Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv17831 Davidia involucrata HOM05D006350 ORTHO05D007850 6.3e-108 394.0 189 100.0
Dinv20017 Davidia involucrata HOM05D006350 ORTHO05D007850 2.1e-95 352.4 189 89.9
CSS0026996 Camellia sinensis var. sinensis HOM05D006350 ORTHO05D007850 1.7e-89 332.8 190 83.7
CSS0007285 Camellia sinensis var. sinensis HOM05D006350 ORTHO05D007850 2.5e-88 328.9 190 83.2
vmacro15831 Vaccinium macrocarpon HOM05D006350 ORTHO05D007850 5.2e-86 321.2 191 82.2
GSVIVG01012630001 Vitis vinifera HOM05D006350 ORTHO05D007850 3.7e-84 315.1 190 80.0
Oeu051224.2 Olea europaea HOM05D006350 ORTHO05D007850 6.3e-84 314.3 189 80.4
Rhsim02G0112000 Rhododendron simsii HOM05D006350 ORTHO05D007850 2.4e-83 312.4 191 79.1
QL05p075148 Quercus lobata HOM05D006350 ORTHO05D007850 3.5e-82 308.5 210 73.8
QL93p0073_0722 Quercus lobata HOM05D006350 ORTHO05D007850 3.5e-82 308.5 210 73.8
Manes.17G035000 Manihot esculenta HOM05D006350 ORTHO05D007850 6.6e-81 304.3 190 80.0
Duzib160G0024 Durio zibethinus HOM05D006350 ORTHO05D007850 8.6e-81 303.9 192 77.6
Thecc.06G214100 Theobroma cacao HOM05D006350 ORTHO05D007850 1.1e-80 303.5 192 78.1
Sopen03g005680 Solanum pennellii HOM05D006350 ORTHO05D007850 1.9e-80 302.8 189 75.1
Ciclev10014587m.g Citrus clementina HOM05D006350 ORTHO05D007850 2.5e-80 302.4 190 77.4
Potri.004G022500 Populus trichocarpa HOM05D006350 ORTHO05D007850 2.5e-80 302.4 190 78.9
CiPaw.09G087000 Carya illinoinensis HOM05D006350 ORTHO05D007850 5.5e-80 301.2 191 77.5
Nitab4.5_0000091g0460 Nicotiana tabacum HOM05D006350 ORTHO05D007850 5.5e-80 301.2 189 74.6
PSO541G3631 Papaver somniferum HOM05D006350 ORTHO05D007850 7.2e-80 300.8 190 76.3
Nn1g03636 Nelumbo nucifera HOM05D006350 ORTHO05D007850 9.5e-80 300.4 192 77.6
Solyc03g031820.4 Solanum lycopersicum HOM05D006350 ORTHO05D007850 1.2e-79 300.1 189 74.6
PGR004G2689 Punica granatum HOM05D006350 ORTHO05D007850 1.6e-79 299.7 191 79.1
Peaxi162Scf00521g00815 Petunia axillaris HOM05D006350 ORTHO05D007850 8.0e-79 297.4 189 74.6
MSTRG.15966 Avicennia marina HOM05D006350 ORTHO05D007850 1.0e-78 297.0 188 76.1
PSO675G5568 Papaver somniferum HOM05D006350 ORTHO05D007850 1.0e-78 297.0 190 75.3
CAN.G404.6 Capsicum annuum HOM05D006350 ORTHO05D007850 3.0e-78 295.4 189 73.0
TAR629G2651 Trochodendron aralioides HOM05D006350 ORTHO05D007850 5.2e-78 294.7 191 75.9
DCAR_008125 Daucus carota HOM05D006350 ORTHO05D007850 6.8e-78 294.3 210 70.5
Prupe.4G026100 Prunus persica HOM05D006350 ORTHO05D007850 6.8e-78 294.3 190 75.8
ECA248G2377 Erigeron canadensis HOM05D006350 ORTHO05D007850 8.9e-78 293.9 190 74.7
MD10G1314700 Malus domestica HOM05D006350 ORTHO05D007850 1.2e-77 293.5 192 75.5
FvH4_3g02650 Fragaria vesca HOM05D006350 ORTHO05D007850 3.4e-77 292.0 190 73.7
Nitab4.5_0002613g0020 Nicotiana tabacum HOM05D006350 ORTHO05D007850 3.4e-77 292.0 195 72.3
Eucgr.D00813 Eucalyptus grandis HOM05D006350 ORTHO05D007850 5.7e-77 291.2 193 76.2
HanXRQChr16g0504561 Helianthus annuus HOM05D006350 ORTHO05D007850 5.7e-77 291.2 191 74.3
RcHm_v2.0_Chr5g0003961 Rosa chinensis HOM05D006350 ORTHO05D007850 1.3e-76 290.0 190 73.7
Aqoxy4G01993 Aquilegia oxysepala HOM05D006350 ORTHO05D007850 2.2e-76 289.3 194 73.2
FAN21G3377 Fragaria x ananassa HOM05D006350 ORTHO05D007850 2.2e-76 289.3 190 73.7
Cc02_g11700 Coffea canephora HOM05D006350 ORTHO05D007850 3.7e-76 288.5 189 75.7
Glyma.04G064300 Glycine max HOM05D006350 ORTHO05D007850 3.7e-76 288.5 194 75.3
Gohir.D10G015200 Gossypium hirsutum HOM05D006350 ORTHO05D007850 8.3e-76 287.3 194 76.3
COL.COLO4_31726 Corchorus olitorius HOM05D006350 ORTHO05D007850 1.1e-75 287.0 192 75.0
Sc05g0008900 Simmondsia chinensis HOM05D006350 ORTHO05D007850 1.4e-75 286.6 190 72.1
Gorai.011G016800 Gossypium raimondii HOM05D006350 ORTHO05D007850 2.4e-75 285.8 194 75.8
EL10Ac8g19892 Beta vulgaris HOM05D006350 ORTHO05D007850 3.1e-75 285.4 191 72.3
Ca_07431_v3 Cicer arietinum L. HOM05D006350 ORTHO05D007850 3.1e-75 285.4 191 72.8
A03p07020 Brassica napus HOM05D006350 ORTHO05D007850 1.6e-74 283.1 191 74.3
Lj1A1225T76 Lonicera japonica HOM05D006350 ORTHO05D007850 2.7e-74 282.3 202 71.8
Lj1g0012123 Lotus japonicus HOM05D006350 ORTHO05D007850 3.5e-74 282.0 192 72.9
Sabra04G0012300 Salix brachista HOM05D006350 ORTHO05D007850 3.5e-74 282.0 227 65.6
C03p08000 Brassica napus HOM05D006350 ORTHO05D007850 5.9e-74 281.2 191 73.3
BolC3t13297H Brassica oleracea HOM05D006350 ORTHO05D007850 5.9e-74 281.2 191 73.3
MBI02_g10104_MAGBIO Magnolia biondii HOM05D006350 ORTHO05D007850 5.9e-74 281.2 192 72.9
Medtr7g050860 Medicago truncatula HOM05D006350 ORTHO05D007850 5.9e-74 281.2 191 70.7
Aa31LG11G14390 Aethionema arabicum HOM05D006350 ORTHO05D007850 7.8e-74 280.8 194 72.2
SGA_v2.0_scaffold114G32022 Striga asiatica HOM05D006350 ORTHO05D007850 7.8e-74 280.8 201 68.7
Gohir.A10G015200 Gossypium hirsutum HOM05D006350 ORTHO05D007850 1.0e-73 280.4 194 73.7
Lalb_Chr09g0319631 Lupinus albus HOM05D006350 ORTHO05D007850 1.3e-73 280.0 192 71.9
BcaB01g05074 Brassica carinata HOM05D006350 ORTHO05D007850 1.7e-73 279.6 191 72.8
THA.LOC104821036 Tarenaya hassleriana HOM05D006350 ORTHO05D007850 1.7e-73 279.6 194 72.7
Sp6g28900 Schrenkiella parvula HOM05D006350 ORTHO05D007850 2.9e-73 278.9 191 73.3
ClCG01G022180 Citrullus lanatus HOM05D006350 ORTHO05D007850 3.8e-73 278.5 190 72.1
TWI63G1388 Tripterygium wilfordii HOM05D006350 ORTHO05D007850 3.8e-73 278.5 191 72.8
CANSAT80G1390 Cannabis sativa HOM05D006350 ORTHO05D007850 6.6e-73 277.7 191 72.3
Thhalv10012972m.g Eutrema salsugineum HOM05D006350 ORTHO05D007850 1.1e-72 276.9 191 72.8
AL6G25990 Arabidopsis lyrata HOM05D006350 ORTHO05D007850 1.5e-72 276.6 191 72.8
CARHR198140 Cardamine hirsuta HOM05D006350 ORTHO05D007850 2.5e-72 275.8 191 71.7
Atru.chr10.2148 Acer truncatum HOM05D006350 ORTHO05D007850 7.3e-72 274.2 166 75.9
Carub.0006s1334 Capsella rubella HOM05D006350 ORTHO05D007850 7.3e-72 274.2 191 72.3
Migut.M01281 Erythranthe guttata HOM05D006350 ORTHO05D007850 9.5e-72 273.9 188 70.2
Phvul.002G048900 Phaseolus vulgaris HOM05D006350 ORTHO05D007850 1.2e-71 273.5 194 72.7
AT5G15170 Arabidopsis thaliana HOM05D006350 ORTHO05D007850 1.6e-71 273.1 191 72.8
arahy.Tifrunner.gnm1.ann1.SC0FBD Arachis hypogaea HOM05D006350 ORTHO05D007850 1.6e-71 273.1 194 72.2
arahy.Tifrunner.gnm1.ann1.QV9JTX Arachis hypogaea HOM05D006350 ORTHO05D007850 3.6e-71 271.9 194 72.2
AUR62012643 Chenopodium quinoa HOM05D006350 ORTHO05D007850 3.6e-71 271.9 190 69.5
CsaV3_6G049260 Cucumis sativus L. HOM05D006350 ORTHO05D007850 2.0e-69 266.2 192 68.8
Zm00001eb323120 Zea mays HOM05D006350 ORTHO05D007850 3.4e-69 265.4 189 66.7
Sed0019871 Sechium edule HOM05D006350 ORTHO05D007850 4.4e-69 265.0 190 68.4
VMungo1215G2459 Vigna mungo HOM05D006350 ORTHO05D007850 4.4e-69 265.0 194 69.6
Os07g0530100 Oryza sativa ssp. japonica HOM05D006350 ORTHO05D007850 9.8e-69 263.8 190 66.8
TPR.G10193 Trifolium pratense HOM05D006350 ORTHO05D007850 9.2e-67 257.3 170 71.2
Hund23514 Selenicereus undatus HOM05D006350 ORTHO05D007850 1.6e-66 256.5 190 68.9
FAN25G1413 Fragaria x ananassa HOM05D006350 ORTHO05D007850 4.3e-64 248.4 190 66.3
SEGI_36047 Sequoiadendron giganteum HOM05D006350 ORTHO05D007850 3.1e-62 242.3 193 61.7
Psat3g152760 Pisum sativum HOM05D006350 ORTHO05D007850 6.8e-62 241.1 140 78.6
CDE05G1739 Ceratophyllum demersum HOM05D006350 ORTHO05D007850 4.9e-60 235.0 160 71.2
Mapoly0129s0047 Marchantia polymorpha HOM05D006350 ORTHO05D007850 8.9e-54 214.2 201 56.2
Hund21368 Selenicereus undatus HOM05D006350 ORTHO05D007850 3.2e-51 205.7 114 83.3
SMO117G0269 Selaginella moellendorffii HOM05D006350 ORTHO05D007850 7.1e-51 204.5 191 55.0
MELO3C007370.2 Cucumis melo HOM05D006350 ORTHO05D007850 9.2e-51 204.1 115 80.9
Haze_08403 Corylus avellana HOM05D006350 ORTHO05D007850 2.1e-50 203.0 114 83.3
ATR0109G008 Amborella trichopoda HOM05D006350 ORTHO05D007850 5.6e-48 194.9 114 76.3
Pp3c10_12100 Physcomitrium patens HOM05D006350 ORTHO05D007850 1.5e-40 170.2 115 67.0
Cpa.g.sc198.9 Carica papaya HOM05D006350 ORTHO05D007850 3.6e-39 165.6 123 69.9
Lsat_1_v5_gn_1_127601 Lactuca sativa HOM05D006350 ORTHO05D000125 6.4e-36 154.8 85 80.0
MBI04_g30799_MAGBIO Magnolia biondii HOM05D006350 ORTHO05D007850 4.2e-35 152.1 182 50.0
Hund21371 Selenicereus undatus HOM05D006350 ORTHO05D007850 4.6e-34 148.7 101 69.3
unitig_748.g7139 Utricularia gibba HOM05D006350 ORTHO05D007850 7.8e-34 147.9 91 72.5
Cre01.g053200 Chlamydomonas reinhardtii HOM05D006350 ORTHO05D007850 9.9e-29 131.0 104 57.7
PGSC0003DMG400024073 Solanum tuberosum HOM05D006350 ORTHO05D007850 6.0e-26 121.7 65 78.5
PRCOL_00001871 Prasinoderma coloniale HOM05D006350 ORTHO05D007850 2.5e-24 116.3 185 37.8
MCO12G349 Micromonas commoda HOM05D006350 ORTHO05D007850 1.5e-21 107.1 202 33.7
HPP92_017615 Vanilla planifolia HOM05D006350 ORTHO05D007850 1.4e-14 84.0 48 77.1
AUR62022012 Chenopodium quinoa HOM05D006350 ORTHO05D007850 5.3e-14 82.0 190 31.1
Pp3c20_13830 Physcomitrium patens HOM05D006350 ORTHO05D007850 1.1e-11 74.3 106 42.5
unitig_748.g7138 Utricularia gibba HOM05D006350 ORTHO05D007850 3.2e-11 72.8 80 48.8
CBR_g28581 Chara braunii HOM05D000019 ORTHO05D000048 1.8e-09 67.0 59 55.9
Cfa024753 Carpinus fangiana HOM05D006350 ORTHO05D007850 1.5e-08 63.9 193 27.5
Nn1g07028 Nelumbo nucifera HOM05D006350 ORTHO05D007850 2.8e-07 59.7 67 49.3
HPP92_017614 Vanilla planifolia HOM05D006350 ORTHO05D007850 4.8e-07 58.9 61 54.1


User provided reference genes

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