Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_002643 Daucus carota HOM05D002159 ORTHO05D017878 2.2e-35 151.8 75 100.0
DCAR_026334 Daucus carota HOM05D002159 ORTHO05D005625 9.4e-31 136.3 72 93.1
Lj8C239G4 Lonicera japonica HOM05D002159 ORTHO05D005625 3.8e-24 114.4 72 80.6
Cc02_g02790 Coffea canephora HOM05D002159 ORTHO05D005625 5.0e-24 114.0 72 79.2
CSS0008751 Camellia sinensis var. sinensis HOM05D002159 ORTHO05D005625 8.5e-24 113.2 72 80.6
CSS0044503 Camellia sinensis var. sinensis HOM05D002159 ORTHO05D005625 8.5e-24 113.2 72 80.6
Nitab4.5_0000084g0030 Nicotiana tabacum HOM05D002159 ORTHO05D005625 1.1e-23 112.8 72 77.8
CAN.G1175.3 Capsicum annuum HOM05D002159 ORTHO05D005625 4.2e-23 110.9 72 76.4
Dinv28421 Davidia involucrata HOM05D002159 ORTHO05D005625 4.2e-23 110.9 71 80.3
vmacro06665 Vaccinium macrocarpon HOM05D002159 ORTHO05D005625 7.2e-23 110.2 72 76.4
Peaxi162Scf00444g00532 Petunia axillaris HOM05D002159 ORTHO05D005625 1.2e-22 109.4 70 75.7
Sc13g0008820 Simmondsia chinensis HOM05D002159 ORTHO05D005625 2.1e-22 108.6 72 76.4
Solyc03g025540.3 Solanum lycopersicum HOM05D002159 ORTHO05D005625 2.1e-22 108.6 72 73.6
Sopen03g004380 Solanum pennellii HOM05D002159 ORTHO05D005625 2.1e-22 108.6 72 73.6
Hma1.2p1_1604F.1_g293320 Hydrangea macrophylla HOM05D002159 ORTHO05D005625 2.7e-22 108.2 72 76.4
Nn1g01521 Nelumbo nucifera HOM05D002159 ORTHO05D005625 2.7e-22 108.2 72 73.6
Lalb_Chr03g0034671 Lupinus albus HOM05D002159 ORTHO05D005625 4.7e-22 107.5 72 73.6
Actinidia25881 Actinidia chinensis HOM05D002159 ORTHO05D005625 6.1e-22 107.1 72 75.0
Rhsim03G0187300 Rhododendron simsii HOM05D002159 ORTHO05D005625 6.1e-22 107.1 72 73.6
Thecc.03G179100 Theobroma cacao HOM05D002159 ORTHO05D005625 6.1e-22 107.1 72 73.6
HanXRQChr14g0462121 Helianthus annuus HOM05D002159 ORTHO05D005625 8.0e-22 106.7 71 76.1
Nitab4.5_0004439g0160 Nicotiana tabacum HOM05D002159 ORTHO05D005625 8.0e-22 106.7 73 75.3
Duzib084G0847 Durio zibethinus HOM05D002159 ORTHO05D005625 1.0e-21 106.3 72 72.2
ECA238G4262 Erigeron canadensis HOM05D002159 ORTHO05D005625 1.4e-21 105.9 72 76.4
Potri.001G231800 Populus trichocarpa HOM05D002159 ORTHO05D005625 1.4e-21 105.9 72 72.2
TAR629G0581 Trochodendron aralioides HOM05D002159 ORTHO05D005625 1.4e-21 105.9 72 72.2
GSVIVG01028919001 Vitis vinifera HOM05D002159 ORTHO05D005625 1.4e-21 105.9 71 76.1
PGR142G0288 Punica granatum HOM05D002159 ORTHO05D005625 1.8e-21 105.5 72 73.6
Atru.chr1.430 Acer truncatum HOM05D002159 ORTHO05D005625 2.3e-21 105.1 72 70.8
Gohir.A12G256700 Gossypium hirsutum HOM05D002159 ORTHO05D005625 2.3e-21 105.1 72 72.2
Gohir.D12G258000 Gossypium hirsutum HOM05D002159 ORTHO05D005625 2.3e-21 105.1 72 72.2
Gorai.008G276300 Gossypium raimondii HOM05D002159 ORTHO05D005625 2.3e-21 105.1 72 72.2
Cpa.g.c26789.4 Carica papaya HOM05D002159 ORTHO05D005625 3.0e-21 104.8 71 73.2
Ciclev10004414m.g Citrus clementina HOM05D002159 ORTHO05D005625 3.0e-21 104.8 72 72.2
Sed0009742 Sechium edule HOM05D002159 ORTHO05D005625 3.0e-21 104.8 71 74.6
Duzib205G0713 Durio zibethinus HOM05D002159 ORTHO05D005625 3.9e-21 104.4 72 72.2
Manes.01G126800 Manihot esculenta HOM05D002159 ORTHO05D005625 5.2e-21 104.0 71 71.8
QL09p013785 Quercus lobata HOM05D002159 ORTHO05D005625 5.2e-21 104.0 72 72.2
Cfa023191 Carpinus fangiana HOM05D002159 ORTHO05D005625 8.8e-21 103.2 72 73.6
Prupe.2G296200 Prunus persica HOM05D002159 ORTHO05D005625 8.8e-21 103.2 71 70.4
Hund04761 Selenicereus undatus HOM05D002159 ORTHO05D005625 1.1e-20 102.8 72 73.6
Glyma.09G136900 Glycine max HOM05D002159 ORTHO05D005625 1.5e-20 102.4 71 71.8
Glyma.16G182300 Glycine max HOM05D002159 ORTHO05D005625 1.5e-20 102.4 71 71.8
Sabra16G0139100 Salix brachista HOM05D002159 ORTHO05D005625 1.5e-20 102.4 72 69.4
TWI34G0379 Tripterygium wilfordii HOM05D002159 ORTHO05D005625 1.5e-20 102.4 72 68.1
FvH4_7g29660 Fragaria vesca HOM05D002159 ORTHO05D005625 2.0e-20 102.1 72 69.4
FAN03G0857 Fragaria x ananassa HOM05D002159 ORTHO05D005625 2.0e-20 102.1 72 69.4
FAN03G1172 Fragaria x ananassa HOM05D002159 ORTHO05D005625 2.0e-20 102.1 72 69.4
FAN06G3579 Fragaria x ananassa HOM05D002159 ORTHO05D005625 2.0e-20 102.1 72 69.4
FAN06G4426 Fragaria x ananassa HOM05D002159 ORTHO05D005625 2.0e-20 102.1 72 69.4
FAN10G0118 Fragaria x ananassa HOM05D002159 ORTHO05D005625 2.0e-20 102.1 72 69.4
VMungo0464G2116 Vigna mungo HOM05D002159 ORTHO05D005625 2.0e-20 102.1 72 69.4
Eucgr.K00275 Eucalyptus grandis HOM05D002159 ORTHO05D005625 2.6e-20 101.7 71 71.8
Oeu028430.1 Olea europaea HOM05D002159 ORTHO05D005625 2.6e-20 101.7 70 70.0
Haze_13669 Corylus avellana HOM05D002159 ORTHO05D005625 3.3e-20 101.3 71 73.2
MD01G1203600 Malus domestica HOM05D002159 ORTHO05D005625 3.3e-20 101.3 72 69.4
ClCG05G008140 Citrullus lanatus HOM05D002201 ORTHO05D005625 4.4e-20 100.9 71 73.2
Lsat_1_v5_gn_2_132660 Lactuca sativa HOM05D002159 ORTHO05D005625 4.4e-20 100.9 73 72.6
Phvul.004G114000 Phaseolus vulgaris HOM05D002159 ORTHO05D005625 5.7e-20 100.5 71 69.0
Actinidia34126 Actinidia chinensis HOM05D002159 ORTHO05D005625 7.4e-20 100.1 72 69.4
CiPaw.03G108100 Carya illinoinensis HOM05D002159 ORTHO05D005625 7.4e-20 100.1 72 70.8
Glyma.11G170601 Glycine max HOM05D002159 ORTHO05D005625 7.4e-20 100.1 71 70.4
RcHm_v2.0_Chr1g0377681 Rosa chinensis HOM05D002159 ORTHO05D005625 7.4e-20 100.1 72 66.7
CANSAT21G0489 Cannabis sativa HOM05D002159 ORTHO05D005625 9.7e-20 99.8 72 69.4
Lj2g0019958 Lotus japonicus HOM05D002159 ORTHO05D005625 9.7e-20 99.8 71 69.0
SalBow2G1087 Salvia bowleyana HOM05D002159 ORTHO05D005625 9.7e-20 99.8 64 78.1
MELO3C006919.2 Cucumis melo HOM05D002159 ORTHO05D005625 1.7e-19 99.0 71 71.8
CsaV3_3G017220 Cucumis sativus L. HOM05D002159 ORTHO05D005625 1.7e-19 99.0 71 71.8
Migut.F01111 Erythranthe guttata HOM05D002159 ORTHO05D005625 1.7e-19 99.0 72 75.0
MD07G1272900 Malus domestica HOM05D002159 ORTHO05D005625 2.2e-19 98.6 72 66.7
EL10Ac3g05612 Beta vulgaris HOM05D002159 ORTHO05D005625 3.7e-19 97.8 72 72.2
PSO478G3748 Papaver somniferum HOM05D002159 ORTHO05D005625 4.8e-19 97.4 72 65.3
PSO782G0249 Papaver somniferum HOM05D002159 ORTHO05D005625 4.8e-19 97.4 72 65.3
THA.LOC104821393 Tarenaya hassleriana HOM05D002159 ORTHO05D005625 4.8e-19 97.4 74 64.9
SGA_v2.0_scaffold10G05332 Striga asiatica HOM05D002159 ORTHO05D005625 8.2e-19 96.7 73 69.9
CDE06G0059 Ceratophyllum demersum HOM05D002159 ORTHO05D005625 1.1e-18 96.3 65 69.2
Ca_14555_v3 Cicer arietinum L. HOM05D002159 ORTHO05D005625 1.1e-18 96.3 72 65.3
CARHR189680 Cardamine hirsuta HOM05D002159 ORTHO05D005625 1.4e-18 95.9 72 62.5
AUR62015961 Chenopodium quinoa HOM05D002159 ORTHO05D005625 1.4e-18 95.9 71 71.8
AUR62021167 Chenopodium quinoa HOM05D002159 ORTHO05D005625 1.4e-18 95.9 71 71.8
FAN01G0872 Fragaria x ananassa HOM05D002159 ORTHO05D005625 1.8e-18 95.5 78 64.1
Aqoxy7G00327 Aquilegia oxysepala HOM05D002159 ORTHO05D005625 3.1e-18 94.7 72 66.7
AL6G35190 Arabidopsis lyrata HOM05D002159 ORTHO05D005625 5.3e-18 94.0 72 63.9
Sp2g23400 Schrenkiella parvula HOM05D002159 ORTHO05D005625 5.3e-18 94.0 72 63.9
Medtr1g050492 Medicago truncatula HOM05D002159 ORTHO05D005625 9.1e-18 93.2 72 63.9
Thhalv10003707m.g Eutrema salsugineum HOM05D002159 ORTHO05D005625 1.2e-17 92.8 72 62.5
AT5G23880 Arabidopsis thaliana HOM05D002159 ORTHO05D005625 2.0e-17 92.0 72 62.5
TPR.G8152 Trifolium pratense HOM05D002159 ORTHO05D005625 3.5e-17 91.3 71 63.4
BcaNung05470 Brassica carinata HOM05D002159 ORTHO05D005625 4.5e-17 90.9 69 62.3
Ah.13g068620 Amaranthus hybridus HOM05D002159 ORTHO05D005625 5.9e-17 90.5 62 74.2
BcaNung05469 Brassica carinata HOM05D002159 ORTHO05D005625 5.9e-17 90.5 69 62.3
A06p34690 Brassica napus HOM05D002159 ORTHO05D005625 5.9e-17 90.5 69 62.3
C07p43800 Brassica napus HOM05D002159 ORTHO05D005625 5.9e-17 90.5 69 62.3
BolC7t44909H Brassica oleracea HOM05D002159 ORTHO05D005625 5.9e-17 90.5 69 62.3
BraA06t26396Z Brassica rapa HOM05D002159 ORTHO05D005625 5.9e-17 90.5 69 62.3
Carub.0006s2160 Capsella rubella HOM05D002159 ORTHO05D005625 7.7e-17 90.1 72 61.1
MELO3C035667.2 Cucumis melo HOM05D002159 ORTHO05D017878 1.7e-16 89.0 71 64.8
HPP92_025730 Vanilla planifolia HOM05D002159 ORTHO05D005625 1.1e-15 86.3 64 64.1
HPP92_025733 Vanilla planifolia HOM05D002159 ORTHO05D005625 1.1e-15 86.3 64 64.1
BcaNung01838 Brassica carinata HOM05D002159 ORTHO05D005625 4.2e-15 84.3 60 65.0
Os09g0569400 Oryza sativa ssp. japonica HOM05D002159 ORTHO05D005625 7.2e-15 83.6 71 60.6
arahy.Tifrunner.gnm1.ann1.F9YRCX Arachis hypogaea HOM05D002159 ORTHO05D005625 2.1e-14 82.0 60 63.3
Aa31LG11G3180 Aethionema arabicum HOM05D002159 ORTHO05D005625 3.6e-14 81.3 101 46.5
Zm00001eb162800 Zea mays HOM05D002159 ORTHO05D005625 1.4e-13 79.3 71 59.2
ATR0680G292 Amborella trichopoda HOM05D002159 ORTHO05D005625 5.2e-13 77.4 73 57.5
MELO3C034434.2 Cucumis melo HOM05D002159 ORTHO05D017878 1.2e-12 76.3 66 60.6
Lj1E1000G1 Lonicera japonica HOM05D002159 ORTHO05D017878 5.7e-12 73.9 49 75.5
MELO3C033916.2 Cucumis melo HOM05D002159 ORTHO05D017878 3.7e-11 71.2 65 60.0
COL.COLO4_28055 Corchorus olitorius HOM05D002159 ORTHO05D017878 1.1e-10 69.7 49 69.4
AagrBONN_evm.TU.Sc2ySwM_117.3689 Anthoceros agrestis HOM05D002159 ORTHO05D005625 4.1e-10 67.8 62 48.4
SMO111G0062 Selaginella moellendorffii HOM05D002159 ORTHO05D005625 2.0e-09 65.5 58 50.0
Pp3c9_11100 Physcomitrium patens HOM05D002159 ORTHO05D005625 3.5e-09 64.7 62 51.6
Mapoly0007s0176 Marchantia polymorpha HOM05D002159 ORTHO05D005625 4.5e-09 64.3 58 53.4
SHI10395 Sapria himalayana HOM05D002159 ORTHO05D005625 4.7e-06 54.3 40 65.0


User provided reference genes

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