Gene: PGSC0003DMG400014791

General Information

Structural Information

Species Solanum tuberosum
Gene Identifier PGSC0003DMG400014791
Transcript Identifier PGSC0003DMT400038335
Gene Type Coding gene
Location ST4.03ch08 : 49030839-49036879 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000329
#Genes/#Species 1418/100
Phylogenetic origin

ID ORTHO05D002813
#Genes/#Species 260/97
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

pacid 37470227
id PGSC0003DMG400014791.v4.03
uniprot M1B6N8

Descriptions

Short descriptions
Ortholog descriptions

Description Jumonji domain protein

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0034721	IEA	GOA Database	histone H3-K4 demethylation, trimethyl-H3-K4-specific
GO:0016577	IEA	GOA Database	histone demethylation
GO:0006338	IBA	GOA Database	chromatin remodeling
GO:0045815	ISO	PLAZA Integrative Orthology	positive regulation of gene expression, epigenetic	Os10g0577600
GO:0006355	ISO	PLAZA Integrative Orthology	regulation of transcription, DNA-templated	AT5G46910
GO:0010200	ISO	PLAZA Integrative Orthology	response to chitin	AT5G46910
GO:0048439	ISO	PLAZA Integrative Orthology	flower morphogenesis	Os10g0577600

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0034647	IBA	GOA Database	histone demethylase activity (H3-trimethyl-K4 specific)
GO:0032452	IBA	GOA Database	histone demethylase activity
GO:0032454	ISO	PLAZA Integrative Orthology	histone demethylase activity (H3-K9 specific)	Os10g0577600

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	IBA	GOA Database	nucleus
GO:0000792	ISO	PLAZA Integrative Orthology	heterochromatin	Os10g0577600

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR003347	JmjC domain
IPR004198	Zinc finger, C5HC2-type
IPR003349	JmjN domain

Mapman id	Description
12.3.3.8.5	Chromatin organisation.post-translational histone modification.histone lysine methylation.JmjC group histone demethylase activities.histone demethylase (PKDM8)