Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_6G005290 Cucumis sativus L. HOM05D004026 ORTHO05D004712 5.7e-59 230.7 118 100.0
CsaV3_1G019700 Cucumis sativus L. HOM05D004026 ORTHO05D004712 9.5e-46 186.8 126 81.7
MELO3C008344.2 Cucumis melo HOM05D004026 ORTHO05D004712 5.4e-33 144.4 123 70.7
ClCG08G006960 Citrullus lanatus HOM05D004026 ORTHO05D004712 2.7e-32 142.1 123 69.9
Sed0010346 Sechium edule HOM05D004026 ORTHO05D004712 2.7e-32 142.1 123 69.9
Sed0019016 Sechium edule HOM05D004026 ORTHO05D004712 2.3e-31 139.0 123 68.3
Gohir.A02G112705 Gossypium hirsutum HOM05D004026 ORTHO05D004712 3.9e-31 138.3 123 67.5
Cpa.g.sc2145.2 Carica papaya HOM05D004026 ORTHO05D004712 6.6e-31 137.5 123 67.5
Dinv41090 Davidia involucrata HOM05D004026 ORTHO05D004712 6.6e-31 137.5 123 67.5
Hund26698 Selenicereus undatus HOM05D004026 ORTHO05D004712 6.6e-31 137.5 123 67.5
Nn5g28727 Nelumbo nucifera HOM05D004026 ORTHO05D004712 8.6e-31 137.1 123 66.7
Glyma.16G167900 Glycine max HOM05D004026 ORTHO05D004712 1.5e-30 136.3 123 66.7
Gorai.002G055500 Gossypium raimondii HOM05D004026 ORTHO05D004712 1.5e-30 136.3 123 66.7
Phvul.004G095700 Phaseolus vulgaris HOM05D004026 ORTHO05D004712 1.5e-30 136.3 123 66.7
Ciclev10002950m.g Citrus clementina HOM05D004026 ORTHO05D004712 1.9e-30 136.0 123 66.7
Manes.18G091400 Manihot esculenta HOM05D004026 ORTHO05D004712 1.9e-30 136.0 123 66.7
Potri.005G191600 Populus trichocarpa HOM05D004026 ORTHO05D004712 1.9e-30 136.0 123 66.7
Sabra05G0146400 Salix brachista HOM05D004026 ORTHO05D004712 1.9e-30 136.0 123 66.7
TWI34G0684 Tripterygium wilfordii HOM05D004026 ORTHO05D004712 1.9e-30 136.0 123 65.9
Ah.05g167900 Amaranthus hybridus HOM05D004026 ORTHO05D004712 2.5e-30 135.6 122 67.2
EL10Ac1g01537 Beta vulgaris HOM05D004026 ORTHO05D004712 2.5e-30 135.6 122 67.2
Nn1g06097 Nelumbo nucifera HOM05D004026 ORTHO05D004712 2.5e-30 135.6 123 65.9
Nitab4.5_0000964g0020 Nicotiana tabacum HOM05D004026 ORTHO05D004712 2.5e-30 135.6 123 65.0
Dinv25856 Davidia involucrata HOM05D004026 ORTHO05D004712 4.3e-30 134.8 123 65.9
Duzib116G0179 Durio zibethinus HOM05D004026 ORTHO05D004712 4.3e-30 134.8 123 65.9
Eucgr.F02710 Eucalyptus grandis HOM05D004026 ORTHO05D004712 4.3e-30 134.8 123 65.9
Glyma.02G082300 Glycine max HOM05D004026 ORTHO05D004712 4.3e-30 134.8 123 65.0
Gohir.A05G243000 Gossypium hirsutum HOM05D004026 ORTHO05D004712 4.3e-30 134.8 123 65.9
Gohir.D05G244500 Gossypium hirsutum HOM05D004026 ORTHO05D004712 4.3e-30 134.8 123 65.9
Gorai.009G253600 Gossypium raimondii HOM05D004026 ORTHO05D004712 4.3e-30 134.8 123 65.9
PGR042G0059 Punica granatum HOM05D004026 ORTHO05D004712 4.3e-30 134.8 123 65.9
Thecc.08G150600 Theobroma cacao HOM05D004026 ORTHO05D004712 4.3e-30 134.8 123 65.9
ECA236G1806 Erigeron canadensis HOM05D004026 ORTHO05D004712 5.6e-30 134.4 123 65.9
HanXRQChr06g0182631 Helianthus annuus HOM05D004026 ORTHO05D004712 5.6e-30 134.4 123 65.9
HanXRQChr11g0339331 Helianthus annuus HOM05D004026 ORTHO05D004712 5.6e-30 134.4 123 65.9
Lsat_1_v5_gn_7_71840 Lactuca sativa HOM05D004026 ORTHO05D004712 5.6e-30 134.4 123 65.9
Lj2g0026454 Lotus japonicus HOM05D004026 ORTHO05D004712 5.6e-30 134.4 123 65.9
QL02p024017 Quercus lobata HOM05D004026 ORTHO05D004712 5.6e-30 134.4 121 66.1
QL09p017237 Quercus lobata HOM05D004026 ORTHO05D004712 5.6e-30 134.4 121 66.1
TAR381G0202 Trochodendron aralioides HOM05D004026 ORTHO05D004712 5.6e-30 134.4 123 65.0
Actinidia06668 Actinidia chinensis HOM05D004026 ORTHO05D004712 7.3e-30 134.0 123 65.0
CANSAT25G0019 Cannabis sativa HOM05D004026 ORTHO05D004712 7.3e-30 134.0 123 65.9
CAN.G249.12 Capsicum annuum HOM05D004026 ORTHO05D004712 7.3e-30 134.0 123 65.0
Potri.002G068800 Populus trichocarpa HOM05D004026 ORTHO05D004712 7.3e-30 134.0 123 65.9
Solyc11g005370.2 Solanum lycopersicum HOM05D004026 ORTHO05D004712 7.3e-30 134.0 123 65.0
Sopen11g001380 Solanum pennellii HOM05D004026 ORTHO05D004712 7.3e-30 134.0 123 65.0
PGSC0003DMG400003988 Solanum tuberosum HOM05D004026 ORTHO05D004712 7.3e-30 134.0 123 65.0
Atru.chr13.2143 Acer truncatum HOM05D004026 ORTHO05D004712 9.6e-30 133.7 123 65.0
arahy.Tifrunner.gnm1.ann1.9PQ1GY Arachis hypogaea HOM05D004026 ORTHO05D004712 9.6e-30 133.7 122 66.4
arahy.Tifrunner.gnm1.ann1.XJQY2Y Arachis hypogaea HOM05D004026 ORTHO05D004712 9.6e-30 133.7 122 66.4
MBI09_g18621_MAGBIO Magnolia biondii HOM05D004026 ORTHO05D004712 9.6e-30 133.7 122 66.4
COL.COLO4_37834 Corchorus olitorius HOM05D004026 ORTHO05D004712 1.2e-29 133.3 114 66.7
Gohir.D03G060607 Gossypium hirsutum HOM05D004026 ORTHO05D004712 1.2e-29 133.3 123 65.9
SalBow6G5104 Salvia bowleyana HOM05D004026 ORTHO05D004712 1.2e-29 133.3 123 65.9
SEGI_01220 Sequoiadendron giganteum HOM05D004026 ORTHO05D004712 1.2e-29 133.3 121 65.3
THA.LOC104813712 Tarenaya hassleriana HOM05D004026 ORTHO05D004712 1.2e-29 133.3 123 65.0
TAR625G0830 Trochodendron aralioides HOM05D004026 ORTHO05D004712 1.2e-29 133.3 123 64.2
TAR628G0743 Trochodendron aralioides HOM05D004026 ORTHO05D004712 1.2e-29 133.3 123 64.2
HPP92_016150 Vanilla planifolia HOM05D004026 ORTHO05D004712 1.2e-29 133.3 123 65.0
Manes.02G178900 Manihot esculenta HOM05D004026 ORTHO05D004712 1.6e-29 132.9 123 65.0
Medtr4g083170 Medicago truncatula HOM05D004026 ORTHO05D004712 1.6e-29 132.9 121 66.1
Psat7g153480 Pisum sativum HOM05D004026 ORTHO05D004712 1.6e-29 132.9 121 66.1
Sabra02G0054100 Salix brachista HOM05D004026 ORTHO05D004712 1.6e-29 132.9 123 65.0
Hma1.2p1_0105F.1_g050760 Hydrangea macrophylla HOM05D004026 ORTHO05D004712 2.1e-29 132.5 123 65.0
Phvul.004G129000 Phaseolus vulgaris HOM05D004026 ORTHO05D004712 2.1e-29 132.5 123 65.0
Migut.N03226 Erythranthe guttata HOM05D004026 ORTHO05D004712 2.8e-29 132.1 123 65.0
FvH4_2g13861 Fragaria vesca HOM05D004026 ORTHO05D004712 2.8e-29 132.1 123 64.2
FAN15G1801 Fragaria x ananassa HOM05D004026 ORTHO05D004712 2.8e-29 132.1 123 64.2
FAN20G2578 Fragaria x ananassa HOM05D004026 ORTHO05D004712 2.8e-29 132.1 123 64.2
FAN27G2615 Fragaria x ananassa HOM05D004026 ORTHO05D004712 2.8e-29 132.1 123 64.2
Lj1g0021939 Lotus japonicus HOM05D004026 ORTHO05D004712 2.8e-29 132.1 120 66.7
RcHm_v2.0_Chr6g0275571 Rosa chinensis HOM05D004026 ORTHO05D004712 2.8e-29 132.1 123 64.2
THA.LOC104812039 Tarenaya hassleriana HOM05D004026 ORTHO05D004712 2.8e-29 132.1 123 64.2
Duzib093G0799 Durio zibethinus HOM05D004026 ORTHO05D004712 3.6e-29 131.7 123 65.0
Migut.C01015 Erythranthe guttata HOM05D004026 ORTHO05D004712 3.6e-29 131.7 123 64.2
FAN24G0951 Fragaria x ananassa HOM05D004026 ORTHO05D004712 3.6e-29 131.7 123 63.4
Oeu046026.1 Olea europaea HOM05D004026 ORTHO05D004712 3.6e-29 131.7 123 65.0
Peaxi162Scf00583g00530 Petunia axillaris HOM05D004026 ORTHO05D004712 3.6e-29 131.7 120 65.8
Hma1.2p1_0006F.1_g004910 Hydrangea macrophylla HOM05D004026 ORTHO05D004712 4.7e-29 131.3 123 63.4
Lalb_Chr03g0035271 Lupinus albus HOM05D004026 ORTHO05D004712 4.7e-29 131.3 121 65.3
Pp3c24_12260 Physcomitrium patens HOM05D004026 ORTHO05D004712 4.7e-29 131.3 121 64.5
TPR.G14063 Trifolium pratense HOM05D004026 ORTHO05D004712 4.7e-29 131.3 121 65.3
TPR.G8174 Trifolium pratense HOM05D004026 ORTHO05D004712 4.7e-29 131.3 121 65.3
Cfa018326 Carpinus fangiana HOM05D004026 ORTHO05D004712 6.2e-29 131.0 133 60.2
CDE06G1840 Ceratophyllum demersum HOM05D004026 ORTHO05D004712 6.2e-29 131.0 123 63.4
CDE08G0955 Ceratophyllum demersum HOM05D004026 ORTHO05D004712 6.2e-29 131.0 123 63.4
Lalb_Chr01g0009621 Lupinus albus HOM05D004026 ORTHO05D004712 6.2e-29 131.0 120 65.8
MD05G1024000 Malus domestica HOM05D004026 ORTHO05D004712 6.2e-29 131.0 123 64.2
MD10G1024500 Malus domestica HOM05D004026 ORTHO05D004712 6.2e-29 131.0 123 64.2
Prupe.8G028400 Prunus persica HOM05D004026 ORTHO05D004712 6.2e-29 131.0 123 63.4
unitig_744.g24567 Utricularia gibba HOM05D004026 ORTHO05D004712 6.2e-29 131.0 123 64.2
Aqoxy5G02098 Aquilegia oxysepala HOM05D004026 ORTHO05D004712 8.1e-29 130.6 123 63.4
PSO541G1854 Papaver somniferum HOM05D004026 ORTHO05D004712 8.1e-29 130.6 120 65.0
PSO675G7538 Papaver somniferum HOM05D004026 ORTHO05D004712 8.1e-29 130.6 120 65.0
Cc10_g14760 Coffea canephora HOM05D004026 ORTHO05D004712 1.1e-28 130.2 122 64.8
Aa31LG4G6900 Aethionema arabicum HOM05D004026 ORTHO05D004712 1.4e-28 129.8 123 61.8
CSS0019157 Camellia sinensis var. sinensis HOM05D004026 ORTHO05D004712 1.4e-28 129.8 123 64.2
Dinv09936 Davidia involucrata HOM05D004026 ORTHO05D004712 1.4e-28 129.8 123 63.4
Rhsim06G0071000 Rhododendron simsii HOM05D004026 ORTHO05D004712 1.4e-28 129.8 123 62.6
Rhsim06G0135800 Rhododendron simsii HOM05D004026 ORTHO05D004712 1.4e-28 129.8 123 62.6
Zm00001eb146730 Zea mays HOM05D004026 ORTHO05D004712 1.4e-28 129.8 122 63.9
Peaxi162Scf00025g02218 Petunia axillaris HOM05D004026 ORTHO05D004712 1.8e-28 129.4 124 64.5
unitig_21.g20177 Utricularia gibba HOM05D004026 ORTHO05D004712 1.8e-28 129.4 123 63.4
Mapoly0008s0084 Marchantia polymorpha HOM05D004026 ORTHO05D004712 2.4e-28 129.0 121 62.8
Aa31LG7G5300 Aethionema arabicum HOM05D004026 ORTHO05D004712 4.0e-28 128.3 123 60.2
AagrBONN_evm.TU.Sc2ySwM_117.2023 Anthoceros agrestis HOM05D004026 ORTHO05D004712 5.2e-28 127.9 121 62.8
AT1G76860 Arabidopsis thaliana HOM05D004026 ORTHO05D004712 6.9e-28 127.5 121 61.2
Sp1g18830 Schrenkiella parvula HOM05D004026 ORTHO05D004712 6.9e-28 127.5 123 60.2
AL1G34240 Arabidopsis lyrata HOM05D004026 ORTHO05D004712 8.9e-28 127.1 121 60.3
AT1G21190 Arabidopsis thaliana HOM05D004026 ORTHO05D004712 8.9e-28 127.1 123 59.3
AUR62026713 Chenopodium quinoa HOM05D004026 ORTHO05D004712 1.2e-27 126.7 117 62.4
AL2G36980 Arabidopsis lyrata HOM05D004026 ORTHO05D004712 1.5e-27 126.3 121 60.3
BcaB07g32108 Brassica carinata HOM05D004026 ORTHO05D004712 1.5e-27 126.3 123 60.2
A06p17220 Brassica napus HOM05D004026 ORTHO05D004712 1.5e-27 126.3 123 60.2
BraA06t24824Z Brassica rapa HOM05D004026 ORTHO05D004712 1.5e-27 126.3 123 60.2
Carub.0001s2062 Capsella rubella HOM05D004026 ORTHO05D004712 2.0e-27 125.9 123 58.5
CARHR070370 Cardamine hirsuta HOM05D004026 ORTHO05D004712 3.4e-27 125.2 121 60.3
CARHR021640 Cardamine hirsuta HOM05D004026 ORTHO05D004712 4.4e-27 124.8 121 59.5
Os01g0866700 Oryza sativa ssp. japonica HOM05D004026 ORTHO05D004712 4.4e-27 124.8 118 63.6
DCAR_014432 Daucus carota HOM05D004026 ORTHO05D004712 5.8e-27 124.4 118 64.4
Haze_17748 Corylus avellana HOM05D004026 ORTHO05D004712 7.6e-27 124.0 140 57.9
SMO169G0100 Selaginella moellendorffii HOM05D004026 ORTHO05D004712 7.6e-27 124.0 123 60.2
BcaB02g07078 Brassica carinata HOM05D004026 ORTHO05D004712 9.9e-27 123.6 123 59.3
BcaC08g45508 Brassica carinata HOM05D004026 ORTHO05D004712 9.9e-27 123.6 123 59.3
A07p28330 Brassica napus HOM05D004026 ORTHO05D004712 9.9e-27 123.6 123 59.3
C06p31770 Brassica napus HOM05D004026 ORTHO05D004712 9.9e-27 123.6 123 59.3
BolC6t38306H Brassica oleracea HOM05D004026 ORTHO05D004712 9.9e-27 123.6 123 59.3
BraA07t30470Z Brassica rapa HOM05D004026 ORTHO05D004712 9.9e-27 123.6 123 59.3
ATR0772G183 Amborella trichopoda HOM05D004026 ORTHO05D004712 1.7e-26 122.9 122 60.7
Carub.0002s2374 Capsella rubella HOM05D004026 ORTHO05D004712 1.7e-26 122.9 123 57.7
Thhalv10019321m.g Eutrema salsugineum HOM05D004026 ORTHO05D004712 2.2e-26 122.5 120 59.2
Sp5g31990 Schrenkiella parvula HOM05D004026 ORTHO05D004712 2.9e-26 122.1 120 60.0
BcaC03g15707 Brassica carinata HOM05D004026 ORTHO05D004712 4.9e-26 121.3 120 59.2
BcaC08g47186 Brassica carinata HOM05D004026 ORTHO05D004712 4.9e-26 121.3 123 58.5
A02p20950 Brassica napus HOM05D004026 ORTHO05D004712 4.9e-26 121.3 120 59.2
A07p42450 Brassica napus HOM05D004026 ORTHO05D004712 4.9e-26 121.3 123 58.5
C02p34120 Brassica napus HOM05D004026 ORTHO05D004712 4.9e-26 121.3 120 59.2
C06p51010 Brassica napus HOM05D004026 ORTHO05D004712 4.9e-26 121.3 123 58.5
BolC2t09428H Brassica oleracea HOM05D004026 ORTHO05D004712 4.9e-26 121.3 120 59.2
BolC6t40126H Brassica oleracea HOM05D004026 ORTHO05D004712 4.9e-26 121.3 123 58.5
BraA02t07126Z Brassica rapa HOM05D004026 ORTHO05D004712 4.9e-26 121.3 120 59.2
BraA07t31770Z Brassica rapa HOM05D004026 ORTHO05D004712 4.9e-26 121.3 123 58.5
BcaB05g25014 Brassica carinata HOM05D004026 ORTHO05D004712 1.1e-25 120.2 120 59.2
Cre16.g662300 Chlamydomonas reinhardtii HOM05D004026 ORTHO05D004712 1.4e-25 119.8 112 56.2
MCO12G407 Micromonas commoda HOM05D004026 ORTHO05D004712 2.4e-25 119.0 113 57.5
Nitab4.5_0010284g0010 Nicotiana tabacum HOM05D004026 ORTHO05D004712 2.7e-24 115.5 61 95.1
BcaC05g26025 Brassica carinata HOM05D004026 ORTHO05D004712 1.3e-23 113.2 119 56.3
BolC5t30689H Brassica oleracea HOM05D004026 ORTHO05D004712 1.3e-23 113.2 119 56.3
Nitab4.5_0002064g0050 Nicotiana tabacum HOM05D004026 ORTHO05D004712 1.3e-23 113.2 58 94.8
Sc02g0004120 Simmondsia chinensis HOM05D004026 ORTHO05D004712 2.3e-23 112.5 59 94.9
SHI20484 Sapria himalayana HOM05D004026 ORTHO05D004712 9.6e-22 107.1 59 86.4
PRCOL_00001118 Prasinoderma coloniale HOM05D004026 ORTHO05D004712 8.1e-21 104.0 122 50.8
Oeu011940.1 Olea europaea HOM05D004026 ORTHO05D004712 3.8e-18 95.1 52 92.3
CiPaw.15G016800 Carya illinoinensis HOM05D004026 ORTHO05D004712 1.4e-17 93.2 52 90.4
RcHm_v2.0_Chr6g0275581 Rosa chinensis HOM05D004026 ORTHO05D004712 4.2e-17 91.7 52 88.5
GSVIVG01034520001 Vitis vinifera HOM05D004026 ORTHO05D004712 4.2e-17 91.7 102 56.9
TWI60G1706 Tripterygium wilfordii HOM05D004026 ORTHO05D004712 6.0e-16 87.8 96 59.4
MD10G1024600 Malus domestica HOM05D004026 ORTHO05D004712 1.0e-15 87.0 106 55.7
CiPaw.16G013200 Carya illinoinensis HOM05D004026 ORTHO05D004712 1.3e-15 86.7 96 58.3
Nitab4.5_0000004g0160 Nicotiana tabacum HOM05D004026 ORTHO05D004712 1.8e-15 86.3 96 57.3
Prupe.3G148200 Prunus persica HOM05D004026 ORTHO05D004712 1.8e-15 86.3 96 58.3
Rhsim10G0141800 Rhododendron simsii HOM05D004026 ORTHO05D004712 3.9e-15 85.1 96 57.3
Ca_28109_v3 Cicer arietinum L. HOM05D004026 ORTHO05D004712 1.1e-14 83.6 93 59.1
Haze_27742 Corylus avellana HOM05D004026 ORTHO05D004712 1.1e-14 83.6 114 43.0
AUR62013577 Chenopodium quinoa HOM05D004026 ORTHO05D004712 1.5e-14 83.2 95 56.8
SalBow4G0880 Salvia bowleyana HOM05D004026 ORTHO05D004712 1.8e-12 76.3 118 48.3
C05p19920 Brassica napus HOM05D004026 ORTHO05D004712 2.0e-11 72.8 92 48.9
MSTRG.22373 Avicennia marina HOM05D004026 ORTHO05D004712 2.6e-11 72.4 93 49.5
vmacro12827 Vaccinium macrocarpon HOM05D004026 ORTHO05D004712 3.4e-11 72.0 137 40.1
Cfa023910 Carpinus fangiana HOM05D004026 ORTHO05D004712 1.6e-08 63.2 108 34.3
Glyma.10G120000 Glycine max HOM05D004026 ORTHO05D004712 7.9e-08 60.8 86 50.0


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