Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_027282 Daucus carota HOM05D006635 ORTHO05D008047 1.0e-177 626.7 328 100.0
Ciclev10005690m.g Citrus clementina HOM05D006635 ORTHO05D008047 4.2e-91 339.0 251 69.3
Prupe.1G031500 Prunus persica HOM05D006635 ORTHO05D008047 6.6e-89 331.6 247 68.4
Ciclev10005689m.g Citrus clementina HOM05D006635 ORTHO05D008047 1.9e-88 330.1 248 68.5
RcHm_v2.0_Chr1g0323991 Rosa chinensis HOM05D006635 ORTHO05D008047 8.1e-87 324.7 247 68.8
Haze_11307 Corylus avellana HOM05D006635 ORTHO05D008047 1.4e-86 323.9 252 65.9
Atru.chr4.2211 Acer truncatum HOM05D006635 ORTHO05D008047 2.4e-86 323.2 248 66.5
GSVIVG01018125001 Vitis vinifera HOM05D006635 ORTHO05D008047 3.1e-86 322.8 247 67.2
MD13G1208000 Malus domestica HOM05D006635 ORTHO05D008047 4.0e-86 322.4 247 66.4
Haze_11310 Corylus avellana HOM05D006635 ORTHO05D008047 5.3e-86 322.0 252 65.5
CANSAT78G1035 Cannabis sativa HOM05D006635 ORTHO05D008047 1.5e-85 320.5 252 65.9
Manes.15G037200 Manihot esculenta HOM05D006635 ORTHO05D008047 1.5e-85 320.5 250 66.4
CiPaw.01G189900 Carya illinoinensis HOM05D006635 ORTHO05D008047 7.6e-85 318.2 251 66.1
Migut.G00439 Erythranthe guttata HOM05D006635 ORTHO05D008047 9.9e-85 317.8 257 65.4
CSS0008878 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 2.2e-84 316.6 257 65.4
Hma1.2p1_0650F.1_g195460 Hydrangea macrophylla HOM05D006635 ORTHO05D008047 2.9e-84 316.2 241 68.0
Ciclev10007171m.g Citrus clementina HOM05D006635 ORTHO05D008047 8.4e-84 314.7 231 71.0
Actinidia08441 Actinidia chinensis HOM05D006635 ORTHO05D008047 1.9e-83 313.5 274 60.9
FvH4_2g07190 Fragaria vesca HOM05D006635 ORTHO05D008047 1.9e-83 313.5 247 66.0
FAN24G3344 Fragaria x ananassa HOM05D006635 ORTHO05D008047 2.4e-83 313.2 247 66.0
Cfa008372 Carpinus fangiana HOM05D003636 ORTHO05D005160 5.5e-83 312.0 248 64.5
Gohir.D10G153800 Gossypium hirsutum HOM05D006635 ORTHO05D008047 7.1e-83 311.6 248 66.5
Gorai.011G171700 Gossypium raimondii HOM05D006635 ORTHO05D008047 7.1e-83 311.6 248 66.5
Cc03_g04920 Coffea canephora HOM05D006635 ORTHO05D008047 1.2e-82 310.8 259 67.2
CAN.G118.6 Capsicum annuum HOM05D006635 ORTHO05D008047 2.1e-82 310.1 239 66.1
Lalb_Chr02g0150381 Lupinus albus HOM05D006635 ORTHO05D008047 4.6e-82 308.9 254 64.2
Nitab4.5_0000302g0050 Nicotiana tabacum HOM05D006635 ORTHO05D008047 6.0e-82 308.5 242 67.8
Gohir.A10G113600 Gossypium hirsutum HOM05D006635 ORTHO05D008047 7.9e-82 308.1 248 66.1
FAN20G2319 Fragaria x ananassa HOM05D006635 ORTHO05D008047 1.0e-81 307.8 247 64.4
Sopen06g018890 Solanum pennellii HOM05D006635 ORTHO05D008047 1.0e-81 307.8 247 64.4
TWI53G1330 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 1.0e-81 307.8 251 64.1
TWI53G1448 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 1.0e-81 307.8 251 64.1
Aqoxy5G00314 Aquilegia oxysepala HOM05D006635 ORTHO05D008047 1.3e-81 307.4 256 61.3
PGSC0003DMG400016282 Solanum tuberosum HOM05D006635 ORTHO05D008047 1.3e-81 307.4 239 66.1
Dinv29905 Davidia involucrata HOM05D006635 ORTHO05D008047 1.8e-81 307.0 253 63.6
Sc19g0003750 Simmondsia chinensis HOM05D006635 ORTHO05D008047 1.8e-81 307.0 259 61.0
Sc19g0005210 Simmondsia chinensis HOM05D006635 ORTHO05D008047 2.3e-81 306.6 259 60.6
Potri.010G075900 Populus trichocarpa HOM05D006635 ORTHO05D008047 3.9e-81 305.8 240 67.5
Sed0017322 Sechium edule HOM05D006635 ORTHO05D008047 5.1e-81 305.4 228 66.2
Cpa.g.sc58.53 Carica papaya HOM05D006635 ORTHO05D008047 6.7e-81 305.1 221 69.7
Lj5g0017333 Lotus japonicus HOM05D006635 ORTHO05D008047 6.7e-81 305.1 247 62.8
Thecc.04G246700 Theobroma cacao HOM05D006635 ORTHO05D008047 3.3e-80 302.8 248 64.9
Solyc06g053770.4 Solanum lycopersicum HOM05D006635 ORTHO05D008047 3.7e-79 299.3 247 63.2
Lj6A657T45 Lonicera japonica HOM05D006635 ORTHO05D008047 4.8e-79 298.9 254 63.0
arahy.Tifrunner.gnm1.ann1.20YP49 Arachis hypogaea HOM05D006635 ORTHO05D008047 1.1e-78 297.7 251 62.2
COL.COLO4_15799 Corchorus olitorius HOM05D006635 ORTHO05D008047 2.4e-78 296.6 236 65.7
Eucgr.H03153 Eucalyptus grandis HOM05D006635 ORTHO05D008047 5.3e-78 295.4 252 63.9
Medtr1g075330 Medicago truncatula HOM05D006635 ORTHO05D008047 5.3e-78 295.4 247 62.3
Ah.13g066120 Amaranthus hybridus HOM05D006635 ORTHO05D008047 6.9e-78 295.0 226 64.6
Carub.0003s2327 Capsella rubella HOM05D006635 ORTHO05D008047 6.9e-78 295.0 241 64.3
HanXRQChr13g0424511 Helianthus annuus HOM05D006635 ORTHO05D008047 1.2e-77 294.3 242 63.2
THA.LOC104808600 Tarenaya hassleriana HOM05D006635 ORTHO05D008047 1.2e-77 294.3 234 65.4
Oeu058885.1 Olea europaea HOM05D006635 ORTHO05D008047 2.0e-77 293.5 272 58.5
vmacro15410 Vaccinium macrocarpon HOM05D006635 ORTHO05D008047 2.0e-77 293.5 303 54.5
Nn1g02620 Nelumbo nucifera HOM05D006635 ORTHO05D008047 2.6e-77 293.1 282 57.1
arahy.Tifrunner.gnm1.ann1.P8HXAC Arachis hypogaea HOM05D006635 ORTHO05D008047 3.4e-77 292.7 251 61.0
ClCG09G015590 Citrullus lanatus HOM05D006635 ORTHO05D008047 4.5e-77 292.4 246 63.0
MELO3C018624.2 Cucumis melo HOM05D006635 ORTHO05D008047 1.0e-76 291.2 239 63.2
AUR62002251 Chenopodium quinoa HOM05D006635 ORTHO05D008047 3.8e-76 289.3 237 62.9
Ca_09839_v3 Cicer arietinum L. HOM05D006635 ORTHO05D008047 3.8e-76 289.3 248 60.9
CsaV3_7G006710 Cucumis sativus L. HOM05D006635 ORTHO05D008047 3.8e-76 289.3 233 63.1
ECA240G1129 Erigeron canadensis HOM05D000856 ORTHO05D002253 3.8e-76 289.3 251 61.4
AL3G37550 Arabidopsis lyrata HOM05D006635 ORTHO05D008047 4.9e-76 288.9 240 63.8
Psat4g107880 Pisum sativum HOM05D006635 ORTHO05D008047 6.5e-76 288.5 250 61.6
FAN27G3431 Fragaria x ananassa HOM05D006635 ORTHO05D008047 3.2e-75 286.2 273 57.9
Sp3g20780 Schrenkiella parvula HOM05D006635 ORTHO05D008047 3.2e-75 286.2 242 62.4
Nitab4.5_0008721g0010 Nicotiana tabacum HOM05D006635 ORTHO05D008047 4.2e-75 285.8 198 71.2
MSTRG.4101 Avicennia marina HOM05D006635 ORTHO05D008047 9.3e-75 284.6 254 60.6
PSO832G2723 Papaver somniferum HOM05D006635 ORTHO05D008047 1.2e-74 284.3 248 61.3
PSO210G4915 Papaver somniferum HOM05D006635 ORTHO05D008047 2.7e-74 283.1 248 61.7
PGR004G0241 Punica granatum HOM05D006635 ORTHO05D008047 7.9e-74 281.6 232 61.2
QL06p015844 Quercus lobata HOM05D006635 ORTHO05D008047 7.9e-74 281.6 343 47.5
AT3G23100 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 1.8e-73 280.4 228 62.7
CARHR099010 Cardamine hirsuta HOM05D006635 ORTHO05D008047 1.9e-72 276.9 238 60.9
Hund11856 Selenicereus undatus HOM05D006635 ORTHO05D008047 5.7e-72 275.4 239 61.5
Glyma.20G205600 Glycine max HOM05D006635 ORTHO05D008047 1.3e-71 274.2 248 58.1
Glyma.10G184800 Glycine max HOM05D006635 ORTHO05D008047 2.1e-71 273.5 245 57.6
EL10Ac3g05891 Beta vulgaris HOM05D006635 ORTHO05D008047 2.8e-71 273.1 259 59.5
BcaB04g20471 Brassica carinata HOM05D006635 ORTHO05D008047 1.1e-70 271.2 194 64.9
Phvul.007G125600 Phaseolus vulgaris HOM05D006635 ORTHO05D008047 2.4e-70 270.0 252 56.0
CDE04G0173 Ceratophyllum demersum HOM05D006635 ORTHO05D008047 3.1e-70 269.6 231 60.2
BcaC09g49245 Brassica carinata HOM05D006635 ORTHO05D008047 5.3e-70 268.9 235 61.3
HPP92_023529 Vanilla planifolia HOM05D006635 ORTHO05D008047 5.3e-70 268.9 231 61.9
VMungo0720G1578 Vigna mungo HOM05D006635 ORTHO05D008047 2.2e-68 263.5 252 55.6
Duzib151G0047 Durio zibethinus HOM05D006635 ORTHO05D008047 1.1e-67 261.2 244 61.1
Os03g0740800 Oryza sativa ssp. japonica HOM05D006635 ORTHO05D008047 1.9e-67 260.4 260 55.0
ATR0824G049 Amborella trichopoda HOM05D006635 ORTHO05D008047 7.2e-67 258.5 226 58.0
A01p31980 Brassica napus HOM05D006635 ORTHO05D008047 7.2e-67 258.5 196 63.8
BraA01t03324Z Brassica rapa HOM05D006635 ORTHO05D008047 7.2e-67 258.5 196 63.8
CSS0031458 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 3.0e-65 253.1 283 53.0
Peaxi162Scf00325g00713 Petunia axillaris HOM05D006635 ORTHO05D008047 1.5e-64 250.8 246 57.3
Aa31LG8G9580 Aethionema arabicum HOM05D006635 ORTHO05D008047 1.8e-62 243.8 222 57.2
Thhalv10022194m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 9.1e-62 241.5 235 54.9
Zm00001eb056730 Zea mays HOM05D006635 ORTHO05D008047 9.1e-62 241.5 255 53.7
BolC1t04048H Brassica oleracea HOM05D006635 ORTHO05D008047 1.5e-61 240.7 176 64.2
Lsat_1_v5_gn_3_122920 Lactuca sativa HOM05D006635 ORTHO05D008047 1.0e-57 228.0 204 61.3
MBI19_g38372_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 8.8e-57 224.9 245 54.7
Sabra10G0032800 Salix brachista HOM05D006635 ORTHO05D008047 1.3e-55 221.1 433 37.2
C01p40990 Brassica napus HOM05D006635 ORTHO05D008047 2.2e-47 193.7 135 63.7
PGR102G1543 Punica granatum HOM05D006635 ORTHO05D008047 3.8e-44 183.0 232 47.8
PGR004G0922 Punica granatum HOM05D006635 ORTHO05D008047 6.1e-42 175.6 159 55.3
Mapoly0014s0074 Marchantia polymorpha HOM05D006635 ORTHO05D008047 2.3e-41 173.7 260 38.5
AUR62015462 Chenopodium quinoa HOM05D006635 ORTHO05D008047 1.4e-33 147.9 157 56.7
PGR083G1020 Punica granatum HOM05D006635 ORTHO05D008047 2.6e-32 143.7 232 40.9
AagrBONN_evm.TU.Sc2ySwM_228.5661 Anthoceros agrestis HOM05D006635 ORTHO05D008047 9.1e-30 135.2 221 36.2
TPR.G27195 Trifolium pratense HOM05D006635 ORTHO05D008047 1.3e-28 131.3 93 62.4
TAR636G2119 Trochodendron aralioides HOM05D006635 ORTHO05D008047 1.7e-28 131.0 98 60.2
Ciclev10029925m.g Citrus clementina HOM05D006635 ORTHO05D008047 2.5e-27 127.1 133 49.6
TAR636G0517 Trochodendron aralioides HOM05D006635 ORTHO05D008047 1.2e-26 124.8 113 67.3
SEGI_11171 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 7.3e-19 99.0 91 50.5
Oeu058884.1 Olea europaea HOM05D001680 ORTHO05D001596 2.1e-18 97.4 108 56.5
Pp3c14_21160 Physcomitrium patens HOM05D006635 ORTHO05D008047 2.8e-18 97.1 226 30.1
AT1G61410 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 1.4e-17 94.7 113 55.8
Pp3c1_38430 Physcomitrium patens HOM05D006635 ORTHO05D008047 3.4e-16 90.1 242 31.8
MBI19_g44428_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 2.2e-15 87.4 131 44.3
CBR_g33918 Chara braunii HOM05D006635 ORTHO05D008047 8.3e-15 85.5 173 36.4
Thhalv10021924m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 4.6e-13 79.7 85 57.6
SEGI_02340 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 3.0e-12 77.0 109 49.5
C01p40960 Brassica napus HOM05D006635 ORTHO05D008047 8.6e-12 75.5 86 53.5
C01p40970 Brassica napus HOM05D006635 ORTHO05D008047 1.4e-09 68.2 53 50.9
Pp3c10_9830 Physcomitrium patens HOM05D000160 ORTHO05D000496 1.8e-09 67.8 155 29.0
unitig_747.g21677 Utricularia gibba HOM05D006635 ORTHO05D008047 2.2e-07 60.8 233 25.8
Pp3c13_7410 Physcomitrium patens HOM05D000160 ORTHO05D000496 9.2e-06 55.5 159 27.7
Pp3c3_5070 Physcomitrium patens HOM05D000160 ORTHO05D000496 9.2e-06 55.5 170 25.3


User provided reference genes

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