Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_015080 Daucus carota HOM05D003800 ORTHO05D004549 5.7e-135 484.2 235 100.0
MELO3C010053.2 Cucumis melo HOM05D003800 ORTHO05D004549 1.9e-122 442.6 230 90.4
Eucgr.A01783 Eucalyptus grandis HOM05D003800 ORTHO05D004549 4.3e-122 441.4 235 89.8
ClCG03G010650 Citrullus lanatus HOM05D003800 ORTHO05D004549 5.6e-122 441.0 230 90.4
CsaV3_1G044500 Cucumis sativus L. HOM05D003800 ORTHO05D004549 9.5e-122 440.3 230 90.4
CAN.G694.23 Capsicum annuum HOM05D003800 ORTHO05D004549 1.6e-121 439.5 230 90.4
Migut.F01872 Erythranthe guttata HOM05D003800 ORTHO05D004549 2.1e-121 439.1 232 88.8
Solyc05g055760.3 Solanum lycopersicum HOM05D003800 ORTHO05D004549 4.7e-121 438.0 230 90.0
Sopen05g034170 Solanum pennellii HOM05D003800 ORTHO05D004549 4.7e-121 438.0 230 90.0
Atru.chr12.1779 Acer truncatum HOM05D003800 ORTHO05D004549 8.1e-121 437.2 234 88.9
Nitab4.5_0000971g0070 Nicotiana tabacum HOM05D003800 ORTHO05D004549 8.1e-121 437.2 230 89.6
CAN.G694.24 Capsicum annuum HOM05D003800 ORTHO05D004549 1.4e-120 436.4 230 90.0
Nitab4.5_0003099g0070 Nicotiana tabacum HOM05D003800 ORTHO05D004549 1.8e-120 436.0 230 89.1
Peaxi162Scf00048g00815 Petunia axillaris HOM05D003800 ORTHO05D004549 3.1e-120 435.3 232 87.9
QL08p020626 Quercus lobata HOM05D003800 ORTHO05D004549 3.1e-120 435.3 234 88.0
CSS0026150 Camellia sinensis var. sinensis HOM05D003800 ORTHO05D004549 4.0e-120 434.9 232 87.9
CiPaw.07G080800 Carya illinoinensis HOM05D003800 ORTHO05D004549 4.0e-120 434.9 235 86.8
SGA_v2.0_scaffold340G49303 Striga asiatica HOM05D003800 ORTHO05D004549 4.0e-120 434.9 230 88.7
VMungo1383G1495 Vigna mungo HOM05D003800 ORTHO05D004549 4.0e-120 434.9 234 88.0
PGSC0003DMG400023359 Solanum tuberosum HOM05D003800 ORTHO05D004549 5.2e-120 434.5 228 89.5
MSTRG.329 Avicennia marina HOM05D003800 ORTHO05D004549 6.8e-120 434.1 234 86.8
CiPaw.08G114800 Carya illinoinensis HOM05D003800 ORTHO05D004549 6.8e-120 434.1 235 86.8
Prupe.6G361700 Prunus persica HOM05D003800 ORTHO05D004549 8.9e-120 433.7 235 87.2
TPR.G31802 Trifolium pratense HOM05D003800 ORTHO05D004549 8.9e-120 433.7 232 89.2
Glyma.18G242300 Glycine max HOM05D003800 ORTHO05D004549 1.2e-119 433.3 234 88.5
Dinv10508 Davidia involucrata HOM05D003800 ORTHO05D004549 1.5e-119 433.0 232 87.5
Lalb_Chr06g0168491 Lupinus albus HOM05D003800 ORTHO05D004549 1.5e-119 433.0 234 86.8
MD04G1245100 Malus domestica HOM05D003800 ORTHO05D004549 1.5e-119 433.0 235 86.4
RcHm_v2.0_Chr3g0447851 Rosa chinensis HOM05D003800 ORTHO05D004549 2.0e-119 432.6 235 86.8
Cpa.g.sc1105.3 Carica papaya HOM05D003800 ORTHO05D004549 3.4e-119 431.8 235 86.8
Lj1g0015068 Lotus japonicus HOM05D003800 ORTHO05D004549 3.4e-119 431.8 233 88.0
MD12G1086800 Malus domestica HOM05D003800 ORTHO05D004549 3.4e-119 431.8 235 86.0
Medtr7g080060 Medicago truncatula HOM05D003800 ORTHO05D004549 3.4e-119 431.8 232 88.8
PGR119G0297 Punica granatum HOM05D003800 ORTHO05D004549 3.4e-119 431.8 235 87.2
Dinv29095 Davidia involucrata HOM05D003800 ORTHO05D004549 7.5e-119 430.6 235 86.4
FvH4_6g00470 Fragaria vesca HOM05D003800 ORTHO05D004549 1.3e-118 429.9 235 86.0
FAN05G4594 Fragaria x ananassa HOM05D003800 ORTHO05D004549 1.3e-118 429.9 235 86.0
Actinidia06803 Actinidia chinensis HOM05D003800 ORTHO05D004549 1.7e-118 429.5 234 87.2
FAN09G3800 Fragaria x ananassa HOM05D003800 ORTHO05D004549 1.7e-118 429.5 235 86.0
Glyma.09G250200 Glycine max HOM05D003800 ORTHO05D004549 1.7e-118 429.5 230 88.3
Potri.019G053700 Populus trichocarpa HOM05D003800 ORTHO05D004549 1.7e-118 429.5 235 87.2
Nn7g38203 Nelumbo nucifera HOM05D003800 ORTHO05D004549 2.2e-118 429.1 232 87.5
Sopen04g025300 Solanum pennellii HOM05D003800 ORTHO05D004549 2.2e-118 429.1 230 86.5
PGSC0003DMG400007268 Solanum tuberosum HOM05D003800 ORTHO05D004549 2.2e-118 429.1 230 87.0
Lalb_Chr01g0020421 Lupinus albus HOM05D003800 ORTHO05D004549 3.7e-118 428.3 231 87.4
Oeu023172.1 Olea europaea HOM05D003800 ORTHO05D004549 3.7e-118 428.3 232 86.6
Phvul.008G054025 Phaseolus vulgaris HOM05D003800 ORTHO05D004549 3.7e-118 428.3 233 86.7
Lj1A574T25 Lonicera japonica HOM05D003800 ORTHO05D004549 4.9e-118 427.9 230 87.0
Actinidia38903 Actinidia chinensis HOM05D003800 ORTHO05D004549 6.4e-118 427.6 230 87.4
Ciclev10012312m.g Citrus clementina HOM05D003800 ORTHO05D004549 6.4e-118 427.6 230 88.3
Cc09_g03670 Coffea canephora HOM05D003800 ORTHO05D004549 6.4e-118 427.6 230 86.1
CSS0014154 Camellia sinensis var. sinensis HOM05D003800 ORTHO05D004549 8.3e-118 427.2 228 87.7
Peaxi162Scf00156g00114 Petunia axillaris HOM05D003800 ORTHO05D004549 8.3e-118 427.2 251 82.1
Sc09g0001450 Simmondsia chinensis HOM05D003800 ORTHO05D004549 1.1e-117 426.8 231 86.6
Solyc04g056390.3 Solanum lycopersicum HOM05D003800 ORTHO05D004549 1.1e-117 426.8 230 85.7
GSVIVG01019089001 Vitis vinifera HOM05D003800 ORTHO05D004549 1.1e-117 426.8 227 87.7
Nitab4.5_0001435g0050 Nicotiana tabacum HOM05D003800 ORTHO05D004549 1.4e-117 426.4 230 86.5
Psat3g138120 Pisum sativum HOM05D003800 ORTHO05D004549 1.4e-117 426.4 232 87.9
Thecc.05G194400 Theobroma cacao HOM05D003800 ORTHO05D004549 1.9e-117 426.0 235 86.4
HanXRQChr04g0095031 Helianthus annuus HOM05D003800 ORTHO05D004549 5.4e-117 424.5 232 86.2
CAN.G217.10 Capsicum annuum HOM05D003800 ORTHO05D004549 7.1e-117 424.1 230 86.5
Os07g0546000 Oryza sativa ssp. japonica HOM05D003800 ORTHO05D004549 7.1e-117 424.1 232 85.8
Eucgr.H01393 Eucalyptus grandis HOM05D003800 ORTHO05D004549 9.2e-117 423.7 232 85.8
Cfa006258 Carpinus fangiana HOM05D003800 ORTHO05D004549 1.2e-116 423.3 235 85.1
Lsat_1_v5_gn_2_17540 Lactuca sativa HOM05D003800 ORTHO05D004549 1.2e-116 423.3 232 85.3
vmacro10405 Vaccinium macrocarpon HOM05D003800 ORTHO05D004549 1.6e-116 422.9 230 85.7
Zm00001eb323510 Zea mays HOM05D003800 ORTHO05D004549 1.6e-116 422.9 232 84.5
Actinidia03293 Actinidia chinensis HOM05D003800 ORTHO05D004549 2.1e-116 422.5 234 85.5
Rhsim09G0130100 Rhododendron simsii HOM05D003800 ORTHO05D004549 2.7e-116 422.2 232 85.8
TAR365G0109 Trochodendron aralioides HOM05D003800 ORTHO05D004549 2.7e-116 422.2 236 84.7
Duzib128G1178 Durio zibethinus HOM05D003800 ORTHO05D004549 4.6e-116 421.4 235 84.7
Aqoxy2G04026 Aquilegia oxysepala HOM05D003800 ORTHO05D004549 6.0e-116 421.0 235 83.0
PSO357G0181 Papaver somniferum HOM05D003800 ORTHO05D004549 6.0e-116 421.0 233 85.0
MSTRG.27390 Avicennia marina HOM05D003800 ORTHO05D004549 7.8e-116 420.6 232 83.2
THA.LOC104802955 Tarenaya hassleriana HOM05D003800 ORTHO05D004549 1.0e-115 420.2 233 85.0
TWI75G1224 Tripterygium wilfordii HOM05D003800 ORTHO05D004549 1.0e-115 420.2 235 83.8
PGR031G1622 Punica granatum HOM05D003800 ORTHO05D004549 1.3e-115 419.9 233 84.5
Duzib177G0232 Durio zibethinus HOM05D003800 ORTHO05D004549 1.7e-115 419.5 233 84.5
Manes.12G005500 Manihot esculenta HOM05D003800 ORTHO05D004549 1.7e-115 419.5 233 84.1
MBI07_g36332_MAGBIO Magnolia biondii HOM05D003800 ORTHO05D004549 2.3e-115 419.1 232 83.2
HanXRQChr09g0257801 Helianthus annuus HOM05D003800 ORTHO05D004549 3.0e-115 418.7 228 84.2
A03p33110 Brassica napus HOM05D003800 ORTHO05D004549 5.1e-115 417.9 232 84.5
ClCG11G010680 Citrullus lanatus HOM05D003800 ORTHO05D004549 5.1e-115 417.9 235 82.6
Gohir.A08G225900 Gossypium hirsutum HOM05D003800 ORTHO05D004549 5.1e-115 417.9 233 84.5
Gorai.004G262800 Gossypium raimondii HOM05D003800 ORTHO05D004549 5.1e-115 417.9 233 84.5
TWI18G1194 Tripterygium wilfordii HOM05D003800 ORTHO05D004549 5.1e-115 417.9 235 84.3
C03p40290 Brassica napus HOM05D003800 ORTHO05D004549 8.6e-115 417.2 233 83.3
BolC3t16294H Brassica oleracea HOM05D003800 ORTHO05D004549 8.6e-115 417.2 233 83.3
ECA232G0651 Erigeron canadensis HOM05D003800 ORTHO05D004549 8.6e-115 417.2 233 82.4
AT3G02780 Arabidopsis thaliana HOM05D003800 ORTHO05D004549 1.1e-114 416.8 233 83.7
MSTRG.8210 Avicennia marina HOM05D003800 ORTHO05D004549 1.1e-114 416.8 230 84.8
BraA03t12481Z Brassica rapa HOM05D003800 ORTHO05D004549 1.1e-114 416.8 230 84.8
AL3G12190 Arabidopsis lyrata HOM05D003800 ORTHO05D004549 3.3e-114 415.2 233 83.7
Migut.F02135 Erythranthe guttata HOM05D003800 ORTHO05D004549 4.3e-114 414.8 230 84.3
A05p44340 Brassica napus HOM05D003800 ORTHO05D004549 5.6e-114 414.5 230 84.8
BraA06t23290Z Brassica rapa HOM05D003800 ORTHO05D004549 5.6e-114 414.5 230 84.8
BcaC05g30511 Brassica carinata HOM05D003800 ORTHO05D004549 7.3e-114 414.1 232 84.1
C09p75900 Brassica napus HOM05D003800 ORTHO05D004549 7.3e-114 414.1 232 84.1
BolC5t35067H Brassica oleracea HOM05D003800 ORTHO05D004549 7.3e-114 414.1 232 84.1
Gohir.D08G246300 Gossypium hirsutum HOM05D003800 ORTHO05D004549 9.5e-114 413.7 233 83.7
THA.LOC104820922 Tarenaya hassleriana HOM05D003800 ORTHO05D004549 9.5e-114 413.7 228 85.1
arahy.Tifrunner.gnm1.ann1.BW88YF Arachis hypogaea HOM05D003800 ORTHO05D004549 1.2e-113 413.3 257 79.4
PSO017G2843 Papaver somniferum HOM05D003800 ORTHO05D004549 1.6e-113 412.9 235 82.6
Sp3g01810 Schrenkiella parvula HOM05D003800 ORTHO05D004549 1.6e-113 412.9 233 83.7
BcaC05g30508 Brassica carinata HOM05D003800 ORTHO05D004549 2.1e-113 412.5 230 84.8
CsaV3_2G009720 Cucumis sativus L. HOM05D003800 ORTHO05D004549 2.1e-113 412.5 235 80.9
Manes.13G005300 Manihot esculenta HOM05D003800 ORTHO05D004549 2.1e-113 412.5 235 83.0
Carub.0006s1463 Capsella rubella HOM05D003800 ORTHO05D004549 2.8e-113 412.1 233 82.0
MELO3C008717.2 Cucumis melo HOM05D003800 ORTHO05D004549 2.8e-113 412.1 235 80.4
Carub.0003s0188 Capsella rubella HOM05D003800 ORTHO05D004549 3.6e-113 411.8 233 82.8
Thhalv10020933m.g Eutrema salsugineum HOM05D003800 ORTHO05D004549 3.6e-113 411.8 233 83.3
AL6G27370 Arabidopsis lyrata HOM05D003800 ORTHO05D004549 4.7e-113 411.4 233 82.0
PSO675G7217 Papaver somniferum HOM05D003800 ORTHO05D004549 4.7e-113 411.4 235 82.1
CARHR076790 Cardamine hirsuta HOM05D003800 ORTHO05D004549 1.1e-112 410.2 233 82.4
AT5G16440 Arabidopsis thaliana HOM05D003800 ORTHO05D004549 1.8e-112 409.5 233 80.7
Sed0012073 Sechium edule HOM05D003800 ORTHO05D004549 1.8e-112 409.5 235 82.6
BolC3t13395H Brassica oleracea HOM05D003800 ORTHO05D004549 2.3e-112 409.1 235 82.1
TAR636G3604 Trochodendron aralioides HOM05D003800 ORTHO05D004549 2.3e-112 409.1 227 84.6
AUR62000306 Chenopodium quinoa HOM05D003800 ORTHO05D004549 4.0e-112 408.3 228 82.9
Thhalv10014571m.g Eutrema salsugineum HOM05D003800 ORTHO05D004549 4.0e-112 408.3 233 81.5
EL10Ac4g09961 Beta vulgaris HOM05D003800 ORTHO05D004549 5.2e-112 407.9 228 82.0
C03p08990 Brassica napus HOM05D003800 ORTHO05D004549 6.8e-112 407.5 235 81.7
CARHR196820 Cardamine hirsuta HOM05D003800 ORTHO05D004549 6.8e-112 407.5 228 82.5
AUR62006651 Chenopodium quinoa HOM05D003800 ORTHO05D004549 8.9e-112 407.1 228 82.5
ATR1145G078 Amborella trichopoda HOM05D003800 ORTHO05D004549 1.5e-111 406.4 235 80.0
BcaB04g21400 Brassica carinata HOM05D003800 ORTHO05D004549 1.5e-111 406.4 232 82.3
BraA03t10104Z Brassica rapa HOM05D003800 ORTHO05D004549 1.5e-111 406.4 231 83.1
SGA_v2.0_scaffold62G21505 Striga asiatica HOM05D003800 ORTHO05D004549 3.4e-111 405.2 252 76.2
BNapus_Darmor_BZH_scaffold_99p00290 Brassica napus HOM05D003800 ORTHO05D004549 4.4e-111 404.8 231 81.4
Ah.06g195450 Amaranthus hybridus HOM05D003800 ORTHO05D004549 5.8e-111 404.4 228 80.7
Os05g0413400 Oryza sativa ssp. japonica HOM05D003800 ORTHO05D004549 5.8e-111 404.4 232 79.7
BcaNung04309 Brassica carinata HOM05D003800 ORTHO05D004549 1.7e-110 402.9 230 81.7
BolC1t05871H Brassica oleracea HOM05D003800 ORTHO05D004549 1.7e-110 402.9 230 81.7
Zm00001eb349410 Zea mays HOM05D003800 ORTHO05D004549 2.2e-110 402.5 228 81.1
FAN02G2831 Fragaria x ananassa HOM05D003800 ORTHO05D004549 2.9e-110 402.1 217 86.2
Lsat_1_v5_gn_8_2340 Lactuca sativa HOM05D003800 ORTHO05D004549 2.9e-110 402.1 251 76.5
CDE05G0693 Ceratophyllum demersum HOM05D003800 ORTHO05D004549 4.9e-110 401.4 233 79.0
unitig_26.g8931 Utricularia gibba HOM05D005721 ORTHO05D006758 6.4e-110 401.0 234 77.4
Ah.04g158990 Amaranthus hybridus HOM05D003800 ORTHO05D004549 1.9e-109 399.4 228 79.8
Aa31LG11G13220 Aethionema arabicum HOM05D003800 ORTHO05D004549 2.4e-109 399.1 233 79.0
Sabra19G0062900 Salix brachista HOM05D003800 ORTHO05D004549 9.2e-109 397.1 288 70.1
CDE02G3521 Ceratophyllum demersum HOM05D003800 ORTHO05D004549 6.0e-108 394.4 235 79.1
Aa31LG5G13250 Aethionema arabicum HOM05D003800 ORTHO05D004549 1.3e-107 393.3 229 81.7
A03p07770 Brassica napus HOM05D003800 ORTHO05D004549 3.0e-107 392.1 231 81.4
PSO170G0032 Papaver somniferum HOM05D003800 ORTHO05D004549 5.1e-107 391.3 233 80.7
BraA01t04615Z Brassica rapa HOM05D003800 ORTHO05D004549 1.1e-106 390.2 231 79.2
Nitab4.5_0000083g0120 Nicotiana tabacum HOM05D003800 ORTHO05D004549 1.1e-106 390.2 257 73.9
unitig_61.g26276 Utricularia gibba HOM05D003800 ORTHO05D004549 1.9e-106 389.4 214 82.7
SEGI_07465 Sequoiadendron giganteum HOM05D003800 ORTHO05D004549 3.3e-106 388.7 233 77.7
Pp3c1_33430 Physcomitrium patens HOM05D003800 ORTHO05D004549 1.2e-103 380.2 225 78.7
CDE05G3592 Ceratophyllum demersum HOM05D003800 ORTHO05D004549 4.9e-102 374.8 221 78.3
arahy.Tifrunner.gnm1.ann1.7Y2C76 Arachis hypogaea HOM05D003800 ORTHO05D004549 7.8e-100 367.5 229 78.2
Haze_04560 Corylus avellana HOM05D003800 ORTHO05D004549 3.9e-99 365.2 199 85.9
Mapoly0066s0080 Marchantia polymorpha HOM05D003800 ORTHO05D004549 1.5e-98 363.2 225 75.1
Oeu046895.1 Olea europaea HOM05D003800 ORTHO05D004549 4.3e-98 361.7 193 88.1
AagrBONN_evm.TU.Sc2ySwM_344.2844 Anthoceros agrestis HOM05D003800 ORTHO05D004549 5.6e-98 361.3 230 73.0
ECA238G3407 Erigeron canadensis HOM05D003800 ORTHO05D004549 5.6e-98 361.3 197 86.8
SMO367G0306 Selaginella moellendorffii HOM05D003800 ORTHO05D004549 5.3e-96 354.8 226 74.3
Ca_07990_v3 Cicer arietinum L. HOM05D003800 ORTHO05D004549 5.8e-95 351.3 232 75.0
FAN14G0085 Fragaria x ananassa HOM05D003800 ORTHO05D004549 8.4e-94 347.4 203 81.8
MBI11_g44548_MAGBIO Magnolia biondii HOM05D003800 ORTHO05D004549 1.9e-93 346.3 193 81.9
CBR_g48525 Chara braunii HOM05D003800 ORTHO05D004549 7.9e-92 340.9 220 70.0
BcaB04g19388 Brassica carinata HOM05D003800 ORTHO05D004549 1.7e-91 339.7 231 73.2
Zm00001eb288110 Zea mays HOM05D003800 ORTHO05D004549 5.8e-87 324.7 191 79.1
Lju50C0T2 Lonicera japonica HOM05D003800 ORTHO05D004549 1.7e-78 296.6 163 83.4
Sed0006377 Sechium edule HOM05D003800 ORTHO05D004549 2.3e-75 286.2 145 93.8
Sp6g27750 Schrenkiella parvula HOM05D003800 ORTHO05D004549 5.7e-66 255.0 151 80.8
COL.COLO4_38023 Corchorus olitorius HOM05D003800 ORTHO05D004549 1.4e-64 250.4 131 88.5
PRCOL_00001613 Prasinoderma coloniale HOM05D003800 ORTHO05D004549 2.6e-63 246.1 229 54.6
CBR_g16018 Chara braunii HOM05D000019 ORTHO05D000353 9.4e-53 211.1 220 47.3
MCO12G260 Micromonas commoda HOM05D003800 ORTHO05D004549 9.4e-53 211.1 242 46.3
Haze_26091 Corylus avellana HOM05D003800 ORTHO05D004549 2.1e-44 183.3 227 41.9
BNapus_Darmor_BZH_scaffold_122p00260 Brassica napus HOM05D003800 ORTHO05D004549 6.7e-43 178.3 98 78.6
Cre11.g467544 Chlamydomonas reinhardtii HOM05D003800 ORTHO05D004549 2.8e-41 172.9 244 41.0
HanXRQChr09g0257811 Helianthus annuus HOM05D003800 ORTHO05D004549 3.5e-31 139.4 110 64.5
BNapus_Darmor_BZH_scaffold_122p00270 Brassica napus HOM05D003800 ORTHO05D004549 5.5e-29 132.1 78 82.1
TPR.G14062 Trifolium pratense HOM05D001872 ORTHO05D001859 1.7e-25 120.6 133 54.9
FvH4_6g42310 Fragaria vesca HOM05D003800 ORTHO05D045511 9.5e-21 104.8 85 65.9
FAN14G4609 Fragaria x ananassa HOM05D003800 ORTHO05D045511 9.5e-21 104.8 85 65.9
CDE09G0057 Ceratophyllum demersum HOM05D003800 ORTHO05D004549 2.8e-20 103.2 71 69.0
Nitab4.5_0000195g0040 Nicotiana tabacum HOM05D003800 ORTHO05D004549 3.0e-19 99.8 119 47.1
Eucgr.A01782 Eucalyptus grandis HOM05D007208 ORTHO05D009090 6.8e-19 98.6 59 83.1
Nitab4.5_0000740g0050 Nicotiana tabacum HOM05D003800 ORTHO05D011827 6.8e-19 98.6 84 59.5
PGSC0003DMG400012082 Solanum tuberosum HOM05D003800 ORTHO05D004549 1.3e-09 67.8 37 81.1
Nitab4.5_0007043g0020 Nicotiana tabacum HOM05D013000 ORTHO05D011827 2.4e-08 63.5 67 52.2


User provided reference genes

Program Settings