Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_023277 Daucus carota HOM05D000159 ORTHO05D038075 3.5e-46 188.0 96 100.0
Hma1.2p1_0078F.1_g040940 Hydrangea macrophylla HOM05D000159 ORTHO05D005826 2.3e-18 95.5 92 51.1
Duzib052G1068 Durio zibethinus HOM05D000159 ORTHO05D005826 1.5e-17 92.8 86 52.3
Oeu029286.1 Olea europaea HOM05D000159 ORTHO05D005826 3.4e-17 91.7 81 58.0
Thecc.04G274300 Theobroma cacao HOM05D000159 ORTHO05D005826 1.7e-16 89.4 87 49.4
GSVIVG01017835001 Vitis vinifera HOM05D000159 ORTHO05D005826 2.2e-16 89.0 89 46.1
Gorai.005G056500 Gossypium raimondii HOM05D000159 ORTHO05D005826 6.4e-16 87.4 90 48.9
Gohir.A02G045200 Gossypium hirsutum HOM05D000159 ORTHO05D005826 8.3e-16 87.0 90 47.8
Oeu010957.1 Olea europaea HOM05D000159 ORTHO05D005826 8.3e-16 87.0 94 51.1
Gohir.D02G051200 Gossypium hirsutum HOM05D000159 ORTHO05D005826 1.1e-15 86.7 90 48.9
Actinidia40205 Actinidia chinensis HOM05D000159 ORTHO05D005826 1.9e-15 85.9 95 47.4
Lj6A666G52 Lonicera japonica HOM05D000159 ORTHO05D005826 1.9e-15 85.9 96 43.8
Cfa015518 Carpinus fangiana HOM05D000159 ORTHO05D005826 2.4e-15 85.5 86 48.8
Actinidia23444 Actinidia chinensis HOM05D000159 ORTHO05D005826 9.2e-15 83.6 96 45.8
Actinidia27633 Actinidia chinensis HOM05D000159 ORTHO05D038075 9.2e-15 83.6 96 45.8
MSTRG.10039 Avicennia marina HOM05D000159 ORTHO05D005826 9.2e-15 83.6 94 45.7
Lsat_1_v5_gn_6_14240 Lactuca sativa HOM05D000159 ORTHO05D005826 9.2e-15 83.6 88 48.9
Sc19g0004810 Simmondsia chinensis HOM05D000159 ORTHO05D005826 1.6e-14 82.8 77 51.9
EL10Ac3g06527 Beta vulgaris HOM05D000159 ORTHO05D005826 6.0e-14 80.9 77 46.8
Dinv38341 Davidia involucrata HOM05D000159 ORTHO05D005826 7.8e-14 80.5 94 42.6
Duzib151G0552 Durio zibethinus HOM05D000159 ORTHO05D005826 7.8e-14 80.5 86 46.5
Cpa.g.sc447.1 Carica papaya HOM05D000159 ORTHO05D005826 1.0e-13 80.1 81 53.1
Hund20628 Selenicereus undatus HOM05D000159 ORTHO05D005826 1.0e-13 80.1 88 45.5
Rhsim04G0214100 Rhododendron simsii HOM05D000159 ORTHO05D005826 3.0e-13 78.6 83 49.4
CiPaw.01G155500 Carya illinoinensis HOM05D000159 ORTHO05D005826 3.9e-13 78.2 77 51.9
Manes.03G189400 Manihot esculenta HOM05D000159 ORTHO05D005826 3.9e-13 78.2 77 46.8
Nn4g26087 Nelumbo nucifera HOM05D000159 ORTHO05D005826 5.1e-13 77.8 88 42.0
AUR62042853 Chenopodium quinoa HOM05D000159 ORTHO05D005826 6.6e-13 77.4 77 49.4
Nitab4.5_0000700g0020 Nicotiana tabacum HOM05D000159 ORTHO05D005826 6.6e-13 77.4 85 45.9
Sopen01g030830 Solanum pennellii HOM05D000159 ORTHO05D005826 6.6e-13 77.4 84 46.4
FvH4_4g16910 Fragaria vesca HOM05D000159 ORTHO05D005826 8.6e-13 77.0 91 46.2
FAN12G1424 Fragaria x ananassa HOM05D000159 ORTHO05D005826 8.6e-13 77.0 91 46.2
FAN12G2984 Fragaria x ananassa HOM05D000159 ORTHO05D005826 8.6e-13 77.0 91 46.2
CSS0008234 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D005826 1.1e-12 76.6 91 45.1
RcHm_v2.0_Chr4g0420491 Rosa chinensis HOM05D000159 ORTHO05D005826 1.1e-12 76.6 91 45.1
FAN17G0055 Fragaria x ananassa HOM05D000159 ORTHO05D005826 1.5e-12 76.3 88 47.7
Nitab4.5_0000059g0380 Nicotiana tabacum HOM05D000159 ORTHO05D005826 1.5e-12 76.3 85 45.9
Sabra10G0013400 Salix brachista HOM05D000159 ORTHO05D005826 1.5e-12 76.3 86 47.7
vmacro08227 Vaccinium macrocarpon HOM05D000159 ORTHO05D005826 1.5e-12 76.3 96 39.6
FAN22G0013 Fragaria x ananassa HOM05D000159 ORTHO05D005826 1.9e-12 75.9 88 47.7
Gorai.011G183800 Gossypium raimondii HOM05D000159 ORTHO05D005826 2.5e-12 75.5 93 39.8
AUR62042654 Chenopodium quinoa HOM05D000159 ORTHO05D005826 3.3e-12 75.1 77 46.8
QL06p006708 Quercus lobata HOM05D000159 ORTHO05D005826 3.3e-12 75.1 77 48.1
FAN07G2410 Fragaria x ananassa HOM05D000159 ORTHO05D005826 4.3e-12 74.7 88 46.6
Gohir.A10G104100 Gossypium hirsutum HOM05D000159 ORTHO05D005826 4.3e-12 74.7 93 39.8
Potri.008G197000 Populus trichocarpa HOM05D000159 ORTHO05D005826 4.3e-12 74.7 80 46.2
Atru.chr4.2720 Acer truncatum HOM05D000159 ORTHO05D005826 5.6e-12 74.3 81 46.9
CAN.G627.7 Capsicum annuum HOM05D000159 ORTHO05D005826 5.6e-12 74.3 85 44.7
SGA_v2.0_scaffold57G20267 Striga asiatica HOM05D000159 ORTHO05D005826 7.3e-12 73.9 86 46.5
Ciclev10004348m.g Citrus clementina HOM05D000159 ORTHO05D005826 9.6e-12 73.6 85 45.9
Eucgr.B01228 Eucalyptus grandis HOM05D000159 ORTHO05D005826 9.6e-12 73.6 81 45.7
SalBow2G1993 Salvia bowleyana HOM05D000159 ORTHO05D005826 9.6e-12 73.6 82 45.1
Solyc01g080670.3 Solanum lycopersicum HOM05D000159 ORTHO05D005826 2.1e-11 72.4 84 44.0
PGSC0003DMG401006284 Solanum tuberosum HOM05D000159 ORTHO05D005826 2.1e-11 72.4 84 46.4
Migut.N00133 Erythranthe guttata HOM05D000159 ORTHO05D005826 2.8e-11 72.0 103 41.7
Manes.15G019100 Manihot esculenta HOM05D000159 ORTHO05D005826 2.8e-11 72.0 73 47.9
SalBow2G0150 Salvia bowleyana HOM05D000159 ORTHO05D005826 2.8e-11 72.0 73 46.6
Glyma.15G099400 Glycine max HOM05D000159 ORTHO05D005826 4.7e-11 71.2 82 42.7
TAR362G1250 Trochodendron aralioides HOM05D000159 ORTHO05D005826 4.7e-11 71.2 92 41.3
CSS0042519 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D005826 6.2e-11 70.9 86 45.3
Cc03_g02580 Coffea canephora HOM05D000159 ORTHO05D005826 6.2e-11 70.9 77 48.1
CiPaw.02G088100 Carya illinoinensis HOM05D000159 ORTHO05D005826 8.1e-11 70.5 85 43.5
CSS0040004 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D005826 1.4e-10 69.7 76 48.7
Nn3g21216 Nelumbo nucifera HOM05D000159 ORTHO05D005826 1.8e-10 69.3 90 40.0
Phvul.006G159700 Phaseolus vulgaris HOM05D000159 ORTHO05D005826 2.4e-10 68.9 78 41.0
Haze_01032 Corylus avellana HOM05D000159 ORTHO05D005826 3.1e-10 68.6 76 42.1
HanXRQChr08g0227251 Helianthus annuus HOM05D000159 ORTHO05D005826 3.1e-10 68.6 77 49.4
Lalb_Chr18g0055831 Lupinus albus HOM05D000159 ORTHO05D005826 3.1e-10 68.6 86 40.7
Prupe.1G144600 Prunus persica HOM05D000159 ORTHO05D005826 3.1e-10 68.6 94 38.3
TWI09G1437 Tripterygium wilfordii HOM05D000159 ORTHO05D005826 3.1e-10 68.6 91 41.8
TWI53G1317 Tripterygium wilfordii HOM05D000159 ORTHO05D005826 3.1e-10 68.6 82 41.5
SalBow5G0421 Salvia bowleyana HOM05D000159 ORTHO05D005826 4.0e-10 68.2 84 44.0
SalBow5G1042 Salvia bowleyana HOM05D000159 ORTHO05D005826 4.0e-10 68.2 84 44.0
PSO170G1191 Papaver somniferum HOM05D000159 ORTHO05D005826 5.2e-10 67.8 76 42.1
Duzib212G0185 Durio zibethinus HOM05D000159 ORTHO05D005826 6.8e-10 67.4 69 44.9
Aqoxy2G03163 Aquilegia oxysepala HOM05D000159 ORTHO05D005826 1.2e-09 66.6 86 41.9
CANSAT78G0585 Cannabis sativa HOM05D000159 ORTHO05D005826 1.2e-09 66.6 90 38.9
VMungo0540G0436 Vigna mungo HOM05D000159 ORTHO05D005826 1.2e-09 66.6 82 39.0
Ah.13g074380 Amaranthus hybridus HOM05D000159 ORTHO05D005826 2.0e-09 65.9 79 38.0
Glyma.13G213400 Glycine max HOM05D000159 ORTHO05D005826 2.6e-09 65.5 86 38.4
MD13G1175800 Malus domestica HOM05D000159 ORTHO05D005826 2.6e-09 65.5 93 35.5
HanXRQChr07g0193871 Helianthus annuus HOM05D000159 ORTHO05D005826 4.4e-09 64.7 84 44.0
Potri.010G026200 Populus trichocarpa HOM05D000159 ORTHO05D005826 4.4e-09 64.7 77 44.2
MD16G1177600 Malus domestica HOM05D000159 ORTHO05D005826 9.9e-09 63.5 90 36.7
PSO302G0006 Papaver somniferum HOM05D000159 ORTHO05D005826 9.9e-09 63.5 76 39.5
arahy.Tifrunner.gnm1.ann1.1D7P49 Arachis hypogaea HOM05D000159 ORTHO05D005826 1.3e-08 63.2 81 40.7
MELO3C006596.2 Cucumis melo HOM05D000159 ORTHO05D005826 1.3e-08 63.2 93 37.6
Sed0022751 Sechium edule HOM05D000159 ORTHO05D005826 1.3e-08 63.2 92 41.3
AL6G30190 Arabidopsis lyrata HOM05D000159 ORTHO05D005826 1.7e-08 62.8 86 41.9
MSTRG.24771 Avicennia marina HOM05D000159 ORTHO05D005826 2.9e-08 62.0 80 43.8
Lalb_Chr20g0118231 Lupinus albus HOM05D000159 ORTHO05D005826 3.8e-08 61.6 86 39.5
Lj6g0005792 Lotus japonicus HOM05D000159 ORTHO05D005826 4.9e-08 61.2 83 39.8
Aa31LG11G10870 Aethionema arabicum HOM05D000159 ORTHO05D005826 6.4e-08 60.8 76 39.5
arahy.Tifrunner.gnm1.ann1.M2TLIU Arachis hypogaea HOM05D000159 ORTHO05D005826 6.4e-08 60.8 81 39.5
Psat1g186440 Pisum sativum HOM05D000159 ORTHO05D005826 8.4e-08 60.5 81 33.3
BcaB08g36641 Brassica carinata HOM05D000159 ORTHO05D005826 1.1e-07 60.1 78 39.7
BcaC04g18642 Brassica carinata HOM05D000159 ORTHO05D005826 1.9e-07 59.3 78 39.7
A10p20800 Brassica napus HOM05D000159 ORTHO05D005826 1.9e-07 59.3 78 39.7
C09p57670 Brassica napus HOM05D000159 ORTHO05D005826 1.9e-07 59.3 78 39.7
BolC9t58634H Brassica oleracea HOM05D000159 ORTHO05D005826 1.9e-07 59.3 78 39.7
Carub.0006s1715 Capsella rubella HOM05D000159 ORTHO05D005826 1.9e-07 59.3 70 42.9
CARHR194170 Cardamine hirsuta HOM05D000159 ORTHO05D005826 3.2e-07 58.5 70 42.9
AT5G18830 Arabidopsis thaliana HOM05D000159 ORTHO05D005826 4.2e-07 58.2 82 40.2
PGR031G0339 Punica granatum HOM05D000159 ORTHO05D005826 4.2e-07 58.2 86 36.0
Ca_30645_v3 Cicer arietinum L. HOM05D000159 ORTHO05D005826 5.4e-07 57.8 86 32.6
CsaV3_3G014040 Cucumis sativus L. HOM05D000159 ORTHO05D005826 7.1e-07 57.4 95 36.8
BcaB05g23345 Brassica carinata HOM05D000159 ORTHO05D005826 9.3e-07 57.0 70 40.0
BraA10t44145Z Brassica rapa HOM05D000159 ORTHO05D005826 9.3e-07 57.0 72 38.9
TPR.G18032 Trifolium pratense HOM05D000159 ORTHO05D005826 1.2e-06 56.6 79 34.2
Medtr2g020620 Medicago truncatula HOM05D000159 ORTHO05D005826 1.6e-06 56.2 79 34.2
Sp6g25540 Schrenkiella parvula HOM05D000159 ORTHO05D005826 6.0e-06 54.3 70 40.0
Thhalv10012721m.g Eutrema salsugineum HOM05D000159 ORTHO05D005826 7.8e-06 53.9 70 38.6


User provided reference genes

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