Gene: Zm00001eb146730

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb146730
  • Transcript Identifier Zm00001eb146730_T001
  • Gene Type Coding gene
  • Location 3 : 180471864-180474566 : positive

Gene Family Information

  • ID HOM05D004026
  • #Genes/#Species 174/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb146730_T001
  • pid Zm00001eb146730_P001
  • uniprot B4FIF0
  • uniprot A0A3L6FE47
  • uniprot B4FPJ2
  • uniprot A0A1D6N6G2
  • V4_identifier Zm00001d042725

Descriptions

  • Description Zm00001e019167
  • Description Sm-like protein LSM3B
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IBA
IEA
GOA DatabasemRNA splicing, via spliceosome
GO:0000398
IEA
InterPromRNA splicing, via spliceosome
GO:0033962
IBA
GOA DatabaseP-body assembly
GO:0008380
IEA
GOA DatabaseRNA splicing
GO:0006397
IEA
GOA DatabasemRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IBA
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071013
IBA
GOA Databasecatalytic step 2 spliceosome
GO:0071011
IBA
GOA Databaseprecatalytic spliceosome
GO:0046540
IBA
IEA
GOA DatabaseU4/U6 x U5 tri-snRNP complex
GO:0005688
IBA
IEA
GOA DatabaseU6 snRNP
GO:0000932
IBA
GOA DatabaseP-body
GO:1990726
IBA
GOA DatabaseLsm1-7-Pat1 complex
GO:0005681
IEA
GOA Databasespliceosomal complex
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR034105 Sm-like protein Lsm3
IPR001163 LSM domain, eukaryotic/archaea-type
IPR010920 LSM domain superfamily
IPR040002 U6 snRNA-associated Sm-like protein Lsm3
Mapman id Description
16.2.3.3 RNA processing.pre-mRNA splicing.U6-associated LSm accessory ribonucleoprotein complex.component LSm3