Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_009084 Daucus carota HOM05D002024 ORTHO05D004352 3.7e-216 754.6 386 100.0
Rhsim03G0051100 Rhododendron simsii HOM05D002024 ORTHO05D004352 5.5e-42 176.0 368 38.9
vmacro07561 Vaccinium macrocarpon HOM05D002024 ORTHO05D004352 5.1e-40 169.5 311 40.2
GSVIVG01029953001 Vitis vinifera HOM05D002024 ORTHO05D004352 5.7e-39 166.0 380 36.3
Cpa.g.sc161.19 Carica papaya HOM05D002024 ORTHO05D004352 2.2e-38 164.1 379 35.6
TAR623G1628 Trochodendron aralioides HOM05D002024 ORTHO05D004352 2.8e-38 163.7 365 34.5
Hma1.2p1_0106F.1_g051130 Hydrangea macrophylla HOM05D002024 ORTHO05D004352 2.4e-37 160.6 337 40.1
arahy.Tifrunner.gnm1.ann1.S92YTY Arachis hypogaea HOM05D002024 ORTHO05D004352 2.0e-36 157.5 281 41.3
Gohir.A11G231400 Gossypium hirsutum HOM05D002024 ORTHO05D004352 1.7e-35 154.5 343 37.3
DCAR_013482 Daucus carota HOM05D002024 ORTHO05D004352 2.2e-35 154.1 451 32.4
Haze_20441 Corylus avellana HOM05D002024 ORTHO05D004352 8.5e-35 152.1 293 40.6
Medtr6g027760 Medicago truncatula HOM05D002024 ORTHO05D004352 1.1e-34 151.8 322 38.2
CSS0030941 Camellia sinensis var. sinensis HOM05D002024 ORTHO05D004352 1.4e-34 151.4 280 38.2
Duzib106G0860 Durio zibethinus HOM05D002024 ORTHO05D004352 1.4e-34 151.4 333 37.2
arahy.Tifrunner.gnm1.ann1.9M8SYH Arachis hypogaea HOM05D002024 ORTHO05D004352 4.2e-34 149.8 280 40.0
Ca_25685_v3 Cicer arietinum L. HOM05D002024 ORTHO05D004352 4.2e-34 149.8 271 38.7
Gorai.007G256900 Gossypium raimondii HOM05D002024 ORTHO05D004352 4.2e-34 149.8 345 37.7
Thecc.05G244100 Theobroma cacao HOM05D002024 ORTHO05D004352 1.6e-33 147.9 247 41.7
CSS0008621 Camellia sinensis var. sinensis HOM05D002024 ORTHO05D004352 2.1e-33 147.5 284 37.7
Gohir.D11G242700 Gossypium hirsutum HOM05D002024 ORTHO05D004352 2.1e-33 147.5 301 39.5
Glyma.17G187400 Glycine max HOM05D002024 ORTHO05D004352 2.7e-33 147.1 275 39.6
Cfa017696 Carpinus fangiana HOM05D002024 ORTHO05D004352 4.7e-33 146.4 310 38.4
Sabra13G0056000 Salix brachista HOM05D002024 ORTHO05D004352 1.0e-32 145.2 260 40.4
Migut.J00772 Erythranthe guttata HOM05D002024 ORTHO05D004352 1.4e-32 144.8 252 42.5
TPR.G29868 Trifolium pratense HOM05D002024 ORTHO05D004352 2.3e-32 144.1 269 41.3
Lj2g0020360 Lotus japonicus HOM05D002024 ORTHO05D004352 6.7e-32 142.5 315 38.1
Phvul.004G073900 Phaseolus vulgaris HOM05D002024 ORTHO05D004352 6.7e-32 142.5 274 39.1
Psat1g090200 Pisum sativum HOM05D002024 ORTHO05D004352 8.8e-32 142.1 274 39.8
RcHm_v2.0_Chr3g0496311 Rosa chinensis HOM05D002024 ORTHO05D004352 1.5e-31 141.4 240 41.2
Potri.013G062800 Populus trichocarpa HOM05D002024 ORTHO05D004352 2.0e-31 141.0 261 41.4
VMungo0464G1034 Vigna mungo HOM05D002024 ORTHO05D004352 3.3e-31 140.2 272 38.2
Duzib128G1716 Durio zibethinus HOM05D002024 ORTHO05D004352 7.4e-31 139.0 265 39.6
FvH4_1g28500 Fragaria vesca HOM05D002024 ORTHO05D004352 7.4e-31 139.0 241 42.3
Lalb_Chr02g0157321 Lupinus albus HOM05D002024 ORTHO05D004352 9.7e-31 138.7 247 39.7
Lalb_Chr06g0174121 Lupinus albus HOM05D002024 ORTHO05D004352 1.3e-30 138.3 245 39.6
Manes.08G154300 Manihot esculenta HOM05D002024 ORTHO05D004352 1.3e-30 138.3 307 38.1
TWI60G0427 Tripterygium wilfordii HOM05D002024 ORTHO05D004352 1.3e-30 138.3 248 41.1
FAN19G0777 Fragaria x ananassa HOM05D002024 ORTHO05D004352 2.8e-30 137.1 241 42.3
Glyma.05G089300 Glycine max HOM05D002024 ORTHO05D004352 2.8e-30 137.1 274 39.4
PGR042G1807 Punica granatum HOM05D002024 ORTHO05D004352 3.7e-30 136.7 295 38.0
Actinidia03934 Actinidia chinensis HOM05D002024 ORTHO05D004352 4.8e-30 136.3 414 32.9
FAN26G3161 Fragaria x ananassa HOM05D002024 ORTHO05D004352 4.8e-30 136.3 241 42.3
Nitab4.5_0000098g0220 Nicotiana tabacum HOM05D002024 ORTHO05D004352 1.1e-29 135.2 295 36.6
QL07p017660 Quercus lobata HOM05D002024 ORTHO05D004352 1.1e-29 135.2 381 34.6
MD14G1006500 Malus domestica HOM05D002024 ORTHO05D004352 1.4e-29 134.8 246 40.7
Duzib177G0567 Durio zibethinus HOM05D002024 ORTHO05D004352 3.1e-29 133.7 346 33.8
Potri.019G038701 Populus trichocarpa HOM05D002024 ORTHO05D004352 3.1e-29 133.7 258 39.1
Nitab4.5_0005685g0010 Nicotiana tabacum HOM05D002024 ORTHO05D004352 4.1e-29 133.3 295 36.6
FAN23G2178 Fragaria x ananassa HOM05D002024 ORTHO05D004352 5.3e-29 132.9 241 41.5
CANSAT78G1633 Cannabis sativa HOM05D002024 ORTHO05D004352 2.6e-28 130.6 288 35.8
MD12G1009000 Malus domestica HOM05D002024 ORTHO05D004352 2.6e-28 130.6 370 33.8
Cc06_g17310 Coffea canephora HOM05D002024 ORTHO05D004352 5.9e-28 129.4 336 34.8
COL.COLO4_28619 Corchorus olitorius HOM05D002024 ORTHO05D004352 7.7e-28 129.0 339 36.3
Peaxi162Scf00905g00018 Petunia axillaris HOM05D002024 ORTHO05D004352 7.7e-28 129.0 288 35.1
Gohir.D13G167000 Gossypium hirsutum HOM05D002024 ORTHO05D004352 3.8e-27 126.7 251 39.8
Eucgr.A02131 Eucalyptus grandis HOM05D002024 ORTHO05D004352 6.5e-27 125.9 255 36.9
SGA_v2.0_scaffold31G12789 Striga asiatica HOM05D002024 ORTHO05D004352 6.5e-27 125.9 259 40.9
Ciclev10018753m.g Citrus clementina HOM05D002024 ORTHO05D004352 8.5e-27 125.6 287 35.9
Gorai.013G195500 Gossypium raimondii HOM05D002024 ORTHO05D004352 3.2e-26 123.6 251 39.4
Sc22g0004540 Simmondsia chinensis HOM05D002024 ORTHO05D004352 3.2e-26 123.6 243 38.7
HanXRQChr14g0453601 Helianthus annuus HOM05D002024 ORTHO05D004352 7.2e-26 122.5 326 33.1
Prupe.7G010800 Prunus persica HOM05D002024 ORTHO05D004352 1.2e-25 121.7 340 32.6
Aqoxy2G00589 Aquilegia oxysepala HOM05D002024 ORTHO05D004352 1.6e-25 121.3 311 33.4
Gohir.A13G164100 Gossypium hirsutum HOM05D002024 ORTHO05D004352 2.1e-25 120.9 251 39.0
ECA238G4379 Erigeron canadensis HOM05D002024 ORTHO05D004352 1.0e-24 118.6 294 34.0
Atru.chr2.1480 Acer truncatum HOM05D002024 ORTHO05D004352 1.8e-24 117.9 295 34.6
ATR0697G132 Amborella trichopoda HOM05D002024 ORTHO05D004352 3.0e-24 117.1 388 31.4
EL10Ac5g11731 Beta vulgaris HOM05D002024 ORTHO05D004352 6.7e-24 115.9 365 31.0
CsaV3_4G012120 Cucumis sativus L. HOM05D002024 ORTHO05D004352 2.0e-23 114.4 282 33.3
MELO3C008822.2 Cucumis melo HOM05D002024 ORTHO05D004352 5.7e-23 112.8 283 33.2
AUR62038435 Chenopodium quinoa HOM05D002024 ORTHO05D004352 1.3e-22 111.7 300 33.7
HanXRQChr07g0197171 Helianthus annuus HOM05D002024 ORTHO05D004352 1.3e-22 111.7 331 29.3
Sp7g06250 Schrenkiella parvula HOM05D002024 ORTHO05D004352 1.7e-22 111.3 339 30.1
PSO384G0657 Papaver somniferum HOM05D002024 ORTHO05D004352 4.8e-22 109.8 311 32.5
PSO339G0006 Papaver somniferum HOM05D002024 ORTHO05D004352 1.1e-21 108.6 313 32.3
AUR62041184 Chenopodium quinoa HOM05D002024 ORTHO05D004352 1.4e-21 108.2 300 33.3
THA.LOC104804880 Tarenaya hassleriana HOM05D002024 ORTHO05D004352 1.8e-21 107.8 273 33.7
Cc00_g10130 Coffea canephora HOM05D002024 ORTHO05D004352 5.3e-21 106.3 275 34.2
unitig_22.g5158 Utricularia gibba HOM05D002024 ORTHO05D004352 1.6e-20 104.8 251 37.8
Thhalv10003636m.g Eutrema salsugineum HOM05D002024 ORTHO05D004352 3.5e-20 103.6 346 30.1
CARHR216730 Cardamine hirsuta HOM05D002024 ORTHO05D004352 4.5e-20 103.2 242 33.5
ClCG04G005460 Citrullus lanatus HOM05D002024 ORTHO05D004352 1.0e-19 102.1 281 33.5
AT5G35910 Arabidopsis thaliana HOM05D002024 ORTHO05D004352 1.7e-19 101.3 259 34.4
BcaB02g08047 Brassica carinata HOM05D002024 ORTHO05D004352 2.2e-19 100.9 344 29.1
C06p17400 Brassica napus HOM05D002024 ORTHO05D004352 2.2e-19 100.9 287 31.0
BolC6t36935H Brassica oleracea HOM05D002024 ORTHO05D004352 2.2e-19 100.9 287 31.0
A05p16460 Brassica napus HOM05D002024 ORTHO05D004352 3.8e-19 100.1 289 30.8
CAN.G809.7 Capsicum annuum HOM05D002024 ORTHO05D004352 1.5e-18 98.2 249 31.7
CSS0014390 Camellia sinensis var. sinensis HOM05D002024 ORTHO05D004352 4.2e-18 96.7 289 32.5
Aa31LG9G18040 Aethionema arabicum HOM05D002024 ORTHO05D004352 5.5e-18 96.3 347 29.1
Lsat_1_v5_gn_2_103580 Lactuca sativa HOM05D002024 ORTHO05D004352 9.4e-18 95.5 268 32.8
Hund15117 Selenicereus undatus HOM05D002024 ORTHO05D004352 9.4e-18 95.5 296 31.4
Zm00001eb047500 Zea mays HOM05D002024 ORTHO05D004352 9.4e-18 95.5 278 33.1
AL7G44760 Arabidopsis lyrata HOM05D002024 ORTHO05D004352 1.2e-17 95.1 350 29.1
Sopen10g008230 Solanum pennellii HOM05D002024 ORTHO05D004352 2.1e-17 94.4 290 31.4
BcaC08g44316 Brassica carinata HOM05D002024 ORTHO05D004352 2.7e-17 94.0 287 30.3
Sed0002714 Sechium edule HOM05D002024 ORTHO05D004352 2.7e-17 94.0 353 30.3
BraA05t20551Z Brassica rapa HOM05D002024 ORTHO05D004352 6.1e-17 92.8 270 29.3
Solyc10g018520.1 Solanum lycopersicum HOM05D002024 ORTHO05D004352 6.1e-17 92.8 290 31.0
PGSC0003DMG400020924 Solanum tuberosum HOM05D002024 ORTHO05D004352 1.0e-16 92.0 291 31.6
Carub.0007s3168 Capsella rubella HOM05D002024 ORTHO05D004352 1.4e-16 91.7 235 32.8
Sed0002639 Sechium edule HOM05D002024 ORTHO05D004352 1.4e-16 91.7 291 30.6
Gorai.013G113400 Gossypium raimondii HOM05D002024 ORTHO05D004352 1.8e-16 91.3 261 33.3
Nn6g32382 Nelumbo nucifera HOM05D002024 ORTHO05D004352 8.8e-16 89.0 306 29.1
Ah.02g115700 Amaranthus hybridus HOM05D002024 ORTHO05D004352 1.5e-15 88.2 323 29.7
CDE10G0566 Ceratophyllum demersum HOM05D002024 ORTHO05D004352 8.3e-14 82.4 279 32.3
MBI05_g12088_MAGBIO Magnolia biondii HOM05D002024 ORTHO05D004352 1.1e-13 82.0 256 33.2
THA.LOC104821442 Tarenaya hassleriana HOM05D002024 ORTHO05D004352 1.8e-13 81.3 280 28.9
CDE10G1351 Ceratophyllum demersum HOM05D002024 ORTHO05D004352 5.0e-11 73.2 275 30.5
Gohir.D13G101300 Gossypium hirsutum HOM05D002024 ORTHO05D004352 1.1e-10 72.0 210 32.9
SGA_v2.0_scaffold112G31637 Striga asiatica HOM05D002024 ORTHO05D004352 1.9e-10 71.2 211 32.2
BcaB02g08049 Brassica carinata HOM05D002024 ORTHO05D004352 2.5e-10 70.9 239 29.3
HPP92_007980 Vanilla planifolia HOM05D002024 ORTHO05D004352 2.0e-07 61.2 208 30.3
Lj1C1068G14 Lonicera japonica HOM05D002024 ORTHO05D004352 1.3e-06 58.5 103 44.7


User provided reference genes

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