Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv38921 Davidia involucrata HOM05D003441 ORTHO05D045117 2.7e-100 368.6 181 100.0
Cpa.g.sc180.13 Carica papaya HOM05D003441 ORTHO05D004516 3.3e-45 185.7 353 39.1
CANSAT25G0732 Cannabis sativa HOM05D003441 ORTHO05D004516 5.5e-45 184.9 353 39.4
Eucgr.E00638 Eucalyptus grandis HOM05D003441 ORTHO05D004516 9.5e-45 184.1 353 38.8
Actinidia28364 Actinidia chinensis HOM05D003441 ORTHO05D004516 1.6e-44 183.3 353 39.4
EL10Ac5g12531 Beta vulgaris HOM05D003441 ORTHO05D004516 1.6e-44 183.3 353 38.8
Carub.0007s3411 Capsella rubella HOM05D003441 ORTHO05D004516 1.6e-44 183.3 353 38.8
MD06G1087900 Malus domestica HOM05D003441 ORTHO05D004516 1.6e-44 183.3 353 39.1
Atru.chr9.2153 Acer truncatum HOM05D003441 ORTHO05D004516 2.1e-44 183.0 353 38.5
Cc08_g15010 Coffea canephora HOM05D003441 ORTHO05D004516 2.1e-44 183.0 353 38.8
COL.COLO4_34498 Corchorus olitorius HOM05D003441 ORTHO05D004516 2.1e-44 183.0 353 38.5
Duzib084G0223 Durio zibethinus HOM05D003441 ORTHO05D004516 2.1e-44 183.0 353 38.5
THA.LOC104817891 Tarenaya hassleriana HOM05D003441 ORTHO05D004516 2.1e-44 183.0 353 38.8
CSS0029160 Camellia sinensis var. sinensis HOM05D003441 ORTHO05D004516 2.8e-44 182.6 353 39.1
CSS0043381 Camellia sinensis var. sinensis HOM05D003441 ORTHO05D004516 2.8e-44 182.6 353 39.1
ClCG01G002520 Citrullus lanatus HOM05D003441 ORTHO05D004516 2.8e-44 182.6 353 38.5
MELO3C005694.2 Cucumis melo HOM05D003441 ORTHO05D004516 2.8e-44 182.6 353 38.5
CsaV3_5G002620 Cucumis sativus L. HOM05D003441 ORTHO05D004516 2.8e-44 182.6 353 38.5
DCAR_005566 Daucus carota HOM05D003441 ORTHO05D004516 2.8e-44 182.6 353 38.5
VMungo0251G2080 Vigna mungo HOM05D003441 ORTHO05D004516 2.8e-44 182.6 353 38.8
Aa31LG5G13590 Aethionema arabicum HOM05D003441 ORTHO05D004516 3.6e-44 182.2 353 38.5
AL7G48050 Arabidopsis lyrata HOM05D003441 ORTHO05D004516 3.6e-44 182.2 353 38.5
AT5G41370 Arabidopsis thaliana HOM05D003441 ORTHO05D004516 3.6e-44 182.2 353 38.5
CARHR212960 Cardamine hirsuta HOM05D003441 ORTHO05D004516 3.6e-44 182.2 353 38.5
Glyma.05G209700 Glycine max HOM05D003441 ORTHO05D004516 3.6e-44 182.2 353 38.5
Glyma.08G016400 Glycine max HOM05D003441 ORTHO05D004516 3.6e-44 182.2 353 38.5
HanXRQChr17g0533461 Helianthus annuus HOM05D003441 ORTHO05D004516 3.6e-44 182.2 353 38.5
PGR042G0359 Punica granatum HOM05D003441 ORTHO05D004516 3.6e-44 182.2 353 39.4
SGA_v2.0_scaffold144G35916 Striga asiatica HOM05D003441 ORTHO05D004516 3.6e-44 182.2 353 39.1
Ca_10937_v3 Cicer arietinum L. HOM05D003441 ORTHO05D004516 4.7e-44 181.8 353 38.5
Thecc.03G282800 Theobroma cacao HOM05D003441 ORTHO05D004516 4.7e-44 181.8 353 38.2
AUR62010445 Chenopodium quinoa HOM05D003441 ORTHO05D004516 6.1e-44 181.4 353 38.5
Haze_08814 Corylus avellana HOM05D003441 ORTHO05D004516 6.1e-44 181.4 353 38.2
Lsat_1_v5_gn_2_120601 Lactuca sativa HOM05D003441 ORTHO05D004516 6.1e-44 181.4 326 40.5
Lalb_Chr05g0224631 Lupinus albus HOM05D003441 ORTHO05D004516 6.1e-44 181.4 353 38.2
Lalb_Chr16g0390181 Lupinus albus HOM05D003441 ORTHO05D004516 6.1e-44 181.4 353 38.2
Medtr8g098675 Medicago truncatula HOM05D003441 ORTHO05D004516 6.1e-44 181.4 353 38.2
Phvul.002G291500 Phaseolus vulgaris HOM05D003441 ORTHO05D004516 6.1e-44 181.4 353 38.5
Prupe.5G104000 Prunus persica HOM05D003441 ORTHO05D004516 6.1e-44 181.4 353 38.5
TWI81G0502 Tripterygium wilfordii HOM05D003441 ORTHO05D004516 6.1e-44 181.4 353 38.8
GSVIVG01019392001 Vitis vinifera HOM05D003441 ORTHO05D004516 6.1e-44 181.4 353 38.8
AL7G48070 Arabidopsis lyrata HOM05D003441 ORTHO05D004516 8.0e-44 181.0 353 38.2
Gohir.D03G149600 Gossypium hirsutum HOM05D003441 ORTHO05D004516 8.0e-44 181.0 353 38.2
HanXRQChr06g0165951 Helianthus annuus HOM05D003441 ORTHO05D004516 8.0e-44 181.0 353 38.5
QL12p032410 Quercus lobata HOM05D003441 ORTHO05D004516 8.0e-44 181.0 353 38.0
Hund10975 Selenicereus undatus HOM05D003441 ORTHO05D004516 8.0e-44 181.0 353 38.2
Solyc08g081340.4 Solanum lycopersicum HOM05D003441 ORTHO05D004516 8.0e-44 181.0 353 38.2
Sopen08g029660 Solanum pennellii HOM05D003441 ORTHO05D004516 8.0e-44 181.0 353 38.2
PGSC0003DMG400012332 Solanum tuberosum HOM05D003441 ORTHO05D004516 8.0e-44 181.0 353 38.2
Lj8A218G25 Lonicera japonica HOM05D003441 ORTHO05D004516 1.0e-43 180.6 353 38.2
Peaxi162Scf00074g02032 Petunia axillaris HOM05D003441 ORTHO05D004516 1.0e-43 180.6 353 38.0
Sed0019074 Sechium edule HOM05D003441 ORTHO05D004516 1.0e-43 180.6 353 38.0
Sc07g0009820 Simmondsia chinensis HOM05D003441 ORTHO05D004516 1.0e-43 180.6 353 38.5
AUR62030470 Chenopodium quinoa HOM05D003441 ORTHO05D004516 1.4e-43 180.3 353 38.5
Duzib205G0291 Durio zibethinus HOM05D003441 ORTHO05D004516 1.4e-43 180.3 353 38.2
Oeu030097.4 Olea europaea HOM05D003441 ORTHO05D004516 1.8e-43 179.9 353 38.2
RcHm_v2.0_Chr1g0341621 Rosa chinensis HOM05D003441 ORTHO05D004516 1.8e-43 179.9 346 36.1
Ah.12g058870 Amaranthus hybridus HOM05D003441 ORTHO05D004516 2.3e-43 179.5 353 38.0
Lsat_1_v5_gn_3_6121 Lactuca sativa HOM05D003441 ORTHO05D004516 2.3e-43 179.5 353 38.2
RcHm_v2.0_Chr7g0197061 Rosa chinensis HOM05D003441 ORTHO05D004516 2.3e-43 179.5 353 38.2
Thhalv10027651m.g Eutrema salsugineum HOM05D003441 ORTHO05D004516 3.0e-43 179.1 353 38.0
Gohir.A11G022800 Gossypium hirsutum HOM05D003441 ORTHO05D004516 3.0e-43 179.1 353 38.5
Gorai.007G023800 Gossypium raimondii HOM05D003441 ORTHO05D004516 3.0e-43 179.1 353 38.5
Manes.02G021700 Manihot esculenta HOM05D003441 ORTHO05D004516 3.0e-43 179.1 353 38.0
Sp7g00580 Schrenkiella parvula HOM05D003441 ORTHO05D004516 3.0e-43 179.1 353 38.0
SpUn0010_0060 Schrenkiella parvula HOM05D003441 ORTHO05D004516 3.0e-43 179.1 353 38.0
TWI15G1203 Tripterygium wilfordii HOM05D003441 ORTHO05D004516 3.0e-43 179.1 353 38.0
Nitab4.5_0001220g0100 Nicotiana tabacum HOM05D003441 ORTHO05D004516 4.0e-43 178.7 353 37.7
Potri.001G101300 Populus trichocarpa HOM05D003441 ORTHO05D004516 4.0e-43 178.7 353 38.2
Sabra01G0076300 Salix brachista HOM05D003441 ORTHO05D004516 4.0e-43 178.7 353 38.2
TWI15G1061 Tripterygium wilfordii HOM05D003441 ORTHO05D004516 4.0e-43 178.7 353 38.0
FvH4_5g02840 Fragaria vesca HOM05D003441 ORTHO05D004516 5.2e-43 178.3 353 38.0
FAN04G2979 Fragaria x ananassa HOM05D003441 ORTHO05D004516 5.2e-43 178.3 353 38.0
FAN08G0848 Fragaria x ananassa HOM05D003441 ORTHO05D004516 5.2e-43 178.3 353 38.0
FAN13G0786 Fragaria x ananassa HOM05D003441 ORTHO05D004516 5.2e-43 178.3 353 38.0
FAN18G3267 Fragaria x ananassa HOM05D003441 ORTHO05D004516 5.2e-43 178.3 353 38.0
Lj2C182G1 Lonicera japonica HOM05D003441 ORTHO05D004516 5.2e-43 178.3 353 38.2
arahy.Tifrunner.gnm1.ann1.5RI6ER Arachis hypogaea HOM05D003441 ORTHO05D004516 6.8e-43 177.9 353 37.7
MSTRG.11971 Avicennia marina HOM05D003441 ORTHO05D004516 6.8e-43 177.9 353 38.8
CiPaw.12G091100 Carya illinoinensis HOM05D003441 ORTHO05D004516 6.8e-43 177.9 354 37.9
Psat7g031680 Pisum sativum HOM05D003441 ORTHO05D004516 6.8e-43 177.9 353 37.7
TAR636G0201 Trochodendron aralioides HOM05D003441 ORTHO05D004516 6.8e-43 177.9 353 38.0
CAN.G532.8 Capsicum annuum HOM05D003441 ORTHO05D004516 8.9e-43 177.6 353 37.7
Dinv37619 Davidia involucrata HOM05D003441 ORTHO05D004516 8.9e-43 177.6 353 38.0
Carub.0007s3412 Capsella rubella HOM05D003441 ORTHO05D004516 1.2e-42 177.2 353 38.2
Lj4g0015025 Lotus japonicus HOM05D003441 ORTHO05D004516 1.2e-42 177.2 353 37.7
SalBow1G4213 Salvia bowleyana HOM05D003441 ORTHO05D004516 1.5e-42 176.8 353 38.5
AT5G41360 Arabidopsis thaliana HOM05D003441 ORTHO05D004516 3.4e-42 175.6 353 37.7
ECA246G2088 Erigeron canadensis HOM05D003441 ORTHO05D004516 4.4e-42 175.3 353 37.4
Migut.E01191 Erythranthe guttata HOM05D003441 ORTHO05D004516 4.4e-42 175.3 353 38.0
MBI04_g41820_MAGBIO Magnolia biondii HOM05D003441 ORTHO05D004516 4.4e-42 175.3 353 38.2
Nn6g33339 Nelumbo nucifera HOM05D003441 ORTHO05D004516 5.7e-42 174.9 353 38.0
BcaB06g27616 Brassica carinata HOM05D003441 ORTHO05D004516 9.8e-42 174.1 353 37.4
BcaC02g08964 Brassica carinata HOM05D003441 ORTHO05D004516 9.8e-42 174.1 353 37.4
A04p14500 Brassica napus HOM05D003441 ORTHO05D004516 9.8e-42 174.1 353 37.4
C04p48400 Brassica napus HOM05D003441 ORTHO05D004516 9.8e-42 174.1 353 37.4
BolC4t26434H Brassica oleracea HOM05D003441 ORTHO05D004516 9.8e-42 174.1 353 37.4
BraA04t17095Z Brassica rapa HOM05D003441 ORTHO05D004516 9.8e-42 174.1 353 37.4
Os01g0691600 Oryza sativa ssp. japonica HOM05D003441 ORTHO05D004516 1.3e-41 173.7 353 37.4
PSO478G5020 Papaver somniferum HOM05D003441 ORTHO05D004516 1.7e-41 173.3 353 37.4
SEGI_31025 Sequoiadendron giganteum HOM05D003441 ORTHO05D004516 1.7e-41 173.3 353 38.0
HPP92_021979 Vanilla planifolia HOM05D003441 ORTHO05D004516 1.7e-41 173.3 353 38.0
ATR0661G194 Amborella trichopoda HOM05D003441 ORTHO05D004516 2.2e-41 172.9 353 37.1
CARHR183180 Cardamine hirsuta HOM05D003441 ORTHO05D004516 2.2e-41 172.9 350 37.7
CDE12G0607 Ceratophyllum demersum HOM05D003441 ORTHO05D004516 2.8e-41 172.6 354 37.3
Gohir.A03G019400 Gossypium hirsutum HOM05D003441 ORTHO05D004516 3.7e-41 172.2 367 37.1
Zm00001eb156220 Zea mays HOM05D003441 ORTHO05D004516 4.9e-41 171.8 351 37.9
arahy.Tifrunner.gnm1.ann1.75Q964 Arachis hypogaea HOM05D003441 ORTHO05D004516 6.3e-41 171.4 340 37.6
SMO115G0252 Selaginella moellendorffii HOM05D003441 ORTHO05D004516 6.3e-41 171.4 352 37.2
Gorai.003G156900 Gossypium raimondii HOM05D003441 ORTHO05D004516 8.3e-41 171.0 379 35.6
AagrBONN_evm.TU.Sc2ySwM_368.2338 Anthoceros agrestis HOM05D003441 ORTHO05D004516 1.1e-40 170.6 353 37.1
Nitab4.5_0001522g0040 Nicotiana tabacum HOM05D003441 ORTHO05D004516 1.4e-40 170.2 369 36.0
Aqoxy5G02024 Aquilegia oxysepala HOM05D003441 ORTHO05D004516 3.1e-40 169.1 357 37.3
BcaC08g44524 Brassica carinata HOM05D003441 ORTHO05D004516 3.1e-40 169.1 169 58.0
Aqoxy1G00680 Aquilegia oxysepala HOM05D003441 ORTHO05D004516 4.1e-40 168.7 353 37.1
TPR.G12826 Trifolium pratense HOM05D003441 ORTHO05D004516 4.1e-40 168.7 162 59.3
BcaB02g07896 Brassica carinata HOM05D003441 ORTHO05D004516 5.4e-40 168.3 353 37.4
BolC6t37164H Brassica oleracea HOM05D003441 ORTHO05D004516 5.4e-40 168.3 169 58.0
Rhsim02G0234100 Rhododendron simsii HOM05D003441 ORTHO05D004516 5.4e-40 168.3 162 59.9
Mapoly0037s0100 Marchantia polymorpha HOM05D003441 ORTHO05D004516 9.2e-40 167.5 353 35.1
Cfa012202 Carpinus fangiana HOM05D003441 ORTHO05D004516 1.6e-39 166.8 162 58.6
PSO017G3334 Papaver somniferum HOM05D003441 ORTHO05D004516 2.7e-39 166.0 353 36.3
PSO421G0274 Papaver somniferum HOM05D003441 ORTHO05D004516 2.7e-39 166.0 353 36.3
PGSC0003DMG400026783 Solanum tuberosum HOM05D003441 ORTHO05D004516 3.5e-39 165.6 347 36.6
A07p20760 Brassica napus HOM05D003441 ORTHO05D004516 4.5e-39 165.2 169 56.8
BraA07t29768Z Brassica rapa HOM05D003441 ORTHO05D004516 4.5e-39 165.2 169 56.8
FAN10G3500 Fragaria x ananassa HOM05D003441 ORTHO05D004516 4.5e-39 165.2 352 36.4
FvH4_7g08220 Fragaria vesca HOM05D003441 ORTHO05D004516 3.9e-38 162.2 353 35.7
Nitab4.5_0002290g0010 Nicotiana tabacum HOM05D003441 ORTHO05D004516 3.9e-38 162.2 355 36.1
Nitab4.5_0004008g0010 Nicotiana tabacum HOM05D003441 ORTHO05D004516 3.9e-38 162.2 355 35.8
Pp3c6_13890 Physcomitrium patens HOM05D003441 ORTHO05D004516 3.9e-38 162.2 353 36.3
FAN01G0379 Fragaria x ananassa HOM05D003441 ORTHO05D004516 8.6e-38 161.0 354 35.6
SMO347G0324 Selaginella moellendorffii HOM05D003441 ORTHO05D004516 8.6e-38 161.0 352 35.5
FAN03G2549 Fragaria x ananassa HOM05D003441 ORTHO05D004516 7.3e-37 157.9 163 55.8
FAN06G2516 Fragaria x ananassa HOM05D003441 ORTHO05D004516 9.5e-37 157.5 162 55.6
AUR62022736 Chenopodium quinoa HOM05D003441 ORTHO05D004516 8.0e-36 154.5 168 54.2
Ciclev10019088m.g Citrus clementina HOM05D003441 ORTHO05D004516 8.0e-36 154.5 326 36.8
ECA246G1863 Erigeron canadensis HOM05D003441 ORTHO05D004516 1.4e-35 153.7 353 35.1
SHI07186 Sapria himalayana HOM05D003441 ORTHO05D004516 1.8e-35 153.3 268 40.3
Gohir.D11G022333 Gossypium hirsutum HOM05D003441 ORTHO05D004516 2.3e-35 152.9 268 40.3
SalBow1G5824 Salvia bowleyana HOM05D003441 ORTHO05D004516 2.9e-33 146.0 277 38.3
HPP92_022012 Vanilla planifolia HOM05D003441 ORTHO05D004516 3.7e-33 145.6 349 35.0
Cre06.g297016 Chlamydomonas reinhardtii HOM05D003441 ORTHO05D004516 1.9e-32 143.3 169 49.7
MCO01G486 Micromonas commoda HOM05D003441 ORTHO05D004516 1.0e-30 137.5 162 48.8
FvH4_7g07850 Fragaria vesca HOM05D003441 ORTHO05D004516 1.7e-30 136.7 337 34.4
PRCOL_00001151 Prasinoderma coloniale HOM05D003441 ORTHO05D004516 3.9e-30 135.6 350 31.1
RcHm_v2.0_Chr1g0341861 Rosa chinensis HOM05D003441 ORTHO05D004516 8.6e-30 134.4 147 53.7
Lsat_1_v5_gn_2_120581 Lactuca sativa HOM05D003441 ORTHO05D004516 1.1e-29 134.0 192 44.8
SMO166G0028 Selaginella moellendorffii HOM05D003441 ORTHO05D045117 2.5e-29 132.9 78 80.8
Nitab4.5_0004114g0020 Nicotiana tabacum HOM05D003441 ORTHO05D004516 7.3e-29 131.3 308 34.1
RcHm_v2.0_Chr7g0203931 Rosa chinensis HOM05D003441 ORTHO05D004516 7.3e-29 131.3 170 45.3
C06p19750 Brassica napus HOM05D003441 ORTHO05D004516 6.2e-28 128.3 251 37.5
FAN04G2533 Fragaria x ananassa HOM05D003441 ORTHO05D004516 8.9e-27 124.4 169 45.0
FAN08G2634 Fragaria x ananassa HOM05D003441 ORTHO05D004516 1.5e-26 123.6 165 45.5
Haze_26458 Corylus avellana HOM05D003441 ORTHO05D004516 2.6e-26 122.9 168 43.5
CBR_g34305 Chara braunii HOM05D003441 ORTHO05D004516 4.9e-25 118.6 306 31.4
FvH4_5g19420 Fragaria vesca HOM05D003441 ORTHO05D004516 2.1e-23 113.2 169 43.2
FAN18G4545 Fragaria x ananassa HOM05D003441 ORTHO05D004516 1.0e-22 110.9 120 49.2
Cfa023957 Carpinus fangiana HOM05D003441 ORTHO05D004516 3.0e-22 109.4 177 40.1
SMO115G0114 Selaginella moellendorffii HOM05D003441 ORTHO05D044017 3.7e-17 92.4 66 68.2
FAN06G0185 Fragaria x ananassa HOM05D003441 ORTHO05D004516 6.0e-15 85.1 179 38.0
unitig_62.g23538 Utricularia gibba HOM05D003441 ORTHO05D004516 1.0e-14 84.3 227 32.6
QL02p047919 Quercus lobata HOM05D003441 ORTHO05D004516 1.1e-13 80.9 42 92.9
QL02p047967 Quercus lobata HOM05D003441 ORTHO05D004516 9.6e-13 77.8 42 88.1
FAN13G0171 Fragaria x ananassa HOM05D003441 ORTHO05D004516 3.6e-12 75.9 153 37.3
CDE04G1391 Ceratophyllum demersum HOM05D003441 ORTHO05D129623 1.1e-11 74.3 52 73.1
Glyma.08G323500 Glycine max HOM05D003441 ORTHO05D004516 3.1e-11 72.8 46 73.9
MBI04_g35068_MAGBIO Magnolia biondii HOM05D003441 ORTHO05D004516 5.2e-11 72.0 46 73.9
TPR.G33074 Trifolium pratense HOM05D003441 ORTHO05D004516 1.3e-09 67.4 42 73.8
vmacro11393 Vaccinium macrocarpon HOM05D003441 ORTHO05D004516 1.7e-09 67.0 41 75.6
AUR62006323 Chenopodium quinoa HOM05D003441 ORTHO05D044017 2.2e-09 66.6 84 46.4
BcaC08g44523 Brassica carinata HOM05D003441 ORTHO05D004516 1.9e-08 63.5 65 53.8
BolC6t37163H Brassica oleracea HOM05D003441 ORTHO05D004516 2.4e-08 63.2 65 53.8
SEGI_39024 Sequoiadendron giganteum HOM05D003441 ORTHO05D004516 1.3e-06 57.4 39 64.1
AUR62004519 Chenopodium quinoa HOM05D003441 ORTHO05D004516 6.6e-06 55.1 120 35.0
Lsat_1_v5_gn_7_95160 Lactuca sativa HOM05D003441 ORTHO05D005003 8.7e-06 54.7 52 50.0


User provided reference genes

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