Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv28205 Davidia involucrata HOM05D006375 ORTHO05D008188 0.0e+00 1186.8 604 100.0
CSS0034734 Camellia sinensis var. sinensis HOM05D006375 ORTHO05D008188 1.1e-249 866.7 715 66.2
Actinidia06495 Actinidia chinensis HOM05D006375 ORTHO05D008188 3.0e-228 795.4 714 62.5
Hma1.2p1_0158F.1_g070200 Hydrangea macrophylla HOM05D006375 ORTHO05D008188 3.2e-222 775.4 715 61.3
Rhsim10G0177200 Rhododendron simsii HOM05D006375 ORTHO05D008188 8.7e-220 767.3 715 59.3
Cfa007814 Carpinus fangiana HOM05D006375 ORTHO05D008188 5.9e-216 754.6 715 59.3
CiPaw.03G071800 Carya illinoinensis HOM05D006375 ORTHO05D008188 1.7e-215 753.1 650 62.9
Hma1.2p1_0158F.1_g070190 Hydrangea macrophylla HOM05D006375 ORTHO05D008188 6.5e-215 751.1 701 60.3
QL02p058134 Quercus lobata HOM05D006375 ORTHO05D008188 2.3e-212 742.7 713 57.9
TAR374G0480 Trochodendron aralioides HOM05D006375 ORTHO05D008188 4.3e-211 738.4 710 59.7
QL93p0100_0515 Quercus lobata HOM05D006375 ORTHO05D008188 2.2e-210 736.1 713 57.8
Haze_14261 Corylus avellana HOM05D006375 ORTHO05D008188 1.7e-207 726.5 767 55.3
Thecc.04G114800 Theobroma cacao HOM05D006375 ORTHO05D008188 1.9e-206 723.0 718 56.5
Lj4C263T11 Lonicera japonica HOM05D006375 ORTHO05D008188 1.5e-203 713.4 717 56.3
Potri.004G087400 Populus trichocarpa HOM05D006375 ORTHO05D008188 3.4e-200 702.2 710 56.8
Ciclev10010990m.g Citrus clementina HOM05D006375 ORTHO05D008188 1.1e-198 697.2 704 56.1
vmacro07694 Vaccinium macrocarpon HOM05D006375 ORTHO05D008188 5.3e-193 678.3 726 55.1
COL.COLO4_05994 Corchorus olitorius HOM05D006375 ORTHO05D008188 2.6e-192 676.0 699 54.6
CSS0009955 Camellia sinensis var. sinensis HOM05D006375 ORTHO05D008188 3.5e-192 675.6 600 62.2
Nn3g18305 Nelumbo nucifera HOM05D006375 ORTHO05D008188 2.5e-190 669.5 713 54.4
Gohir.A07G078100 Gossypium hirsutum HOM05D006375 ORTHO05D008188 5.5e-190 668.3 705 54.9
Manes.01G118300 Manihot esculenta HOM05D006375 ORTHO05D008188 1.0e-188 664.1 711 53.0
RcHm_v2.0_Chr3g0493161 Rosa chinensis HOM05D006375 ORTHO05D008188 1.2e-187 660.6 709 53.6
Gohir.D07G082900 Gossypium hirsutum HOM05D006375 ORTHO05D008188 1.3e-186 657.1 694 54.6
Gorai.001G088500 Gossypium raimondii HOM05D006375 ORTHO05D008188 1.7e-186 656.8 694 54.5
CANSAT64G0280 Cannabis sativa HOM05D006375 ORTHO05D008188 4.5e-184 648.7 714 52.8
Nitab4.5_0010112g0040 Nicotiana tabacum HOM05D006375 ORTHO05D008188 3.8e-183 645.6 710 53.5
Sabra04G0058300 Salix brachista HOM05D006375 ORTHO05D008188 1.1e-182 644.0 710 53.1
GSVIVG01030782001 Vitis vinifera HOM05D006375 ORTHO05D008188 1.1e-182 644.0 648 57.7
Nitab4.5_0000201g0170 Nicotiana tabacum HOM05D006375 ORTHO05D008188 4.4e-179 632.1 710 52.1
MSTRG.2615 Avicennia marina HOM05D006375 ORTHO05D008188 8.3e-178 627.9 704 53.3
arahy.Tifrunner.gnm1.ann1.WVM8AG Arachis hypogaea HOM05D006375 ORTHO05D008188 1.8e-177 626.7 700 51.3
Atru.chr1.1908 Acer truncatum HOM05D006375 ORTHO05D008188 9.1e-177 624.4 700 53.1
DCAR_003431 Daucus carota HOM05D006375 ORTHO05D008188 9.1e-177 624.4 710 52.1
arahy.Tifrunner.gnm1.ann1.EH3TRU Arachis hypogaea HOM05D006375 ORTHO05D008188 2.0e-176 623.2 718 50.7
Sc14g0006560 Simmondsia chinensis HOM05D006375 ORTHO05D008188 5.9e-176 621.7 717 52.2
ClCG01G008800 Citrullus lanatus HOM05D006375 ORTHO05D008188 1.3e-175 620.5 696 51.6
Sed0006511 Sechium edule HOM05D006375 ORTHO05D008188 2.9e-175 619.4 712 50.3
SGA_v2.0_scaffold2G00936 Striga asiatica HOM05D006375 ORTHO05D008188 2.9e-175 619.4 718 51.4
SalBow3G0693 Salvia bowleyana HOM05D006375 ORTHO05D008188 3.8e-175 619.0 712 51.5
Glyma.14G214000 Glycine max HOM05D006375 ORTHO05D008188 5.5e-174 615.1 710 51.4
LjContig00141g0022245 Lotus japonicus HOM05D006375 ORTHO05D008188 2.1e-173 613.2 710 51.1
PGSC0003DMG400015671 Solanum tuberosum HOM05D006375 ORTHO05D008188 2.8e-173 612.8 708 51.1
Lalb_Chr04g0251361 Lupinus albus HOM05D006375 ORTHO05D008188 4.0e-172 609.0 710 50.4
VMungo0647G2002 Vigna mungo HOM05D006375 ORTHO05D008188 6.8e-172 608.2 710 51.5
Sopen11g005910 Solanum pennellii HOM05D006375 ORTHO05D008188 1.2e-171 607.4 708 50.7
Solyc11g011150.2 Solanum lycopersicum HOM05D006375 ORTHO05D008188 2.0e-171 606.7 708 50.7
PSO478G2715 Papaver somniferum HOM05D006375 ORTHO05D008188 2.2e-170 603.2 736 49.5
MD17G1258300 Malus domestica HOM05D006375 ORTHO05D008188 2.8e-170 602.8 706 52.3
FvH4_1g28770 Fragaria vesca HOM05D006375 ORTHO05D008188 1.1e-169 600.9 707 49.6
TPR.G8261 Trifolium pratense HOM05D006375 ORTHO05D008188 2.4e-169 599.7 711 50.6
TWI74G0084 Tripterygium wilfordii HOM05D006375 ORTHO05D008188 4.1e-169 599.0 712 50.3
CsaV3_5G024160 Cucumis sativus L. HOM05D006375 ORTHO05D008188 1.2e-168 597.4 716 49.7
TWI53G2003 Tripterygium wilfordii HOM05D006375 ORTHO05D008188 2.0e-168 596.7 712 50.1
PSO017G5819 Papaver somniferum HOM05D006375 ORTHO05D008188 4.5e-168 595.5 728 49.9
MELO3C022863.2 Cucumis melo HOM05D006375 ORTHO05D008188 5.9e-168 595.1 736 48.4
Psat2g047400 Pisum sativum HOM05D006375 ORTHO05D008188 7.8e-168 594.7 699 50.9
FAN23G0218 Fragaria x ananassa HOM05D006375 ORTHO05D008188 2.5e-166 589.7 742 48.1
Medtr5g078360 Medicago truncatula HOM05D006375 ORTHO05D008188 2.5e-166 589.7 711 50.1
Aqoxy3G00081 Aquilegia oxysepala HOM05D006375 ORTHO05D008188 1.2e-165 587.4 713 50.4
Hund04476 Selenicereus undatus HOM05D006375 ORTHO05D008188 6.1e-165 585.1 714 48.7
Prupe.3G161000 Prunus persica HOM05D006375 ORTHO05D008188 1.8e-164 583.6 713 49.6
HanXRQChr14g0444701 Helianthus annuus HOM05D006375 ORTHO05D008188 1.2e-163 580.9 715 48.1
ECA238G1164 Erigeron canadensis HOM05D006375 ORTHO05D008188 5.8e-163 578.6 717 49.1
EL10Ac6g15274 Beta vulgaris HOM05D006375 ORTHO05D008188 1.3e-162 577.4 712 49.0
Cpa.g.sc116.55 Carica papaya HOM05D006375 ORTHO05D008188 2.4e-161 573.2 638 53.4
PGR004G2253 Punica granatum HOM05D006375 ORTHO05D008188 2.0e-160 570.1 705 48.9
Migut.H02262 Erythranthe guttata HOM05D006375 ORTHO05D008188 2.7e-160 569.7 698 49.3
FAN19G0463 Fragaria x ananassa HOM05D006375 ORTHO05D008188 2.7e-160 569.7 693 49.6
Phvul.008G233100 Phaseolus vulgaris HOM05D006375 ORTHO05D008188 3.0e-159 566.2 695 49.5
AUR62017915 Chenopodium quinoa HOM05D006375 ORTHO05D008188 1.5e-155 553.9 697 48.4
AUR62003604 Chenopodium quinoa HOM05D006375 ORTHO05D008188 1.7e-154 550.4 694 48.0
CARHR196570 Cardamine hirsuta HOM05D006375 ORTHO05D008188 4.9e-154 548.9 690 47.1
Aa31LG11G13020 Aethionema arabicum HOM05D006375 ORTHO05D008188 3.2e-153 546.2 725 46.1
ATR0564G422 Amborella trichopoda HOM05D006375 ORTHO05D008188 6.0e-152 542.0 748 46.3
Cc07_g13460 Coffea canephora HOM05D006375 ORTHO05D008188 6.0e-152 542.0 709 48.0
THA.LOC104827188 Tarenaya hassleriana HOM05D006375 ORTHO05D008188 7.8e-152 541.6 711 45.7
AL6G27600 Arabidopsis lyrata HOM05D006375 ORTHO05D008188 2.3e-151 540.0 690 47.0
Carub.0006s1484 Capsella rubella HOM05D006375 ORTHO05D008188 1.9e-150 537.0 689 46.0
Thhalv10012651m.g Eutrema salsugineum HOM05D006375 ORTHO05D008188 4.7e-149 532.3 693 45.7
CDE05G1980 Ceratophyllum demersum HOM05D006375 ORTHO05D008188 6.2e-149 531.9 715 44.9
AT5G16630 Arabidopsis thaliana HOM05D006375 ORTHO05D008188 5.2e-148 528.9 688 46.5
Sp6g27540 Schrenkiella parvula HOM05D006375 ORTHO05D008188 2.0e-147 526.9 695 45.2
BcaC03g18507 Brassica carinata HOM05D006375 ORTHO05D008188 1.3e-146 524.2 676 46.3
BraA02t05338Z Brassica rapa HOM05D006375 ORTHO05D008188 2.9e-146 523.1 696 45.5
A02p03690 Brassica napus HOM05D006375 ORTHO05D008188 8.3e-146 521.5 696 45.4
C02p08510 Brassica napus HOM05D006375 ORTHO05D008188 1.7e-143 513.8 661 46.6
CAN.G222.25 Capsicum annuum HOM05D006375 ORTHO05D008188 5.1e-143 512.3 755 44.4
HPP92_024778 Vanilla planifolia HOM05D006375 ORTHO05D008188 4.3e-142 509.2 674 47.6
Lsat_1_v5_gn_2_69340 Lactuca sativa HOM05D006375 ORTHO05D008188 3.1e-140 503.1 669 46.0
BolC2t06767H Brassica oleracea HOM05D006375 ORTHO05D000255 1.1e-137 494.6 716 43.6
Os08g0427500 Oryza sativa ssp. japonica HOM05D006375 ORTHO05D008188 8.7e-135 485.0 650 46.0
Zm00001eb041880 Zea mays HOM05D006375 ORTHO05D008188 9.6e-134 481.5 713 42.4
Ah.02g121850 Amaranthus hybridus HOM05D006375 ORTHO05D008188 2.8e-133 479.9 711 44.4
Peaxi162Scf00305g00616 Petunia axillaris HOM05D006375 ORTHO05D008188 4.4e-131 472.6 580 50.2
unitig_899.g14571 Utricularia gibba HOM05D006375 ORTHO05D008188 6.0e-128 462.2 717 42.7
SEGI_37856 Sequoiadendron giganteum HOM05D006375 ORTHO05D008188 3.0e-127 459.9 739 41.3
Phvul.010G024866 Phaseolus vulgaris HOM05D006375 ORTHO05D008188 2.2e-122 443.7 611 46.2
MBI19_g34823_MAGBIO Magnolia biondii HOM05D006375 ORTHO05D008188 7.1e-121 438.7 496 50.4
Eucgr.F02852 Eucalyptus grandis HOM05D006375 ORTHO05D008188 2.4e-108 397.1 556 43.9
SHI25352 Sapria himalayana HOM05D006375 ORTHO05D008188 5.1e-103 379.4 605 42.1
SMO139G0070 Selaginella moellendorffii HOM05D006375 ORTHO05D008188 1.9e-102 377.5 680 37.6
AagrBONN_evm.TU.Sc2ySwM_340.97 Anthoceros agrestis HOM05D006375 ORTHO05D008188 1.3e-101 374.8 757 35.9
SMO157G0011 Selaginella moellendorffii HOM05D006375 ORTHO05D008188 4.8e-101 372.9 691 36.6
Mapoly0069s0010 Marchantia polymorpha HOM05D006375 ORTHO05D008188 1.2e-99 368.2 815 34.7
FAN26G3226 Fragaria x ananassa HOM05D006375 ORTHO05D008188 5.5e-97 359.4 361 53.5
Pp3c22_7360 Physcomitrium patens HOM05D006375 ORTHO05D008188 1.6e-96 357.8 774 35.1
CBR_g3816 Chara braunii HOM05D006375 ORTHO05D008188 9.1e-76 288.9 973 28.4
Ca_22495_v3 Cicer arietinum L. HOM05D006375 ORTHO05D008188 3.0e-63 247.3 399 41.6
Ca_22493_v3 Cicer arietinum L. HOM05D006375 ORTHO05D008188 1.1e-39 169.1 596 28.4
PRCOL_00001710 Prasinoderma coloniale HOM05D006375 ORTHO05D008188 2.4e-36 157.9 397 30.0
Peaxi162Scf00305g00615 Petunia axillaris HOM05D006375 ORTHO05D008188 6.0e-35 153.3 110 64.5
MCO12G035 Micromonas commoda HOM05D006375 ORTHO05D008188 1.1e-31 142.5 404 28.2
Haze_27154 Corylus avellana HOM05D006375 ORTHO05D008188 1.7e-29 135.2 220 38.2
Cre12.g557400 Chlamydomonas reinhardtii HOM05D006375 ORTHO05D008188 1.2e-19 102.4 261 28.4
Cfa025272 Carpinus fangiana HOM05D006375 ORTHO05D008188 1.9e-17 95.1 203 27.6
Cfa024716 Carpinus fangiana HOM05D006375 ORTHO05D008188 1.3e-13 82.4 173 29.5
CAN.G222.26 Capsicum annuum HOM05D006375 ORTHO05D008188 1.1e-12 79.3 52 71.2
SHI25356 Sapria himalayana HOM05D006375 ORTHO05D008188 1.3e-10 72.4 47 76.6
FAN26G2035 Fragaria x ananassa HOM05D006375 ORTHO05D008188 8.7e-10 69.7 47 70.2
SHI25355 Sapria himalayana HOM05D006375 ORTHO05D000014 2.8e-08 64.7 130 34.6


User provided reference genes

Program Settings