Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv05834 Davidia involucrata HOM05D005707 ORTHO05D181672 1.5e-67 259.2 121 100.0
Dinv07863 Davidia involucrata HOM05D005707 ORTHO05D007276 7.0e-20 100.9 130 50.0
Actinidia09778 Actinidia chinensis HOM05D005707 ORTHO05D007276 1.6e-11 73.2 129 39.5
RcHm_v2.0_Chr2g0156491 Rosa chinensis HOM05D005707 ORTHO05D007276 1.6e-11 73.2 130 41.5
PGR142G3494 Punica granatum HOM05D005707 ORTHO05D007276 7.8e-11 70.9 128 39.1
Eucgr.A01050 Eucalyptus grandis HOM05D005707 ORTHO05D007276 1.7e-10 69.7 128 36.7
Haze_03608 Corylus avellana HOM05D005707 ORTHO05D007276 5.1e-10 68.2 130 40.0
vmacro12103 Vaccinium macrocarpon HOM05D005707 ORTHO05D007276 5.1e-10 68.2 130 36.9
Cfa007084 Carpinus fangiana HOM05D005707 ORTHO05D007276 8.6e-10 67.4 130 40.0
Hma1.2p1_1267F.1_g271460 Hydrangea macrophylla HOM05D005707 ORTHO05D007276 8.6e-10 67.4 130 35.4
TWI75G1501 Tripterygium wilfordii HOM05D005707 ORTHO05D007276 1.5e-09 66.6 130 36.2
Manes.13G062700 Manihot esculenta HOM05D005707 ORTHO05D007276 1.9e-09 66.2 130 39.2
TWI18G1214 Tripterygium wilfordii HOM05D005707 ORTHO05D007276 1.9e-09 66.2 130 37.7
MSTRG.14925 Avicennia marina HOM05D005707 ORTHO05D007276 5.6e-09 64.7 128 37.5
FAN02G0692 Fragaria x ananassa HOM05D005707 ORTHO05D007276 7.3e-09 64.3 130 38.5
MD09G1123500 Malus domestica HOM05D005707 ORTHO05D007276 7.3e-09 64.3 130 36.2
CiPaw.07G002400 Carya illinoinensis HOM05D005707 ORTHO05D007276 9.5e-09 63.9 130 38.5
FvH4_6g40910 Fragaria vesca HOM05D005707 ORTHO05D007276 1.6e-08 63.2 130 37.7
FAN14G2372 Fragaria x ananassa HOM05D005707 ORTHO05D007276 1.6e-08 63.2 130 37.7
TAR626G1120 Trochodendron aralioides HOM05D005707 ORTHO05D007276 1.6e-08 63.2 128 35.2
CSS0003308 Camellia sinensis var. sinensis HOM05D005707 ORTHO05D007276 2.1e-08 62.8 146 36.3
CSS0049316 Camellia sinensis var. sinensis HOM05D005707 ORTHO05D007276 2.1e-08 62.8 146 36.3
FAN05G2777 Fragaria x ananassa HOM05D005707 ORTHO05D007276 2.1e-08 62.8 130 36.2
Oeu040469.1 Olea europaea HOM05D005707 ORTHO05D007276 2.8e-08 62.4 130 36.9
CANSAT64G1567 Cannabis sativa HOM05D005707 ORTHO05D007276 3.6e-08 62.0 130 34.6
Rhsim06G0174400 Rhododendron simsii HOM05D005707 ORTHO05D007276 3.6e-08 62.0 131 36.6
Glyma.07G119500 Glycine max HOM05D005707 ORTHO05D007276 8.1e-08 60.8 150 38.0
Ah.15g094340 Amaranthus hybridus HOM05D005707 ORTHO05D007276 1.1e-07 60.5 124 33.9
AUR62001346 Chenopodium quinoa HOM05D005707 ORTHO05D007276 1.8e-07 59.7 125 36.8
EL10Ac7g18165 Beta vulgaris HOM05D005707 ORTHO05D007276 2.3e-07 59.3 124 37.1
Ciclev10018207m.g Citrus clementina HOM05D005707 ORTHO05D007276 3.1e-07 58.9 130 36.2
Migut.M00030 Erythranthe guttata HOM05D005707 ORTHO05D007276 3.1e-07 58.9 129 36.4
FAN09G4573 Fragaria x ananassa HOM05D005707 ORTHO05D007276 3.1e-07 58.9 130 36.9
MD17G1113900 Malus domestica HOM05D005707 ORTHO05D007276 4.0e-07 58.5 130 34.6
AUR62025658 Chenopodium quinoa HOM05D005707 ORTHO05D007276 5.2e-07 58.2 125 34.4
Prupe.3G200600 Prunus persica HOM05D005707 ORTHO05D007276 6.8e-07 57.8 130 35.4
Sopen06g023670 Solanum pennellii HOM05D005707 ORTHO05D007276 8.9e-07 57.4 130 36.2
Thhalv10002393m.g Eutrema salsugineum HOM05D005707 ORTHO05D007276 1.2e-06 57.0 136 34.6
Glyma.03G104400 Glycine max HOM05D005707 ORTHO05D007276 1.2e-06 57.0 150 36.7
Nn6g32392 Nelumbo nucifera HOM05D005707 ORTHO05D007276 1.2e-06 57.0 128 35.2
Potri.014G165400 Populus trichocarpa HOM05D005707 ORTHO05D007276 1.2e-06 57.0 130 33.8
Sp3g23690 Schrenkiella parvula HOM05D005707 ORTHO05D007276 1.2e-06 57.0 127 34.6
SpUn0142_0010 Schrenkiella parvula HOM05D005707 ORTHO05D007276 1.2e-06 57.0 127 34.6
Hund18608 Selenicereus undatus HOM05D005707 ORTHO05D007276 1.5e-06 56.6 126 38.1
Cpa.g.sc211.13 Carica papaya HOM05D005707 ORTHO05D007276 2.0e-06 56.2 129 33.3
Nitab4.5_0000303g0290 Nicotiana tabacum HOM05D005707 ORTHO05D007276 2.0e-06 56.2 130 35.4
Lalb_Chr01g0023301 Lupinus albus HOM05D005707 ORTHO05D007276 2.6e-06 55.8 130 35.4
Manes.12G065301 Manihot esculenta HOM05D005707 ORTHO05D007276 2.6e-06 55.8 130 33.8
Nn1g03246 Nelumbo nucifera HOM05D005707 ORTHO05D007276 2.6e-06 55.8 129 37.2
Gorai.007G166700 Gossypium raimondii HOM05D005707 ORTHO05D007276 3.4e-06 55.5 125 34.4
Thecc.01G191800 Theobroma cacao HOM05D005707 ORTHO05D007276 3.4e-06 55.5 130 33.8
COL.COLO4_09234 Corchorus olitorius HOM05D005707 ORTHO05D007276 4.4e-06 55.1 130 33.8
Sc15g0001000 Simmondsia chinensis HOM05D005707 ORTHO05D007276 4.4e-06 55.1 127 37.0
Solyc06g065170.4 Solanum lycopersicum HOM05D005707 ORTHO05D007276 4.4e-06 55.1 125 32.8
Aa31LG9G17700 Aethionema arabicum HOM05D005707 ORTHO05D007276 7.6e-06 54.3 125 32.0
Lj8A134G73 Lonicera japonica HOM05D005707 ORTHO05D007276 7.6e-06 54.3 131 36.6
Gohir.D11G156360 Gossypium hirsutum HOM05D005707 ORTHO05D007276 9.9e-06 53.9 125 33.6


User provided reference genes

Program Settings