Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv25253 Davidia involucrata HOM05D000329 ORTHO05D002813 3.6e-115 418.3 216 100.0
CSS0022676 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D002813 6.4e-48 194.9 176 63.6
GSVIVG01013083001 Vitis vinifera HOM05D000329 ORTHO05D002813 5.8e-41 171.8 191 56.0
Rhsim11G0020600 Rhododendron simsii HOM05D000329 ORTHO05D002813 2.2e-40 169.9 186 57.5
vmacro00286 Vaccinium macrocarpon HOM05D000329 ORTHO05D002813 8.7e-37 157.9 186 54.8
TAR629G2742 Trochodendron aralioides HOM05D000329 ORTHO05D002813 1.5e-36 157.1 191 52.4
MD16G1280000 Malus domestica HOM05D000329 ORTHO05D002813 2.0e-33 146.7 189 48.7
Prupe.5G028800 Prunus persica HOM05D000329 ORTHO05D002813 2.6e-33 146.4 204 46.6
Rhsim07G0131400 Rhododendron simsii HOM05D000329 ORTHO05D002813 7.6e-33 144.8 194 48.5
Lj8A309G34 Lonicera japonica HOM05D000329 ORTHO05D002813 4.9e-32 142.1 189 49.2
TAR636G1802 Trochodendron aralioides HOM05D000329 ORTHO05D002813 2.4e-31 139.8 191 49.7
Actinidia14783 Actinidia chinensis HOM05D000329 ORTHO05D002813 4.2e-31 139.0 210 44.8
Haze_08140 Corylus avellana HOM05D000329 ORTHO05D002813 4.2e-31 139.0 193 48.7
QL12p001398 Quercus lobata HOM05D000329 ORTHO05D002813 9.3e-31 137.9 221 43.9
vmacro14195 Vaccinium macrocarpon HOM05D000329 ORTHO05D002813 3.5e-30 136.0 182 47.8
MD06G1026100 Malus domestica HOM05D000329 ORTHO05D002813 4.6e-30 135.6 192 46.4
CSS0031526 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D002813 7.9e-30 134.8 174 53.4
CSS0041150 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D002813 7.9e-30 134.8 174 53.4
Hma1.2p1_0572F.1_g181280 Hydrangea macrophylla HOM05D000329 ORTHO05D002813 3.0e-29 132.9 195 45.1
Atru.chr6.1514 Acer truncatum HOM05D000329 ORTHO05D002813 1.1e-28 131.0 184 48.4
TAR375G0303 Trochodendron aralioides HOM05D000329 ORTHO05D002813 7.4e-28 128.3 191 47.6
Thecc.03G309300 Theobroma cacao HOM05D000329 ORTHO05D002813 9.6e-28 127.9 189 48.1
Manes.17G009900 Manihot esculenta HOM05D000329 ORTHO05D002813 4.8e-27 125.6 182 48.4
Cpa.g.sc90.3 Carica papaya HOM05D000329 ORTHO05D002813 8.1e-27 124.8 176 49.4
Potri.001G137700 Populus trichocarpa HOM05D000329 ORTHO05D002813 8.1e-27 124.8 185 47.0
CiPaw.11G097900 Carya illinoinensis HOM05D000329 ORTHO05D002813 1.1e-26 124.4 192 44.8
CiPaw.12G067700 Carya illinoinensis HOM05D000329 ORTHO05D002813 1.4e-26 124.0 185 45.9
Duzib205G0915 Durio zibethinus HOM05D000329 ORTHO05D002813 1.2e-25 120.9 189 47.1
Sabra03G0064900 Salix brachista HOM05D000329 ORTHO05D002813 1.5e-25 120.6 181 46.4
Potri.003G096100 Populus trichocarpa HOM05D000329 ORTHO05D002813 2.6e-25 119.8 227 42.7
Nitab4.5_0002778g0080 Nicotiana tabacum HOM05D000329 ORTHO05D002813 9.9e-25 117.9 181 44.8
RcHm_v2.0_Chr7g0211721 Rosa chinensis HOM05D000329 ORTHO05D002813 2.2e-24 116.7 185 45.4
Ciclev10000262m.g Citrus clementina HOM05D000329 ORTHO05D002813 6.4e-24 115.2 193 44.6
Lj2g0019046 Lotus japonicus HOM05D000329 ORTHO05D002813 6.4e-24 115.2 189 41.8
Lj2A232T31 Lonicera japonica HOM05D000329 ORTHO05D002813 8.4e-24 114.8 180 45.6
Nitab4.5_0000556g0190 Nicotiana tabacum HOM05D000329 ORTHO05D002813 1.6e-22 110.5 181 44.2
Duzib084G1263 Durio zibethinus HOM05D000329 ORTHO05D002813 2.3e-21 106.7 188 45.7
Cc08_g03300 Coffea canephora HOM05D000329 ORTHO05D002813 3.0e-21 106.3 219 37.0
Peaxi162Scf00456g00038 Petunia axillaris HOM05D000329 ORTHO05D002813 3.0e-21 106.3 176 43.8
TWI81G0430 Tripterygium wilfordii HOM05D000329 ORTHO05D002813 5.1e-21 105.5 193 41.5
Glyma.09G207400 Glycine max HOM05D000329 ORTHO05D002813 6.7e-21 105.1 193 40.9
Hund14369 Selenicereus undatus HOM05D000329 ORTHO05D002813 8.7e-21 104.8 188 44.1
Nitab4.5_0000411g0080 Nicotiana tabacum HOM05D000329 ORTHO05D002813 1.1e-20 104.4 179 44.7
Sabra01G0106300 Salix brachista HOM05D000329 ORTHO05D002813 1.1e-20 104.4 186 44.1
TWI15G0438 Tripterygium wilfordii HOM05D000329 ORTHO05D002813 1.9e-20 103.6 178 42.1
EL10Ac5g12022 Beta vulgaris HOM05D000329 ORTHO05D002813 5.6e-20 102.1 189 42.9
TWI60G0333 Tripterygium wilfordii HOM05D000329 ORTHO05D002813 1.3e-19 100.9 179 43.0
Nn3g19402 Nelumbo nucifera HOM05D000329 ORTHO05D002813 1.6e-19 100.5 173 43.4
FvH4_5g22980 Fragaria vesca HOM05D000329 ORTHO05D002813 2.1e-19 100.1 219 39.7
Oeu027081.1 Olea europaea HOM05D000329 ORTHO05D002813 2.1e-19 100.1 186 43.0
Duzib068G0601 Durio zibethinus HOM05D000329 ORTHO05D002813 2.8e-19 99.8 188 44.1
FAN13G1113 Fragaria x ananassa HOM05D000329 ORTHO05D002813 2.8e-19 99.8 181 40.9
FAN18G0640 Fragaria x ananassa HOM05D000329 ORTHO05D002813 2.8e-19 99.8 219 39.7
FAN18G1461 Fragaria x ananassa HOM05D000329 ORTHO05D002813 2.8e-19 99.8 219 39.7
DCAR_008228 Daucus carota HOM05D000329 ORTHO05D002813 4.8e-19 99.0 191 38.7
FAN04G0697 Fragaria x ananassa HOM05D000329 ORTHO05D002813 4.8e-19 99.0 181 41.4
Oeu017069.1 Olea europaea HOM05D000329 ORTHO05D002813 8.1e-19 98.2 179 43.6
Medtr5g029370 Medicago truncatula HOM05D000329 ORTHO05D002813 1.1e-18 97.8 218 36.7
TPR.G19433 Trifolium pratense HOM05D000329 ORTHO05D002813 2.4e-18 96.7 216 36.1
Solyc08g076390.3 Solanum lycopersicum HOM05D000329 ORTHO05D002813 3.1e-18 96.3 185 41.6
Gorai.003G185200 Gossypium raimondii HOM05D000329 ORTHO05D002813 4.0e-18 95.9 167 43.1
PSO063G1668 Papaver somniferum HOM05D000329 ORTHO05D002813 4.0e-18 95.9 176 41.5
PGSC0003DMG400014791 Solanum tuberosum HOM05D000329 ORTHO05D002813 5.3e-18 95.5 185 41.6
Peaxi162Scf00045g00226 Petunia axillaris HOM05D000329 ORTHO05D002813 6.9e-18 95.1 183 41.0
VMungo1215G1197 Vigna mungo HOM05D000329 ORTHO05D002813 1.5e-17 94.0 221 37.1
Gohir.A08G154100 Gossypium hirsutum HOM05D000329 ORTHO05D002813 2.0e-17 93.6 189 41.8
Glyma.01G014700 Glycine max HOM05D000329 ORTHO05D002813 2.6e-17 93.2 193 39.9
Nitab4.5_0000834g0020 Nicotiana tabacum HOM05D000329 ORTHO05D002813 2.6e-17 93.2 179 41.9
Sopen08g024970 Solanum pennellii HOM05D000329 ORTHO05D002813 3.4e-17 92.8 185 40.5
Gorai.004G182600 Gossypium raimondii HOM05D000329 ORTHO05D002813 7.6e-17 91.7 190 42.6
PSO782G4222 Papaver somniferum HOM05D000329 ORTHO05D002813 7.6e-17 91.7 178 39.3
PGSC0003DMG400018506 Solanum tuberosum HOM05D000329 ORTHO05D002813 1.7e-16 90.5 176 38.1
Gohir.D08G175000 Gossypium hirsutum HOM05D000329 ORTHO05D002813 2.2e-16 90.1 190 41.6
AUR62018646 Chenopodium quinoa HOM05D000329 ORTHO05D002813 3.8e-16 89.4 196 40.3
FAN08G0451 Fragaria x ananassa HOM05D000329 ORTHO05D002813 3.8e-16 89.4 189 39.2
vmacro00287 Vaccinium macrocarpon HOM05D000329 ORTHO05D002813 3.8e-16 89.4 198 37.4
CAN.G726.18 Capsicum annuum HOM05D000329 ORTHO05D002813 4.9e-16 89.0 179 40.8
Nn1g00196 Nelumbo nucifera HOM05D000329 ORTHO05D002813 4.9e-16 89.0 189 38.1
CsaV3_3G001400 Cucumis sativus L. HOM05D000329 ORTHO05D002813 2.5e-15 86.7 192 37.0
VMungo0251G2744 Vigna mungo HOM05D000329 ORTHO05D002813 2.5e-15 86.7 181 37.0
Phvul.002G137100 Phaseolus vulgaris HOM05D000329 ORTHO05D002813 3.2e-15 86.3 193 40.9
DCAR_004274 Daucus carota HOM05D000329 ORTHO05D002813 4.2e-15 85.9 185 38.9
Psat2g138680 Pisum sativum HOM05D000329 ORTHO05D002813 4.2e-15 85.9 213 34.7
ClCG10G001330 Citrullus lanatus HOM05D000329 ORTHO05D002813 9.3e-15 84.7 215 35.3
arahy.Tifrunner.gnm1.ann1.NP34ZW Arachis hypogaea HOM05D000329 ORTHO05D002813 1.6e-14 84.0 191 34.6
arahy.Tifrunner.gnm1.ann1.NS6D80 Arachis hypogaea HOM05D000329 ORTHO05D002813 1.6e-14 84.0 191 34.6
Ca_25182_v3 Cicer arietinum L. HOM05D000329 ORTHO05D002813 1.6e-14 84.0 213 36.6
CAN.G137.7 Capsicum annuum HOM05D000329 ORTHO05D002813 4.6e-14 82.4 112 48.2
Phvul.003G283100 Phaseolus vulgaris HOM05D000329 ORTHO05D002813 4.6e-14 82.4 187 37.4
AUR62007348 Chenopodium quinoa HOM05D000329 ORTHO05D002813 5.1e-13 79.0 193 34.7
MELO3C013826.2 Cucumis melo HOM05D000329 ORTHO05D002813 5.1e-13 79.0 200 33.5
Gohir.A12G206600 Gossypium hirsutum HOM05D000329 ORTHO05D002813 2.5e-12 76.6 178 41.6
COL.COLO4_16953 Corchorus olitorius HOM05D000329 ORTHO05D002813 3.3e-12 76.3 172 38.4
Lalb_Chr16g0381121 Lupinus albus HOM05D000329 ORTHO05D002813 3.3e-12 76.3 178 34.8
PGR031G2063 Punica granatum HOM05D000329 ORTHO05D002813 4.3e-12 75.9 95 53.7
Sopen08g001270 Solanum pennellii HOM05D000329 ORTHO05D002813 7.4e-12 75.1 106 47.2
Solyc08g005240.3 Solanum lycopersicum HOM05D000329 ORTHO05D002813 1.6e-11 73.9 164 36.6
MBI04_g32197_MAGBIO Magnolia biondii HOM05D000329 ORTHO05D002813 2.1e-11 73.6 195 32.8
Gohir.D12G209000 Gossypium hirsutum HOM05D000329 ORTHO05D002813 2.8e-11 73.2 175 39.4
Gorai.008G224500 Gossypium raimondii HOM05D000329 ORTHO05D002813 2.8e-11 73.2 175 39.4
MSTRG.24844 Avicennia marina HOM05D000329 ORTHO05D002813 3.7e-11 72.8 191 31.9
Aqoxy3G02191 Aquilegia oxysepala HOM05D000329 ORTHO05D002813 8.2e-11 71.6 178 35.4
SalBow6G6602 Salvia bowleyana HOM05D000329 ORTHO05D002813 8.2e-11 71.6 177 36.7
Sed0024692 Sechium edule HOM05D000329 ORTHO05D002813 8.2e-11 71.6 207 31.4
Eucgr.D02224 Eucalyptus grandis HOM05D000329 ORTHO05D002813 1.1e-10 71.2 208 31.2
MSTRG.12168 Avicennia marina HOM05D000329 ORTHO05D002813 1.8e-10 70.5 192 33.9
Migut.E00750 Erythranthe guttata HOM05D000329 ORTHO05D002813 2.4e-10 70.1 109 42.2
ATR0829G040 Amborella trichopoda HOM05D000329 ORTHO05D002813 3.1e-10 69.7 201 29.9
Hund11192 Selenicereus undatus HOM05D000329 ORTHO05D002813 4.1e-10 69.3 185 36.8
Ah.12g055450 Amaranthus hybridus HOM05D000329 ORTHO05D002813 5.3e-10 68.9 178 35.4
HanXRQChr13g0415761 Helianthus annuus HOM05D000329 ORTHO05D002813 9.0e-10 68.2 75 54.7
Sed0016819 Sechium edule HOM05D000329 ORTHO05D002813 1.5e-09 67.4 189 34.4
HanXRQChr03g0083331 Helianthus annuus HOM05D000329 ORTHO05D002813 2.6e-09 66.6 176 31.8
Sc01g0007190 Simmondsia chinensis HOM05D000329 ORTHO05D002813 3.4e-09 66.2 175 32.0
Dinv28998 Davidia involucrata HOM05D000329 ORTHO05D002813 1.3e-08 64.3 69 63.8
ECA240G2154 Erigeron canadensis HOM05D000329 ORTHO05D002813 1.3e-08 64.3 174 34.5
HanXRQChr17g0538141 Helianthus annuus HOM05D000329 ORTHO05D002813 2.9e-08 63.2 174 31.6
Gohir.D03G175900 Gossypium hirsutum HOM05D000329 ORTHO05D002813 5.0e-08 62.4 109 43.1
AT5G46910 Arabidopsis thaliana HOM05D000329 ORTHO05D002813 4.2e-07 59.3 167 34.1
Gohir.A03G000035 Gossypium hirsutum HOM05D000329 ORTHO05D002813 4.2e-07 59.3 109 42.2
AL8G11370 Arabidopsis lyrata HOM05D000329 ORTHO05D002813 7.2e-07 58.5 177 35.0
A09p22670 Brassica napus HOM05D000329 ORTHO05D002813 1.6e-06 57.4 176 33.0
BraA09t37872Z Brassica rapa HOM05D000329 ORTHO05D002813 1.6e-06 57.4 176 33.0
ECA246G0743 Erigeron canadensis HOM05D000329 ORTHO05D002813 3.6e-06 56.2 174 29.3
Eucgr.L02616 Eucalyptus grandis HOM05D000329 ORTHO05D002813 6.1e-06 55.5 103 38.8


User provided reference genes

Program Settings