Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_005271 Daucus carota HOM05D005824 ORTHO05D007029 0.0e+00 1228.8 659 100.0
CSS0029355 Camellia sinensis var. sinensis HOM05D005824 ORTHO05D007029 2.5e-159 566.6 675 48.6
Dinv24497 Davidia involucrata HOM05D005824 ORTHO05D007029 3.8e-152 542.7 673 47.4
Rhsim11G0099700 Rhododendron simsii HOM05D005824 ORTHO05D007029 2.1e-150 537.0 676 50.6
GSVIVG01031305001 Vitis vinifera HOM05D005824 ORTHO05D007029 6.7e-149 531.9 679 47.6
Lj5A322T66 Lonicera japonica HOM05D005824 ORTHO05D007029 8.8e-149 531.6 664 49.2
Sopen01g044470 Solanum pennellii HOM05D005824 ORTHO05D007029 4.8e-147 525.8 684 47.8
CiPaw.10G020000 Carya illinoinensis HOM05D005824 ORTHO05D007029 6.3e-147 525.4 681 49.2
QL07p026733 Quercus lobata HOM05D005824 ORTHO05D007029 1.6e-145 520.8 679 45.9
Cfa020078 Carpinus fangiana HOM05D005824 ORTHO05D007029 1.1e-143 514.6 680 49.1
Nitab4.5_0009690g0020 Nicotiana tabacum HOM05D005824 ORTHO05D007029 9.4e-143 511.5 683 47.1
Oeu061927.1 Olea europaea HOM05D005824 ORTHO05D007029 9.4e-143 511.5 707 45.4
SalBow7G3942 Salvia bowleyana HOM05D005824 ORTHO05D007029 9.4e-143 511.5 688 45.1
PGSC0003DMG400018251 Solanum tuberosum HOM05D005824 ORTHO05D007029 6.1e-142 508.8 691 46.2
Manes.06G027100 Manihot esculenta HOM05D005824 ORTHO05D007029 6.8e-141 505.4 666 46.5
CAN.G1374.10 Capsicum annuum HOM05D005824 ORTHO05D007029 1.2e-140 504.6 684 47.1
Atru.chr12.1601 Acer truncatum HOM05D005824 ORTHO05D007029 7.5e-140 501.9 711 44.3
Thecc.09G352900 Theobroma cacao HOM05D005824 ORTHO05D007029 1.7e-139 500.7 709 44.0
ECA247G2466 Erigeron canadensis HOM05D005824 ORTHO05D007029 2.2e-139 500.4 667 46.2
Eucgr.B01798 Eucalyptus grandis HOM05D005824 ORTHO05D007029 1.4e-138 497.7 691 45.6
Lalb_Chr02g0154321 Lupinus albus HOM05D005824 ORTHO05D007029 2.4e-138 496.9 729 44.2
MSTRG.15631 Avicennia marina HOM05D005824 ORTHO05D007029 3.1e-138 496.5 683 44.7
Sabra15G0009000 Salix brachista HOM05D005824 ORTHO05D007029 7.0e-138 495.4 746 41.0
Cpa.g.sc48.209 Carica papaya HOM05D005824 ORTHO05D007029 1.6e-137 494.2 681 44.5
VMungo0720G2244 Vigna mungo HOM05D005824 ORTHO05D007029 1.6e-137 494.2 717 44.5
Haze_20113 Corylus avellana HOM05D005824 ORTHO05D007029 2.7e-137 493.4 724 46.5
Lj5g0026124 Lotus japonicus HOM05D005824 ORTHO05D007029 2.7e-137 493.4 727 43.3
Gohir.A03G155800 Gossypium hirsutum HOM05D005824 ORTHO05D007029 5.9e-137 492.3 714 44.1
Lj3g0001001 Lotus japonicus HOM05D005824 ORTHO05D007029 7.7e-137 491.9 722 43.1
Gorai.005G200700 Gossypium raimondii HOM05D005824 ORTHO05D007029 1.0e-136 491.5 727 43.6
arahy.Tifrunner.gnm1.ann1.E5V6X9 Arachis hypogaea HOM05D005824 ORTHO05D007029 1.7e-136 490.7 721 43.0
arahy.Tifrunner.gnm1.ann1.S86EGP Arachis hypogaea HOM05D005824 ORTHO05D007029 5.0e-136 489.2 727 43.1
Migut.B00860 Erythranthe guttata HOM05D005824 ORTHO05D007029 5.0e-136 489.2 674 45.1
Potri.015G010900 Populus trichocarpa HOM05D005824 ORTHO05D007029 1.5e-135 487.6 730 43.3
Glyma.02G192500 Glycine max HOM05D005824 ORTHO05D007029 2.7e-134 483.4 724 43.9
Cc02_g35570 Coffea canephora HOM05D005824 ORTHO05D007029 4.7e-134 482.6 780 41.3
TAR362G0448 Trochodendron aralioides HOM05D005824 ORTHO05D007029 4.0e-133 479.6 673 47.3
TWI38G0226 Tripterygium wilfordii HOM05D005824 ORTHO05D007029 1.5e-132 477.6 669 43.9
TPR.G12910 Trifolium pratense HOM05D005824 ORTHO05D007029 2.6e-132 476.9 721 43.1
Medtr1g055080 Medicago truncatula HOM05D005824 ORTHO05D007029 5.7e-132 475.7 716 43.7
Psat6g118640 Pisum sativum HOM05D005824 ORTHO05D007029 5.7e-132 475.7 730 42.5
Glyma.10G084300 Glycine max HOM05D005824 ORTHO05D007029 7.5e-132 475.3 719 43.4
vmacro01596 Vaccinium macrocarpon HOM05D005824 ORTHO05D007029 7.5e-132 475.3 649 45.1
Ca_11665_v3 Cicer arietinum L. HOM05D005824 ORTHO05D007029 2.4e-130 470.3 698 43.1
Aqoxy2G02580 Aquilegia oxysepala HOM05D005824 ORTHO05D007029 7.0e-130 468.8 686 42.0
SGA_v2.0_scaffold33G13450 Striga asiatica HOM05D005824 ORTHO05D007029 1.6e-129 467.6 711 41.6
TPR.G21237 Trifolium pratense HOM05D005824 ORTHO05D007029 1.6e-129 467.6 730 42.5
Prupe.6G306900 Prunus persica HOM05D005824 ORTHO05D007029 7.7e-129 465.3 727 41.5
CsaV3_4G002430 Cucumis sativus L. HOM05D005824 ORTHO05D007029 1.1e-127 461.5 683 42.9
PSO339G3868 Papaver somniferum HOM05D005824 ORTHO05D007029 1.1e-127 461.5 680 43.5
ClCG07G011770 Citrullus lanatus HOM05D005824 ORTHO05D007029 1.5e-127 461.1 688 42.4
Nn2g14227 Nelumbo nucifera HOM05D005824 ORTHO05D007029 1.9e-127 460.7 674 43.3
MD12G1202100 Malus domestica HOM05D005824 ORTHO05D007029 2.1e-126 457.2 722 41.7
MELO3C017799.2 Cucumis melo HOM05D005824 ORTHO05D007029 6.1e-126 455.7 682 41.6
MBI19_g32704_MAGBIO Magnolia biondii HOM05D005824 ORTHO05D007029 6.1e-126 455.7 737 39.9
COL.COLO4_11087 Corchorus olitorius HOM05D005824 ORTHO05D007029 1.8e-125 454.1 673 42.1
Phvul.007G265900 Phaseolus vulgaris HOM05D005824 ORTHO05D007029 1.8e-125 454.1 726 42.4
Gohir.D02G178900 Gossypium hirsutum HOM05D005824 ORTHO05D007029 5.2e-125 452.6 729 41.7
THA.LOC104821746 Tarenaya hassleriana HOM05D005824 ORTHO05D007029 6.8e-125 452.2 740 40.0
AUR62006798 Chenopodium quinoa HOM05D005824 ORTHO05D007029 8.9e-125 451.8 785 39.5
PSO384G0570 Papaver somniferum HOM05D005824 ORTHO05D007029 1.2e-124 451.4 678 43.1
MD04G1189300 Malus domestica HOM05D005824 ORTHO05D007029 7.5e-124 448.7 718 41.1
Nitab4.5_0000185g0360 Nicotiana tabacum HOM05D005824 ORTHO05D007029 4.9e-123 446.0 683 42.9
Sed0007659 Sechium edule HOM05D005824 ORTHO05D007029 5.4e-122 442.6 687 41.3
PSO017G5895 Papaver somniferum HOM05D005824 ORTHO05D007029 9.2e-122 441.8 673 42.5
Sc09g0002470 Simmondsia chinensis HOM05D005824 ORTHO05D007029 4.5e-121 439.5 734 43.1
CANSAT54G1845 Cannabis sativa HOM05D005824 ORTHO05D007029 5.9e-121 439.1 723 40.0
EL10Ac4g09532 Beta vulgaris HOM05D005824 ORTHO05D007029 7.8e-121 438.7 736 40.8
AUR62000450 Chenopodium quinoa HOM05D005824 ORTHO05D007029 7.8e-121 438.7 793 39.3
PSO063G2449 Papaver somniferum HOM05D005824 ORTHO05D007029 8.6e-120 435.3 675 41.9
Lsat_1_v5_gn_9_78801 Lactuca sativa HOM05D005824 ORTHO05D007029 2.5e-119 433.7 632 47.6
RcHm_v2.0_Chr3g0458051 Rosa chinensis HOM05D005824 ORTHO05D007029 2.5e-119 433.7 729 39.6
Peaxi162Scf00357g00429 Petunia axillaris HOM05D005824 ORTHO05D007029 5.6e-119 432.6 618 45.1
Duzib150G0567 Durio zibethinus HOM05D005824 ORTHO05D007029 2.1e-118 430.6 668 43.3
Hma1.2p1_1243F.1_g269980 Hydrangea macrophylla HOM05D005824 ORTHO05D007029 4.7e-118 429.5 573 46.4
Hund21844 Selenicereus undatus HOM05D005824 ORTHO05D007029 4.7e-118 429.5 813 38.0
Sp2g21220 Schrenkiella parvula HOM05D005824 ORTHO05D007029 1.8e-117 427.6 747 39.2
Carub.0006s2449 Capsella rubella HOM05D005824 ORTHO05D007029 8.9e-117 425.2 736 39.7
Thhalv10003721m.g Eutrema salsugineum HOM05D005824 ORTHO05D007029 2.0e-116 424.1 745 38.8
Aa31LG11G9880 Aethionema arabicum HOM05D005824 ORTHO05D007029 2.6e-116 423.7 730 39.2
Duzib168G0004 Durio zibethinus HOM05D005824 ORTHO05D007029 9.8e-116 421.8 671 40.1
CARHR186810 Cardamine hirsuta HOM05D005824 ORTHO05D007029 2.9e-115 420.2 745 39.7
FAN14G3202 Fragaria x ananassa HOM05D005824 ORTHO05D007029 4.1e-114 416.4 731 38.9
FvH4_6g08180 Fragaria vesca HOM05D005824 ORTHO05D007029 9.2e-114 415.2 731 38.7
FAN09G3961 Fragaria x ananassa HOM05D005824 ORTHO05D007029 1.2e-110 404.8 729 38.3
HanXRQChr12g0362901 Helianthus annuus HOM05D005824 ORTHO05D007029 5.4e-106 389.4 670 40.7
AT5G26760 Arabidopsis thaliana HOM05D005824 ORTHO05D007029 7.1e-106 389.0 766 39.7
unitig_748.g6998 Utricularia gibba HOM05D005824 ORTHO05D000260 2.3e-104 384.0 669 37.2
Ah.10g027060 Amaranthus hybridus HOM05D005824 ORTHO05D007029 1.1e-103 381.7 763 37.1
ATR0693G066 Amborella trichopoda HOM05D005824 ORTHO05D007029 1.6e-102 377.9 669 38.1
AL6G38630 Arabidopsis lyrata HOM05D005824 ORTHO05D007029 1.4e-101 374.8 865 34.0
Ciclev10011677m.g Citrus clementina HOM05D005824 ORTHO05D007029 2.2e-99 367.5 482 46.1
C02p58640 Brassica napus HOM05D005824 ORTHO05D007029 1.6e-97 361.3 824 32.6
FAN05G5613 Fragaria x ananassa HOM05D005824 ORTHO05D007029 1.6e-97 361.3 709 37.1
BraA02t08872Z Brassica rapa HOM05D005824 ORTHO05D007029 1.2e-94 351.7 859 31.8
A02p39030 Brassica napus HOM05D005824 ORTHO05D007029 4.0e-93 346.7 858 31.5
BolC2t11924H Brassica oleracea HOM05D005824 ORTHO05D007029 4.0e-93 346.7 830 33.1
Nitab4.5_0002783g0020 Nicotiana tabacum HOM05D005824 ORTHO05D007029 6.8e-93 345.9 683 37.6
CDE01G0540 Ceratophyllum demersum HOM05D005824 ORTHO05D007029 1.3e-91 341.7 716 35.3
FAN02G4519 Fragaria x ananassa HOM05D005824 ORTHO05D007029 1.4e-90 338.2 705 35.3
Os05g0134300 Oryza sativa ssp. japonica HOM05D005824 ORTHO05D007029 5.1e-88 329.7 725 34.2
PGR083G1123 Punica granatum HOM05D005824 ORTHO05D007029 5.6e-87 326.2 518 43.8
BcaNung06222 Brassica carinata HOM05D005824 ORTHO05D007029 1.4e-82 311.6 824 31.4
C07p41490 Brassica napus HOM05D005824 ORTHO05D007029 1.9e-74 284.6 698 33.8
BolC7t44682H Brassica oleracea HOM05D005824 ORTHO05D007029 3.7e-70 270.4 682 34.0
BcaNung03676 Brassica carinata HOM05D005824 ORTHO05D007029 1.5e-68 265.0 672 32.9
HPP92_021934 Vanilla planifolia HOM05D005824 ORTHO05D007029 9.6e-63 245.7 335 43.9
Zm00001eb354720 Zea mays HOM05D005824 ORTHO05D007029 4.5e-60 236.9 625 33.0
Mapoly0075s0015 Marchantia polymorpha HOM05D005824 ORTHO05D007029 6.5e-59 233.0 741 30.5
Gohir.A08G201701 Gossypium hirsutum HOM05D005824 ORTHO05D007029 2.7e-57 227.6 665 31.7
Pp3c6_10400 Physcomitrium patens HOM05D005824 ORTHO05D007029 5.3e-53 213.4 895 25.5
Actinidia35501 Actinidia chinensis HOM05D005824 ORTHO05D007029 1.2e-52 212.2 662 29.6
SMO203G0090 Selaginella moellendorffii HOM05D005824 ORTHO05D007029 2.0e-52 211.5 662 27.8
Nitab4.5_0000185g0370 Nicotiana tabacum HOM05D005824 ORTHO05D007029 3.0e-48 197.6 292 40.4
SEGI_20129 Sequoiadendron giganteum HOM05D005824 ORTHO05D007029 3.1e-45 187.6 335 38.2
Solyc01g101010.4 Solanum lycopersicum HOM05D005824 ORTHO05D007029 4.5e-44 183.7 261 43.3
A06p36990 Brassica napus HOM05D005824 ORTHO05D007029 1.2e-41 175.6 190 48.4
BraA06t26625Z Brassica rapa HOM05D005824 ORTHO05D007029 1.2e-41 175.6 190 48.4
AagrBONN_evm.TU.Sc2ySwM_117.2728 Anthoceros agrestis HOM05D005824 ORTHO05D007029 1.8e-40 171.8 669 27.2
CBR_g20185 Chara braunii HOM05D005824 ORTHO05D007029 3.8e-35 154.1 387 28.7
Hma1.2p1_1553F.1_g290340 Hydrangea macrophylla HOM05D005824 ORTHO05D007029 1.5e-34 152.1 643 28.3
SGA_v2.0_scaffold438G51629 Striga asiatica HOM05D005824 ORTHO05D007029 4.0e-32 144.1 207 40.1
HPP92_021933 Vanilla planifolia HOM05D005824 ORTHO05D007029 8.0e-25 119.8 206 39.3
Cfa020079 Carpinus fangiana HOM05D005824 ORTHO05D007029 7.0e-21 106.7 82 57.3
Oeu060660.1 Olea europaea HOM05D005824 ORTHO05D007029 6.5e-19 100.1 127 43.3
Zm00001eb056090 Zea mays HOM05D000739 ORTHO05D007029 3.2e-18 97.8 110 46.4
CANSAT54G0922 Cannabis sativa HOM05D005824 ORTHO05D007029 2.1e-17 95.1 152 44.1
Zm00001eb289330 Zea mays HOM05D005824 ORTHO05D007029 3.6e-17 94.4 98 50.0
Dinv30929 Davidia involucrata HOM05D005824 ORTHO05D007029 3.0e-16 91.3 123 44.7
CDE12G0845 Ceratophyllum demersum HOM05D005824 ORTHO05D007029 7.5e-15 86.7 159 35.2
Nitab4.5_0000185g0350 Nicotiana tabacum HOM05D005824 ORTHO05D007029 2.8e-09 68.2 93 41.9
VMungo0251G1262 Vigna mungo HOM05D005824 ORTHO05D007029 1.3e-06 59.3 84 53.6
AUR62009842 Chenopodium quinoa HOM05D003327 ORTHO05D004535 2.2e-06 58.5 165 37.6


User provided reference genes

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