Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_023276 Daucus carota HOM05D000159 ORTHO05D005826 4.5e-118 427.9 216 100.0
Dinv38341 Davidia involucrata HOM05D000159 ORTHO05D005826 9.6e-36 154.5 192 47.4
CSS0008234 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D005826 1.1e-34 151.0 200 44.0
CSS0042519 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D005826 3.1e-34 149.4 179 48.6
CSS0040004 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D005826 9.0e-34 147.9 179 48.0
Actinidia40205 Actinidia chinensis HOM05D000159 ORTHO05D005826 3.4e-33 146.0 182 47.8
Rhsim04G0214100 Rhododendron simsii HOM05D000159 ORTHO05D005826 2.2e-32 143.3 184 45.1
Lj6A666G52 Lonicera japonica HOM05D000159 ORTHO05D005826 8.4e-32 141.4 187 43.3
Duzib052G1068 Durio zibethinus HOM05D000159 ORTHO05D005826 3.2e-31 139.4 190 43.2
GSVIVG01017835001 Vitis vinifera HOM05D000159 ORTHO05D005826 3.2e-31 139.4 173 44.5
QL06p006708 Quercus lobata HOM05D000159 ORTHO05D005826 2.1e-30 136.7 192 43.8
Duzib212G0185 Durio zibethinus HOM05D000159 ORTHO05D005826 2.7e-30 136.3 192 43.2
vmacro08227 Vaccinium macrocarpon HOM05D000159 ORTHO05D005826 2.7e-30 136.3 185 44.9
Thecc.04G274300 Theobroma cacao HOM05D000159 ORTHO05D005826 7.9e-30 134.8 152 47.4
CiPaw.02G088100 Carya illinoinensis HOM05D000159 ORTHO05D005826 1.0e-29 134.4 192 42.7
CiPaw.01G155500 Carya illinoinensis HOM05D000159 ORTHO05D005826 3.9e-29 132.5 160 46.9
CAN.G627.7 Capsicum annuum HOM05D000159 ORTHO05D005826 1.9e-28 130.2 187 39.6
Nn4g26087 Nelumbo nucifera HOM05D000159 ORTHO05D005826 3.3e-28 129.4 193 38.3
Cc03_g02580 Coffea canephora HOM05D000159 ORTHO05D005826 4.3e-28 129.0 152 45.4
Cfa015518 Carpinus fangiana HOM05D000159 ORTHO05D005826 9.6e-28 127.9 192 41.7
Haze_01032 Corylus avellana HOM05D000159 ORTHO05D005826 1.6e-27 127.1 192 41.1
Oeu029286.1 Olea europaea HOM05D000159 ORTHO05D005826 1.6e-27 127.1 187 44.4
Gohir.D02G051200 Gossypium hirsutum HOM05D000159 ORTHO05D005826 2.1e-27 126.7 151 45.7
Atru.chr4.2720 Acer truncatum HOM05D000159 ORTHO05D005826 2.8e-27 126.3 156 47.4
Gorai.005G056500 Gossypium raimondii HOM05D000159 ORTHO05D005826 4.8e-27 125.6 151 45.7
FAN07G2410 Fragaria x ananassa HOM05D000159 ORTHO05D005826 1.4e-26 124.0 181 42.5
Gohir.A02G045200 Gossypium hirsutum HOM05D000159 ORTHO05D005826 1.4e-26 124.0 155 45.8
MSTRG.10039 Avicennia marina HOM05D000159 ORTHO05D005826 2.4e-26 123.2 192 40.1
Oeu010957.1 Olea europaea HOM05D000159 ORTHO05D005826 2.4e-26 123.2 191 40.8
Cpa.g.sc447.1 Carica papaya HOM05D000159 ORTHO05D005826 3.1e-26 122.9 200 41.0
Gohir.A10G104100 Gossypium hirsutum HOM05D000159 ORTHO05D005826 3.1e-26 122.9 177 39.0
Oeu021615.1 Olea europaea HOM05D000159 ORTHO05D005826 3.1e-26 122.9 187 43.9
Prupe.1G144600 Prunus persica HOM05D000159 ORTHO05D005826 3.1e-26 122.9 150 46.7
FAN12G1424 Fragaria x ananassa HOM05D000159 ORTHO05D005826 4.0e-26 122.5 181 42.0
FAN12G2984 Fragaria x ananassa HOM05D000159 ORTHO05D005826 4.0e-26 122.5 181 41.4
FAN22G0013 Fragaria x ananassa HOM05D000159 ORTHO05D005826 5.3e-26 122.1 196 40.3
Gohir.D10G164500 Gossypium hirsutum HOM05D000159 ORTHO05D005826 5.3e-26 122.1 177 39.0
Gorai.011G183800 Gossypium raimondii HOM05D000159 ORTHO05D005826 5.3e-26 122.1 177 39.0
FvH4_4g16910 Fragaria vesca HOM05D000159 ORTHO05D005826 6.9e-26 121.7 181 42.0
PGSC0003DMG401006284 Solanum tuberosum HOM05D000159 ORTHO05D005826 6.9e-26 121.7 157 44.6
Ciclev10004348m.g Citrus clementina HOM05D000159 ORTHO05D005826 9.0e-26 121.3 154 44.2
FAN17G0055 Fragaria x ananassa HOM05D000159 ORTHO05D005826 9.0e-26 121.3 181 42.5
MD16G1177600 Malus domestica HOM05D000159 ORTHO05D005826 1.2e-25 120.9 156 46.2
TAR362G1250 Trochodendron aralioides HOM05D000159 ORTHO05D005826 1.5e-25 120.6 198 39.4
Solyc01g080670.3 Solanum lycopersicum HOM05D000159 ORTHO05D005826 2.0e-25 120.2 157 44.6
Potri.008G197000 Populus trichocarpa HOM05D000159 ORTHO05D005826 2.6e-25 119.8 159 42.8
MELO3C006596.2 Cucumis melo HOM05D000159 ORTHO05D005826 4.5e-25 119.0 204 38.2
Nitab4.5_0000700g0020 Nicotiana tabacum HOM05D000159 ORTHO05D005826 4.5e-25 119.0 192 39.6
Sopen01g030830 Solanum pennellii HOM05D000159 ORTHO05D005826 4.5e-25 119.0 157 43.9
CANSAT78G0585 Cannabis sativa HOM05D000159 ORTHO05D005826 7.6e-25 118.2 175 41.7
RcHm_v2.0_Chr4g0420491 Rosa chinensis HOM05D000159 ORTHO05D005826 7.6e-25 118.2 179 41.3
Migut.N00133 Erythranthe guttata HOM05D000159 ORTHO05D005826 9.9e-25 117.9 186 39.2
CsaV3_3G014040 Cucumis sativus L. HOM05D000159 ORTHO05D005826 1.7e-24 117.1 191 40.3
Oeu029287.1 Olea europaea HOM05D000159 ORTHO05D005826 1.7e-24 117.1 187 41.2
Nitab4.5_0000059g0380 Nicotiana tabacum HOM05D000159 ORTHO05D005826 2.9e-24 116.3 192 38.5
SalBow5G0421 Salvia bowleyana HOM05D000159 ORTHO05D005826 2.9e-24 116.3 187 38.5
SalBow5G1042 Salvia bowleyana HOM05D000159 ORTHO05D005826 2.9e-24 116.3 187 38.5
Sc19g0004800 Simmondsia chinensis HOM05D000159 ORTHO05D005826 3.8e-24 115.9 161 44.1
Hund20628 Selenicereus undatus HOM05D000159 ORTHO05D005826 4.9e-24 115.5 151 44.4
Aqoxy2G03163 Aquilegia oxysepala HOM05D000159 ORTHO05D005826 6.4e-24 115.2 192 33.9
MD13G1175800 Malus domestica HOM05D000159 ORTHO05D005826 6.4e-24 115.2 156 42.3
Potri.010G026200 Populus trichocarpa HOM05D000159 ORTHO05D005826 8.4e-24 114.8 158 40.5
Sabra08G0163300 Salix brachista HOM05D000159 ORTHO05D005826 8.4e-24 114.8 151 44.4
Sc19g0004810 Simmondsia chinensis HOM05D000159 ORTHO05D005826 8.4e-24 114.8 165 41.2
Manes.15G019100 Manihot esculenta HOM05D000159 ORTHO05D005826 1.1e-23 114.4 192 35.9
TWI09G1437 Tripterygium wilfordii HOM05D000159 ORTHO05D005826 1.1e-23 114.4 193 40.4
Peaxi162Scf00095g00001 Petunia axillaris HOM05D000159 ORTHO05D005826 1.4e-23 114.0 149 47.0
Sabra10G0013400 Salix brachista HOM05D000159 ORTHO05D005826 1.4e-23 114.0 156 39.1
Sed0022751 Sechium edule HOM05D000159 ORTHO05D005826 1.9e-23 113.6 181 40.9
ClCG05G005690 Citrullus lanatus HOM05D000159 ORTHO05D005826 3.2e-23 112.8 199 39.2
Nn3g21216 Nelumbo nucifera HOM05D000159 ORTHO05D005826 3.2e-23 112.8 153 43.1
TWI53G1317 Tripterygium wilfordii HOM05D000159 ORTHO05D005826 4.2e-23 112.5 209 40.2
SGA_v2.0_scaffold57G20267 Striga asiatica HOM05D000159 ORTHO05D005826 9.3e-23 111.3 162 40.7
Ah.13g074380 Amaranthus hybridus HOM05D000159 ORTHO05D005826 2.1e-22 110.2 146 46.6
Hma1.2p1_0078F.1_g040940 Hydrangea macrophylla HOM05D000159 ORTHO05D005826 2.7e-22 109.8 155 43.2
Oeu022242.2 Olea europaea HOM05D000159 ORTHO05D005826 3.5e-22 109.4 177 39.0
PSO302G0006 Papaver somniferum HOM05D000159 ORTHO05D005826 6.0e-22 108.6 156 46.8
PSO170G1191 Papaver somniferum HOM05D000159 ORTHO05D005826 1.0e-21 107.8 156 46.2
Medtr2g020620 Medicago truncatula HOM05D000159 ORTHO05D005826 1.3e-21 107.5 194 37.1
Glyma.15G099400 Glycine max HOM05D000159 ORTHO05D005826 1.8e-21 107.1 157 40.8
ECA233G0539 Erigeron canadensis HOM05D000159 ORTHO05D005826 6.7e-21 105.1 187 32.6
TPR.G18032 Trifolium pratense HOM05D000159 ORTHO05D005826 1.5e-20 104.0 194 34.5
EL10Ac3g06527 Beta vulgaris HOM05D000159 ORTHO05D005826 1.9e-20 103.6 212 36.3
Eucgr.B01228 Eucalyptus grandis HOM05D000159 ORTHO05D005826 1.9e-20 103.6 158 42.4
HanXRQChr08g0227251 Helianthus annuus HOM05D000159 ORTHO05D005826 1.9e-20 103.6 188 33.0
MSTRG.24771 Avicennia marina HOM05D000159 ORTHO05D005826 4.3e-20 102.4 149 40.3
HanXRQChr07g0193871 Helianthus annuus HOM05D000159 ORTHO05D005826 9.6e-20 101.3 160 38.1
PGR031G0339 Punica granatum HOM05D000159 ORTHO05D005826 9.6e-20 101.3 155 41.9
Glyma.13G213400 Glycine max HOM05D000159 ORTHO05D005826 3.7e-19 99.4 154 39.0
arahy.Tifrunner.gnm1.ann1.M2TLIU Arachis hypogaea HOM05D000159 ORTHO05D005826 6.2e-19 98.6 136 39.7
Lj6g0005792 Lotus japonicus HOM05D000159 ORTHO05D005826 6.2e-19 98.6 150 40.7
arahy.Tifrunner.gnm1.ann1.1D7P49 Arachis hypogaea HOM05D000159 ORTHO05D005826 8.1e-19 98.2 136 39.0
SalBow2G0150 Salvia bowleyana HOM05D000159 ORTHO05D005826 1.8e-18 97.1 159 35.8
VMungo0540G0436 Vigna mungo HOM05D000159 ORTHO05D005826 5.3e-18 95.5 156 38.5
CARHR194170 Cardamine hirsuta HOM05D000159 ORTHO05D005826 6.9e-18 95.1 194 37.1
Lalb_Chr18g0055831 Lupinus albus HOM05D000159 ORTHO05D005826 6.9e-18 95.1 146 39.7
Duzib151G0552 Durio zibethinus HOM05D000159 ORTHO05D005826 1.2e-17 94.4 139 41.0
Lsat_1_v5_gn_6_14240 Lactuca sativa HOM05D000159 ORTHO05D005826 1.2e-17 94.4 165 35.2
Aa31LG11G10870 Aethionema arabicum HOM05D000159 ORTHO05D005826 1.5e-17 94.0 166 37.3
Lalb_Chr20g0118231 Lupinus albus HOM05D000159 ORTHO05D005826 2.0e-17 93.6 150 40.0
SalBow2G1993 Salvia bowleyana HOM05D000159 ORTHO05D005826 2.6e-17 93.2 134 41.8
Ca_30645_v3 Cicer arietinum L. HOM05D000159 ORTHO05D005826 5.8e-17 92.0 191 34.6
Phvul.006G159700 Phaseolus vulgaris HOM05D000159 ORTHO05D005826 5.8e-17 92.0 157 37.6
Carub.0006s1715 Capsella rubella HOM05D000159 ORTHO05D005826 7.6e-17 91.7 164 38.4
Lj3C807G14 Lonicera japonica HOM05D000159 ORTHO05D005826 7.6e-17 91.7 190 34.7
AT5G18830 Arabidopsis thaliana HOM05D000159 ORTHO05D005826 1.0e-16 91.3 164 38.4
Psat1g186440 Pisum sativum HOM05D000159 ORTHO05D005826 1.0e-16 91.3 147 40.8
AL6G30190 Arabidopsis lyrata HOM05D000159 ORTHO05D005826 1.7e-16 90.5 144 40.3
BcaC04g18642 Brassica carinata HOM05D000159 ORTHO05D005826 2.2e-16 90.1 192 34.9
BolC9t58634H Brassica oleracea HOM05D000159 ORTHO05D005826 2.2e-16 90.1 192 34.9
THA.LOC104827127 Tarenaya hassleriana HOM05D000159 ORTHO05D005826 2.2e-16 90.1 143 37.8
C09p57670 Brassica napus HOM05D000159 ORTHO05D005826 2.9e-16 89.7 192 34.4
unitig_32.g10788 Utricularia gibba HOM05D000159 ORTHO05D005826 3.8e-16 89.4 146 37.0
THA.LOC104802733 Tarenaya hassleriana HOM05D000159 ORTHO05D005826 6.5e-16 88.6 143 37.8
BcaB08g36641 Brassica carinata HOM05D000159 ORTHO05D005826 1.1e-15 87.8 192 34.4
Sp6g25540 Schrenkiella parvula HOM05D000159 ORTHO05D005826 1.9e-15 87.0 156 37.8
Thhalv10012721m.g Eutrema salsugineum HOM05D000159 ORTHO05D005826 3.2e-15 86.3 157 38.2
BcaB05g23345 Brassica carinata HOM05D000159 ORTHO05D005826 4.2e-15 85.9 158 35.4
AUR62042853 Chenopodium quinoa HOM05D000159 ORTHO05D005826 4.2e-15 85.9 97 50.5
BraA10t44145Z Brassica rapa HOM05D000159 ORTHO05D005826 1.6e-14 84.0 192 32.8
CDE05G0688 Ceratophyllum demersum HOM05D000159 ORTHO05D005826 2.3e-13 80.1 139 36.7
BcaC03g13620 Brassica carinata HOM05D000159 ORTHO05D005826 3.0e-13 79.7 158 36.1
A02p05110 Brassica napus HOM05D000159 ORTHO05D005826 3.0e-13 79.7 158 36.1
C02p10160 Brassica napus HOM05D000159 ORTHO05D005826 3.0e-13 79.7 158 36.1
BolC2t06918H Brassica oleracea HOM05D000159 ORTHO05D005826 3.0e-13 79.7 158 36.1
BraA02t05471Z Brassica rapa HOM05D000159 ORTHO05D005826 3.0e-13 79.7 158 36.1
Os05g0408200 Oryza sativa ssp. japonica HOM05D000159 ORTHO05D005826 3.0e-13 79.7 135 33.3
SEGI_19591 Sequoiadendron giganteum HOM05D000159 ORTHO05D005826 3.0e-13 79.7 157 29.9
A10p20800 Brassica napus HOM05D000159 ORTHO05D005826 5.1e-13 79.0 160 33.8
SHI00343 Sapria himalayana HOM05D000159 ORTHO05D005826 6.7e-13 78.6 126 39.7
AUR62042654 Chenopodium quinoa HOM05D000159 ORTHO05D005826 4.8e-11 72.4 74 52.7
ATR0487G022 Amborella trichopoda HOM05D000159 ORTHO05D005826 1.8e-10 70.5 147 31.3
Actinidia23444 Actinidia chinensis HOM05D000159 ORTHO05D005826 5.5e-07 58.9 56 51.8
Manes.03G189400 Manihot esculenta HOM05D000159 ORTHO05D005826 2.7e-06 56.6 127 34.6


User provided reference genes

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