Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_003217 Daucus carota HOM05D003957 ORTHO05D004833 2.4e-234 815.1 390 100.0
Dinv09346 Davidia involucrata HOM05D003957 ORTHO05D004833 1.7e-176 622.9 380 78.4
Cc07_g18910 Coffea canephora HOM05D003957 ORTHO05D004833 2.3e-173 612.5 380 76.8
Peaxi162Scf00953g00417 Petunia axillaris HOM05D003957 ORTHO05D004833 6.8e-173 610.9 380 76.3
CSS0035789 Camellia sinensis var. sinensis HOM05D003957 ORTHO05D004833 9.7e-172 607.1 380 77.4
Nitab4.5_0008353g0020 Nicotiana tabacum HOM05D003957 ORTHO05D004833 8.3e-171 604.0 380 75.3
Actinidia20662 Actinidia chinensis HOM05D003957 ORTHO05D004833 1.1e-170 603.6 380 75.8
Nitab4.5_0002918g0090 Nicotiana tabacum HOM05D003531 ORTHO05D004833 4.1e-170 601.7 380 75.0
Oeu014587.1 Olea europaea HOM05D003957 ORTHO05D004833 3.8e-168 595.1 380 74.7
Cfa010778 Carpinus fangiana HOM05D003957 ORTHO05D004833 4.2e-167 591.7 380 75.0
Thecc.01G409500 Theobroma cacao HOM05D003957 ORTHO05D004833 7.2e-167 590.9 380 74.2
Manes.10G140900 Manihot esculenta HOM05D003957 ORTHO05D004833 1.2e-166 590.1 380 73.2
Ciclev10031578m.g Citrus clementina HOM05D003957 ORTHO05D004833 8.0e-166 587.4 380 73.7
Sopen01g034340 Solanum pennellii HOM05D003957 ORTHO05D004833 1.8e-165 586.3 380 73.9
Cpa.g.sc125.12 Carica papaya HOM05D003957 ORTHO05D004833 2.3e-165 585.9 379 73.6
HanXRQChr01g0016501 Helianthus annuus HOM05D003957 ORTHO05D004833 3.0e-165 585.5 380 72.1
PGSC0003DMG400006795 Solanum tuberosum HOM05D003957 ORTHO05D004833 3.0e-165 585.5 380 74.2
Solyc01g087300.3 Solanum lycopersicum HOM05D003957 ORTHO05D004833 4.0e-165 585.1 380 73.7
Sopen01g034330 Solanum pennellii HOM05D003957 ORTHO05D004833 5.2e-165 584.7 380 73.9
GSVIVG01032128001 Vitis vinifera HOM05D003957 ORTHO05D004833 6.8e-165 584.3 380 73.7
Solyc01g087290.3 Solanum lycopersicum HOM05D003957 ORTHO05D004833 1.5e-164 583.2 380 74.2
Eucgr.J01212 Eucalyptus grandis HOM05D003957 ORTHO05D004833 2.6e-164 582.4 382 72.8
Atru.chr11.2608 Acer truncatum HOM05D003957 ORTHO05D004833 4.4e-164 581.6 378 72.5
Prupe.2G015300 Prunus persica HOM05D003957 ORTHO05D004833 4.4e-164 581.6 375 73.6
MSTRG.20577 Avicennia marina HOM05D003957 ORTHO05D004833 5.7e-164 581.3 380 72.9
ECA248G0218 Erigeron canadensis HOM05D003957 ORTHO05D004833 5.7e-164 581.3 381 72.4
Gohir.D08G164700 Gossypium hirsutum HOM05D003957 ORTHO05D004833 5.7e-164 581.3 380 72.1
ClCG10G012310 Citrullus lanatus HOM05D003957 ORTHO05D004833 2.2e-163 579.3 380 72.6
MELO3C023982.2 Cucumis melo HOM05D003957 ORTHO05D004833 2.2e-163 579.3 380 72.9
Gohir.A08G143700 Gossypium hirsutum HOM05D003957 ORTHO05D004833 2.2e-163 579.3 380 72.1
Rhsim01G0129100 Rhododendron simsii HOM05D003957 ORTHO05D004833 2.2e-163 579.3 380 72.4
Sed0014830 Sechium edule HOM05D003957 ORTHO05D004833 2.8e-163 578.9 384 71.4
CsaV3_3G032090 Cucumis sativus L. HOM05D003957 ORTHO05D004833 6.3e-163 577.8 380 72.6
MD02G1308500 Malus domestica HOM05D003957 ORTHO05D004833 6.3e-163 577.8 375 72.8
Ca_19580_v3 Cicer arietinum L. HOM05D003957 ORTHO05D004833 8.3e-163 577.4 379 72.6
CAN.G219.36 Capsicum annuum HOM05D003957 ORTHO05D004833 1.1e-162 577.0 380 72.6
RcHm_v2.0_Chr1g0316511 Rosa chinensis HOM05D003957 ORTHO05D004833 2.4e-162 575.9 375 73.3
TPR.G3690 Trifolium pratense HOM05D003957 ORTHO05D004833 2.4e-162 575.9 378 73.0
COL.COLO4_04863 Corchorus olitorius HOM05D003957 ORTHO05D004833 3.1e-162 575.5 380 73.7
Lalb_Chr25g0282971 Lupinus albus HOM05D003957 ORTHO05D004833 4.1e-162 575.1 380 70.8
Potri.001G264900 Populus trichocarpa HOM05D003957 ORTHO05D004833 5.4e-162 574.7 382 72.3
arahy.Tifrunner.gnm1.ann1.MG259H Arachis hypogaea HOM05D003957 ORTHO05D004833 1.2e-161 573.5 380 72.1
MD07G1012900 Malus domestica HOM05D003957 ORTHO05D004833 1.2e-161 573.5 375 71.5
Psat5g208720 Pisum sativum HOM05D003957 ORTHO05D004833 1.6e-161 573.2 379 72.6
TWI73G1181 Tripterygium wilfordii HOM05D003957 ORTHO05D004833 1.6e-161 573.2 380 73.2
CANSAT80G0271 Cannabis sativa HOM05D003957 ORTHO05D004833 2.0e-161 572.8 388 69.8
SGA_v2.0_scaffold119G32740 Striga asiatica HOM05D003957 ORTHO05D004833 2.7e-161 572.4 380 71.8
FvH4_7g01180 Fragaria vesca HOM05D003957 ORTHO05D004833 4.5e-161 571.6 375 73.1
SalBow5G3453 Salvia bowleyana HOM05D003957 ORTHO05D004833 7.7e-161 570.9 380 70.8
Lj3g0013934 Lotus japonicus HOM05D003957 ORTHO05D004833 1.0e-160 570.5 374 73.3
SalBow5G1725 Salvia bowleyana HOM05D003957 ORTHO05D004833 1.3e-160 570.1 380 70.8
arahy.Tifrunner.gnm1.ann1.N7MVRX Arachis hypogaea HOM05D003957 ORTHO05D004833 6.6e-160 567.8 380 70.8
CAN.G219.37 Capsicum annuum HOM05D003957 ORTHO05D004833 8.6e-160 567.4 356 75.6
PGR044G1355 Punica granatum HOM05D003957 ORTHO05D004833 8.6e-160 567.4 381 71.9
arahy.Tifrunner.gnm1.ann1.X54W53 Arachis hypogaea HOM05D003957 ORTHO05D004833 1.9e-159 566.2 380 71.8
THA.LOC104809852 Tarenaya hassleriana HOM05D003957 ORTHO05D004833 1.9e-159 566.2 374 70.9
TWI09G1258 Tripterygium wilfordii HOM05D003957 ORTHO05D004833 7.2e-159 564.3 380 71.8
CiPaw.14G000800 Carya illinoinensis HOM05D003957 ORTHO05D004833 9.5e-159 563.9 380 71.3
Potri.009G059900 Populus trichocarpa HOM05D003957 ORTHO05D004833 1.6e-158 563.1 382 70.9
Medtr3g030890 Medicago truncatula HOM05D003957 ORTHO05D004833 2.8e-158 562.4 380 71.1
Sabra09G0044100 Salix brachista HOM05D003957 ORTHO05D004833 3.6e-158 562.0 382 70.7
VMungo1080G1779 Vigna mungo HOM05D003957 ORTHO05D004833 6.1e-158 561.2 381 70.3
Glyma.08G090300 Glycine max HOM05D003957 ORTHO05D004833 8.0e-158 560.8 378 70.9
Medtr4g037515 Medicago truncatula HOM05D003957 ORTHO05D004833 2.3e-157 559.3 379 70.4
TPR.G35301 Trifolium pratense HOM05D003957 ORTHO05D004833 2.3e-157 559.3 380 70.0
Sabra16G0162800 Salix brachista HOM05D003957 ORTHO05D004833 5.2e-157 558.1 407 67.6
Nn2g15304 Nelumbo nucifera HOM05D003957 ORTHO05D004833 8.9e-157 557.4 379 69.1
Sed0012226 Sechium edule HOM05D003957 ORTHO05D004833 8.9e-157 557.4 384 69.5
EL10Ac2g04341 Beta vulgaris HOM05D003531 ORTHO05D004354 1.5e-156 556.6 380 68.7
Phvul.005G024600 Phaseolus vulgaris HOM05D003957 ORTHO05D004833 1.5e-156 556.6 381 70.3
Glyma.10G089600 Glycine max HOM05D003957 ORTHO05D004833 3.4e-156 555.4 380 70.5
Hund21483 Selenicereus undatus HOM05D003957 ORTHO05D004833 3.4e-156 555.4 380 68.4
Migut.B01290 Erythranthe guttata HOM05D003957 ORTHO05D004833 4.4e-156 555.1 382 69.1
Lsat_1_v5_gn_1_106241 Lactuca sativa HOM05D003957 ORTHO05D004833 4.4e-156 555.1 388 69.1
Gorai.004G171700 Gossypium raimondii HOM05D003957 ORTHO05D004833 9.8e-156 553.9 418 65.1
CiPaw.13G005800 Carya illinoinensis HOM05D003957 ORTHO05D004833 1.3e-155 553.5 380 71.1
AUR62009393 Chenopodium quinoa HOM05D003957 ORTHO05D004833 1.3e-155 553.5 380 68.4
Phvul.011G009800 Phaseolus vulgaris HOM05D003957 ORTHO05D004833 1.7e-155 553.1 378 69.3
AT3G63510 Arabidopsis thaliana HOM05D003957 ORTHO05D004833 2.2e-155 552.7 374 69.8
AL5G46370 Arabidopsis lyrata HOM05D003957 ORTHO05D004833 3.7e-155 552.0 369 70.2
Lj3g0028128 Lotus japonicus HOM05D003957 ORTHO05D004833 8.3e-155 550.8 380 70.5
THA.LOC104817580 Tarenaya hassleriana HOM05D003957 ORTHO05D004833 1.4e-154 550.1 369 69.9
FAN03G2622 Fragaria x ananassa HOM05D003957 ORTHO05D004833 1.8e-154 549.7 375 71.2
FAN06G1255 Fragaria x ananassa HOM05D003957 ORTHO05D004833 2.4e-154 549.3 375 71.2
QL04p008303 Quercus lobata HOM05D003957 ORTHO05D004833 3.2e-154 548.9 328 78.7
FAN10G3195 Fragaria x ananassa HOM05D003957 ORTHO05D004833 4.1e-154 548.5 375 70.9
Thhalv10023495m.g Eutrema salsugineum HOM05D003957 ORTHO05D004833 9.2e-154 547.4 375 67.7
AL8G20240 Arabidopsis lyrata HOM05D003957 ORTHO05D004833 3.5e-153 545.4 384 66.9
Sp5g26390 Schrenkiella parvula HOM05D003957 ORTHO05D004833 1.0e-152 543.9 374 67.1
BcaC08g46558 Brassica carinata HOM05D003957 ORTHO05D004833 2.3e-152 542.7 374 68.2
BolC6t39590H Brassica oleracea HOM05D003957 ORTHO05D004833 2.3e-152 542.7 374 68.2
PSO339G1767 Papaver somniferum HOM05D003957 ORTHO05D004833 2.3e-152 542.7 376 68.9
Carub.0008s0751 Capsella rubella HOM05D003957 ORTHO05D004833 2.9e-152 542.3 383 66.8
BraA07t31319Z Brassica rapa HOM05D003957 ORTHO05D004833 3.9e-152 542.0 374 67.9
AT5G47970 Arabidopsis thaliana HOM05D003957 ORTHO05D004833 6.6e-152 541.2 376 67.3
BcaB03g14880 Brassica carinata HOM05D003957 ORTHO05D004833 6.6e-152 541.2 379 67.5
Thhalv10004383m.g Eutrema salsugineum HOM05D003957 ORTHO05D004833 6.6e-152 541.2 384 65.4
ATR0332G004 Amborella trichopoda HOM05D003957 ORTHO05D004833 8.6e-152 540.8 379 67.5
PSO384G3990 Papaver somniferum HOM05D003957 ORTHO05D004833 2.5e-151 539.3 379 67.8
VMungo1127G1153 Vigna mungo HOM05D003957 ORTHO05D004833 2.5e-151 539.3 420 63.1
TAR623G1381 Trochodendron aralioides HOM05D003957 ORTHO05D004833 3.3e-151 538.9 369 69.9
CARHR184310 Cardamine hirsuta HOM05D003957 ORTHO05D004833 4.3e-151 538.5 382 66.5
Ca_14452_v3 Cicer arietinum L. HOM05D003957 ORTHO05D004833 2.1e-150 536.2 348 72.4
Ca_14453_v3 Cicer arietinum L. HOM05D003957 ORTHO05D004833 2.1e-150 536.2 348 72.4
MBI02_g05667_MAGBIO Magnolia biondii HOM05D003957 ORTHO05D004833 2.1e-150 536.2 398 64.6
A06p39430 Brassica napus HOM05D003957 ORTHO05D004833 3.6e-150 535.4 383 66.3
BraA06t26858Z Brassica rapa HOM05D003957 ORTHO05D004833 3.6e-150 535.4 383 66.3
C07p38840 Brassica napus HOM05D003957 ORTHO05D004833 6.8e-149 531.2 376 66.2
A07p37580 Brassica napus HOM05D003957 ORTHO05D004833 1.2e-148 530.4 399 63.7
Sp2g18450 Schrenkiella parvula HOM05D003957 ORTHO05D004833 2.0e-148 529.6 376 65.4
BolC7t44403H Brassica oleracea HOM05D003957 ORTHO05D004833 3.4e-148 528.9 376 65.4
C06p45340 Brassica napus HOM05D003957 ORTHO05D004833 1.7e-147 526.6 399 63.7
BcaC06g30833 Brassica carinata HOM05D003957 ORTHO05D004833 1.9e-146 523.1 376 65.7
Aa31LG5G18360 Aethionema arabicum HOM05D003957 ORTHO05D004833 3.5e-145 518.8 376 65.2
DCAR_029679 Daucus carota HOM05D003957 ORTHO05D004833 3.0e-144 515.8 334 74.0
Aqoxy1G00278 Aquilegia oxysepala HOM05D003957 ORTHO05D004833 1.9e-143 513.1 379 64.1
AUR62023075 Chenopodium quinoa HOM05D003957 ORTHO05D004833 5.6e-143 511.5 411 60.8
AUR62043481 Chenopodium quinoa HOM05D003957 ORTHO05D004833 5.6e-143 511.5 411 60.8
Os04g0278900 Oryza sativa ssp. japonica HOM05D003957 ORTHO05D004833 4.9e-139 498.4 362 64.1
Zm00001eb087020 Zea mays HOM05D003957 ORTHO05D004833 3.3e-135 485.7 326 68.1
arahy.Tifrunner.gnm1.ann1.74EFZ5 Arachis hypogaea HOM05D003957 ORTHO05D004833 1.2e-134 483.8 380 62.1
SEGI_24417 Sequoiadendron giganteum HOM05D003957 ORTHO05D004833 2.8e-134 482.6 342 65.5
Sc11g0009110 Simmondsia chinensis HOM05D003957 ORTHO05D004833 4.7e-134 481.9 324 71.0
vmacro21189 Vaccinium macrocarpon HOM05D003957 ORTHO05D004833 1.7e-131 473.4 352 67.0
Lj7A573G28 Lonicera japonica HOM05D003957 ORTHO05D004833 6.6e-128 461.5 328 67.4
HPP92_026038 Vanilla planifolia HOM05D003957 ORTHO05D004833 2.8e-126 456.1 344 63.7
Mapoly0013s0118 Marchantia polymorpha HOM05D003957 ORTHO05D004833 1.9e-122 443.4 349 59.9
unitig_749.g14329 Utricularia gibba HOM05D003957 ORTHO05D004833 6.0e-121 438.3 362 61.9
Pp3s97_50 Physcomitrium patens HOM05D003957 ORTHO05D004833 1.9e-119 433.3 372 57.5
Psat7g196440 Pisum sativum HOM05D003957 ORTHO05D004833 1.4e-117 427.2 323 65.6
Aa31LG10G17380 Aethionema arabicum HOM05D003957 ORTHO05D004833 6.4e-115 418.3 355 58.6
Glyma.05G135100 Glycine max HOM05D003957 ORTHO05D004833 5.6e-111 405.2 255 74.1
SMO174G0131 Selaginella moellendorffii HOM05D003957 ORTHO05D004833 1.4e-109 400.6 315 58.7
Pp3c7_21950 Physcomitrium patens HOM05D003957 ORTHO05D004833 2.4e-109 399.8 384 51.8
AagrBONN_evm.TU.Sc2ySwM_117.3237 Anthoceros agrestis HOM05D003957 ORTHO05D004833 5.5e-106 388.7 295 61.7
Duzib138G0145 Durio zibethinus HOM05D003957 ORTHO05D004833 7.4e-103 378.3 380 53.2
Lalb_Chr01g0000361 Lupinus albus HOM05D003957 ORTHO05D004833 3.8e-99 365.9 252 70.6
CBR_g45512 Chara braunii HOM05D003957 ORTHO05D004833 1.6e-97 360.5 339 49.3
Carub.0005s3012 Capsella rubella HOM05D003957 ORTHO05D004833 1.9e-95 353.6 252 66.7
HPP92_013484 Vanilla planifolia HOM05D003957 ORTHO05D004833 4.1e-93 345.9 227 70.9
MCO14G372 Micromonas commoda HOM05D003957 ORTHO05D004833 1.3e-83 314.3 376 44.7
CARHR291460 Cardamine hirsuta HOM05D003957 ORTHO05D004833 1.7e-83 313.9 199 71.9
Oeu006567.1 Olea europaea HOM05D003957 ORTHO05D004833 1.0e-75 288.1 379 44.9
Aa31LG11G7420 Aethionema arabicum HOM05D003957 ORTHO05D004833 2.1e-65 253.8 164 71.3
Cre15.g636896 Chlamydomonas reinhardtii HOM05D003957 ORTHO05D004833 2.2e-59 233.8 599 28.7
PRCOL_00006504 Prasinoderma coloniale HOM05D003957 ORTHO05D004833 8.5e-59 231.9 348 38.2
PRCOL_00000364 Prasinoderma coloniale HOM05D003957 ORTHO05D004833 1.6e-52 211.1 321 38.6
MCO15G235 Micromonas commoda HOM05D003957 ORTHO05D004833 1.0e-48 198.4 301 38.9
Ah.00g001360 Amaranthus hybridus HOM05D003957 ORTHO05D004833 1.8e-45 187.6 149 59.7
Aa31LG11G7410 Aethionema arabicum HOM05D003957 ORTHO05D004833 4.5e-44 183.0 148 57.4
FAN03G1487 Fragaria x ananassa HOM05D003957 ORTHO05D004833 5.6e-42 176.0 139 61.9
CSS0043854 Camellia sinensis var. sinensis HOM05D003957 ORTHO05D004833 1.7e-38 164.5 130 60.8
HPP92_013483 Vanilla planifolia HOM05D003957 ORTHO05D004833 3.3e-34 150.2 133 54.9
unitig_749.g13713 Utricularia gibba HOM05D003957 ORTHO05D004833 1.6e-33 147.9 241 38.6
unitig_749.g13714 Utricularia gibba HOM05D003957 ORTHO05D004833 8.0e-33 145.6 85 77.6
PRCOL_00003547 Prasinoderma coloniale HOM05D003957 ORTHO05D004833 8.9e-32 142.1 281 35.6
CSS0024453 Camellia sinensis var. sinensis HOM05D003957 ORTHO05D004833 4.6e-28 129.8 74 79.7
CSS0028199 Camellia sinensis var. sinensis HOM05D003957 ORTHO05D004833 2.6e-23 114.0 87 60.9
Haze_03193 Corylus avellana HOM05D000309 ORTHO05D000008 1.4e-21 108.2 60 78.3
Sopen01g034450 Solanum pennellii HOM05D003957 ORTHO05D030633 5.4e-21 106.3 161 38.5
arahy.Tifrunner.gnm1.ann1.2RNN62 Arachis hypogaea HOM05D000368 ORTHO05D000289 9.2e-21 105.5 66 68.2
Solyc01g087410.4 Solanum lycopersicum HOM05D003531 ORTHO05D004354 1.0e-19 102.1 161 37.3
Cfa010780 Carpinus fangiana HOM05D003957 ORTHO05D004833 3.0e-19 100.5 54 81.5
Gohir.D13G107450 Gossypium hirsutum HOM05D003957 ORTHO05D004833 3.0e-19 100.5 85 58.8
Gorai.007G239900 Gossypium raimondii HOM05D003957 ORTHO05D004833 8.6e-19 99.0 85 58.8
Cfa010787 Carpinus fangiana HOM05D003957 ORTHO05D004833 1.5e-18 98.2 69 71.0
Prupe.2G015100 Prunus persica HOM05D002736 ORTHO05D003882 3.3e-18 97.1 60 71.7
CSS0008275 Camellia sinensis var. sinensis HOM05D003957 ORTHO05D004833 2.1e-17 94.4 56 75.0
Gohir.D04G098500 Gossypium hirsutum HOM05D003957 ORTHO05D004833 2.1e-17 94.4 54 77.8
Gorai.009G400700 Gossypium raimondii HOM05D003957 ORTHO05D004833 2.8e-17 94.0 48 85.4
Lalb_Chr01g0000371 Lupinus albus HOM05D003957 ORTHO05D004833 8.1e-17 92.4 54 74.1
Solyc01g087390.2 Solanum lycopersicum HOM05D003531 ORTHO05D004354 2.3e-16 90.9 187 32.6
vmacro21188 Vaccinium macrocarpon HOM05D003957 ORTHO05D004833 3.1e-16 90.5 78 55.1
BolC6t39673H Brassica oleracea HOM05D003957 ORTHO05D004833 1.2e-15 88.6 69 62.3
RcHm_v2.0_Chr1g0316481 Rosa chinensis HOM05D003957 ORTHO05D037444 1.5e-15 88.2 81 53.1
Solyc01g087370.2 Solanum lycopersicum HOM05D003531 ORTHO05D030633 2.2e-14 84.3 154 34.4
Ah.00g001340 Amaranthus hybridus HOM05D003957 ORTHO05D004833 4.9e-14 83.2 54 70.4
Cre10.g423400 Chlamydomonas reinhardtii HOM05D004284 ORTHO05D044199 6.9e-08 62.8 193 27.5
Sopen01g034430 Solanum pennellii HOM05D003957 ORTHO05D030633 5.8e-07 59.7 86 39.5
Sopen01g034360 Solanum pennellii HOM05D003531 ORTHO05D004354 3.8e-06 57.0 66 50.0


User provided reference genes

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