus olitorius HOM05D006635 ORTHO05D008047 6.2e-97 357.8 241 79.3
Haze_11307 Corylus avellana HOM05D006635 ORTHO05D008047 6.1e-84 314.7 249 67.1
Manes.15G037200 Manihot esculenta HOM05D006635 ORTHO05D008047 6.1e-84 314.7 257 65.8
Haze_11310 Corylus avellana HOM05D006635 ORTHO05D008047 7.9e-84 314.3 249 67.1
Ciclev10005689m.g Citrus clementina HOM05D006635 ORTHO05D008047 1.8e-83 313.2 249 67.1
CiPaw.01G189900 Carya illinoinensis HOM05D006635 ORTHO05D008047 1.1e-82 310.5 248 67.7
Ciclev10005690m.g Citrus clementina HOM05D006635 ORTHO05D008047 1.5e-82 310.1 248 68.1
GSVIVG01018125001 Vitis vinifera HOM05D006635 ORTHO05D008047 2.5e-82 309.3 252 66.7
Cfa008372 Carpinus fangiana HOM05D003636 ORTHO05D005160 4.3e-82 308.5 239 67.8
Ciclev10007171m.g Citrus clementina HOM05D006635 ORTHO05D008047 2.4e-80 302.8 208 74.0
Hma1.2p1_0650F.1_g195460 Hydrangea macrophylla HOM05D006635 ORTHO05D008047 2.4e-80 302.8 244 67.2
Atru.chr4.2211 Acer truncatum HOM05D006635 ORTHO05D008047 5.3e-80 301.6 256 62.5
CSS0008878 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 1.2e-79 300.4 256 64.5
Potri.010G075900 Populus trichocarpa HOM05D006635 ORTHO05D008047 2.2e-78 296.2 252 64.3
RcHm_v2.0_Chr1g0323991 Rosa chinensis HOM05D006635 ORTHO05D008047 2.9e-78 295.8 249 63.5
Prupe.1G031500 Prunus persica HOM05D006635 ORTHO05D008047 8.5e-78 294.3 259 62.9
Cpa.g.sc58.53 Carica papaya HOM05D006635 ORTHO05D008047 3.2e-77 292.4 216 71.8
Actinidia08441 Actinidia chinensis HOM05D006635 ORTHO05D008047 4.2e-77 292.0 250 65.2
MD13G1208000 Malus domestica HOM05D006635 ORTHO05D008047 4.2e-77 292.0 255 62.7
Eucgr.H03153 Eucalyptus grandis HOM05D006635 ORTHO05D008047 7.2e-77 291.2 255 63.9
FvH4_2g07190 Fragaria vesca HOM05D006635 ORTHO05D008047 9.4e-77 290.8 253 61.7
FAN24G3344 Fragaria x ananassa HOM05D006635 ORTHO05D008047 1.2e-76 290.4 253 61.7
Dinv29905 Davidia involucrata HOM05D006635 ORTHO05D008047 4.6e-76 288.5 258 62.0
Lj5g0017333 Lotus japonicus HOM05D006635 ORTHO05D008047 3.9e-75 285.4 250 62.4
Lalb_Chr02g0150381 Lupinus albus HOM05D006635 ORTHO05D008047 8.8e-75 284.3 259 61.8
FAN20G2319 Fragaria x ananassa HOM05D006635 ORTHO05D008047 1.1e-74 283.9 253 60.9
TWI53G1330 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 2.0e-74 283.1 249 63.5
TWI53G1448 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 2.0e-74 283.1 249 63.5
PSO832G2723 Papaver somniferum HOM05D006635 ORTHO05D008047 2.5e-74 282.7 254 60.6
Sc19g0003750 Simmondsia chinensis HOM05D006635 ORTHO05D008047 5.7e-74 281.6 264 58.7
Sopen06g018890 Solanum pennellii HOM05D006635 ORTHO05D008047 1.7e-73 280.0 251 62.5
Ca_09839_v3 Cicer arietinum L. HOM05D006635 ORTHO05D008047 2.2e-73 279.6 248 62.1
Sc19g0005210 Simmondsia chinensis HOM05D006635 ORTHO05D008047 2.8e-73 279.3 264 58.3
Solyc06g053770.4 Solanum lycopersicum HOM05D006635 ORTHO05D008047 3.7e-73 278.9 255 62.4
CANSAT78G1035 Cannabis sativa HOM05D006635 ORTHO05D008047 4.8e-73 278.5 250 62.0
PSO210G4915 Papaver somniferum HOM05D006635 ORTHO05D008047 8.2e-73 277.7 254 60.2
PGSC0003DMG400016282 Solanum tuberosum HOM05D006635 ORTHO05D008047 8.2e-73 277.7 252 62.7
Medtr1g075330 Medicago truncatula HOM05D006635 ORTHO05D008047 2.4e-72 276.2 248 62.1
Nn1g02620 Nelumbo nucifera HOM05D006635 ORTHO05D008047 2.4e-72 276.2 282 56.0
arahy.Tifrunner.gnm1.ann1.20YP49 Arachis hypogaea HOM05D006635 ORTHO05D008047 4.1e-72 275.4 252 60.3
arahy.Tifrunner.gnm1.ann1.P8HXAC Arachis hypogaea HOM05D006635 ORTHO05D008047 5.3e-72 275.0 252 59.9
Nitab4.5_0000302g0050 Nicotiana tabacum HOM05D006635 ORTHO05D008047 6.9e-72 274.6 264 61.0
ECA240G1129 Erigeron canadensis HOM05D000856 ORTHO05D002253 1.2e-71 273.9 251 59.8
Aqoxy5G00314 Aquilegia oxysepala HOM05D006635 ORTHO05D008047 7.7e-71 271.2 256 58.6
Cc03_g04920 Coffea canephora HOM05D006635 ORTHO05D008047 1.0e-70 270.8 261 59.8
THA.LOC104808600 Tarenaya hassleriana HOM05D006635 ORTHO05D008047 1.3e-70 270.4 256 59.4
Psat4g107880 Pisum sativum HOM05D006635 ORTHO05D008047 1.7e-70 270.0 250 61.6
CAN.G118.6 Capsicum annuum HOM05D006635 ORTHO05D008047 6.5e-70 268.1 257 60.7
Lj6A657T45 Lonicera japonica HOM05D006635 ORTHO05D008047 2.5e-69 266.2 252 60.3
FAN27G3431 Fragaria x ananassa HOM05D006635 ORTHO05D008047 3.2e-69 265.8 279 54.5
Migut.G00439 Erythranthe guttata HOM05D006635 ORTHO05D008047 4.2e-69 265.4 257 59.1
Glyma.20G205600 Glycine max HOM05D006635 ORTHO05D008047 5.5e-69 265.0 248 59.7
DCAR_027282 Daucus carota HOM05D006635 ORTHO05D008047 9.4e-69 264.2 244 61.1
Glyma.10G184800 Glycine max HOM05D006635 ORTHO05D008047 9.4e-69 264.2 248 59.3
HanXRQChr13g0424511 Helianthus annuus HOM05D006635 ORTHO05D008047 1.6e-68 263.5 248 59.3
QL06p015844 Quercus lobata HOM05D006635 ORTHO05D008047 2.7e-68 262.7 341 46.9
PGR004G0241 Punica granatum HOM05D006635 ORTHO05D008047 3.6e-68 262.3 254 58.3
Sp3g20780 Schrenkiella parvula HOM05D006635 ORTHO05D008047 2.3e-67 259.6 247 60.3
ClCG09G015590 Citrullus lanatus HOM05D006635 ORTHO05D008047 1.5e-66 256.9 242 58.3
Carub.0003s2327 Capsella rubella HOM05D006635 ORTHO05D008047 3.3e-66 255.8 260 57.7
vmacro15410 Vaccinium macrocarpon HOM05D006635 ORTHO05D008047 4.4e-66 255.4 302 52.0
CARHR099010 Cardamine hirsuta HOM05D006635 ORTHO05D008047 5.7e-66 255.0 254 58.7
Phvul.007G125600 Phaseolus vulgaris HOM05D006635 ORTHO05D008047 5.7e-66 255.0 253 57.3
Sed0017322 Sechium edule HOM05D006635 ORTHO05D008047 5.7e-66 255.0 225 60.0
AL3G37550 Arabidopsis lyrata HOM05D006635 ORTHO05D008047 1.3e-65 253.8 253 57.7
CsaV3_7G006710 Cucumis sativus L. HOM05D006635 ORTHO05D008047 4.8e-65 251.9 230 58.3
Lsat_1_v5_gn_3_122920 Lactuca sativa HOM05D006635 ORTHO05D008047 6.3e-65 251.5 213 62.0
BcaC09g49245 Brassica carinata HOM05D006635 ORTHO05D008047 8.2e-65 251.1 257 57.2
AUR62002251 Chenopodium quinoa HOM05D006635 ORTHO05D008047 1.4e-64 250.4 242 56.6
MSTRG.4101 Avicennia marina HOM05D006635 ORTHO05D008047 5.3e-64 248.4 210 62.4
MELO3C018624.2 Cucumis melo HOM05D006635 ORTHO05D008047 1.5e-63 246.9 236 57.6
Oeu058885.1 Olea europaea HOM05D006635 ORTHO05D008047 2.0e-63 246.5 225 60.4
AT3G23100 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 2.6e-63 246.1 256 55.9
CSS0031458 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 5.9e-63 245.0 275 53.8
CDE04G0173 Ceratophyllum demersum HOM05D006635 ORTHO05D008047 1.7e-62 243.4 229 59.4
Nitab4.5_0008721g0010 Nicotiana tabacum HOM05D006635 ORTHO05D008047 8.5e-62 241.1 255 57.6
VMungo0720G1578 Vigna mungo HOM05D006635 ORTHO05D008047 9.4e-61 237.7 253 55.3
Hund11856 Selenicereus undatus HOM05D006635 ORTHO05D008047 1.2e-60 237.3 248 54.4
HPP92_023529 Vanilla planifolia HOM05D006635 ORTHO05D008047 1.2e-60 237.3 266 53.4
Os03g0740800 Oryza sativa ssp. japonica HOM05D006635 ORTHO05D008047 1.6e-60 236.9 265 52.1
ATR0824G049 Amborella trichopoda HOM05D006635 ORTHO05D008047 1.4e-59 233.8 231 52.8
Peaxi162Scf00325g00713 Petunia axillaris HOM05D006635 ORTHO05D008047 2.3e-59 233.0 251 57.4
Ah.13g066120 Amaranthus hybridus HOM05D006635 ORTHO05D008047 5.2e-59 231.9 224 54.9
Zm00001eb056730 Zea mays HOM05D006635 ORTHO05D008047 6.7e-59 231.5 261 50.6
BcaB04g20471 Brassica carinata HOM05D006635 ORTHO05D008047 2.6e-58 229.6 207 58.9
A01p31980 Brassica napus HOM05D006635 ORTHO05D008047 1.7e-57 226.9 206 57.8
BraA01t03324Z Brassica rapa HOM05D006635 ORTHO05D008047 1.7e-57 226.9 206 57.8
EL10Ac3g05891 Beta vulgaris HOM05D006635 ORTHO05D008047 1.2e-55 220.7 255 52.9
Sabra10G0032800 Salix brachista HOM05D006635 ORTHO05D008047 1.5e-53 213.8 445 36.0
BolC1t04048H Brassica oleracea HOM05D006635 ORTHO05D008047 1.9e-53 213.4 179 60.9
Aa31LG8G9580 Aethionema arabicum HOM05D006635 ORTHO05D008047 1.7e-49 200.3 277 46.2
MBI19_g38372_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 2.2e-49 199.9 232 54.3
Thhalv10022194m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 3.1e-48 196.1 254 48.8
PGR102G1543 Punica granatum HOM05D006635 ORTHO05D008047 6.5e-46 188.3 233 50.2
C01p40990 Brassica napus HOM05D006635 ORTHO05D008047 1.7e-38 163.7 138 59.4
AUR62015462 Chenopodium quinoa HOM05D006635 ORTHO05D008047 2.5e-37 159.8 156 57.7
PGR004G0922 Punica granatum HOM05D006635 ORTHO05D008047 5.6e-37 158.7 155 56.1
TAR636G0517 Trochodendron aralioides HOM05D006635 ORTHO05D008047 3.0e-35 152.9 117 71.8
Mapoly0014s0074 Marchantia polymorpha HOM05D006635 ORTHO05D008047 1.1e-29 134.4 193 38.3
PGR083G1020 Punica granatum HOM05D006635 ORTHO05D008047 1.4e-27 127.5 255 39.2
AagrBONN_evm.TU.Sc2ySwM_228.5661 Anthoceros agrestis HOM05D006635 ORTHO05D008047 4.1e-24 115.9 200 37.0
CBR_g33918 Chara braunii HOM05D006635 ORTHO05D008047 8.6e-22 108.2 169 38.5
Ciclev10029925m.g Citrus clementina HOM05D006635 ORTHO05D008047 1.2e-20 104.4 112 51.8
AT1G61410 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 1.4e-19 100.9 127 55.1
MBI19_g44428_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 1.5e-18 97.4 131 44.3
TPR.G27195 Trifolium pratense HOM05D006635 ORTHO05D008047 5.8e-18 95.5 89 56.2
Oeu058884.1 Olea europaea HOM05D001680 ORTHO05D001596 7.5e-18 95.1 105 51.4
Pp3c14_21160 Physcomitrium patens HOM05D006635 ORTHO05D008047 2.9e-17 93.2 189 32.3
Pp3c1_38430 Physcomitrium patens HOM05D006635 ORTHO05D008047 1.4e-16 90.9 201 29.9
SEGI_02340 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 1.9e-16 90.5 84 60.7
TAR636G2119 Trochodendron aralioides HOM05D006635 ORTHO05D008047 2.7e-15 86.7 94 50.0
C01p40960 Brassica napus HOM05D006635 ORTHO05D008047 2.5e-13 80.1 95 51.6
Thhalv10021924m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 1.2e-12 77.8 83 53.0


User provided reference genes

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