Gene: BraA07t30470Z

General Information

Structural Information

  • Species Brassica rapa
  • Gene Identifier BraA07t30470Z
  • Transcript Identifier BraA07t30470Z
  • Gene Type Coding gene
  • Location A07 : 19771689-19772626 : positive

Gene Family Information

  • ID HOM05D004026
  • #Genes/#Species 174/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • uniprot A0A397YXY8

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IEA
GOA DatabasemRNA splicing, via spliceosome
GO:0000398
IEA
InterPromRNA splicing, via spliceosome
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0008380
IEA
GOA DatabaseRNA splicing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046540
IEA
GOA DatabaseU4/U6 x U5 tri-snRNP complex
GO:0005688
IEA
GOA DatabaseU6 snRNP
GO:0005634
IEA
GOA Databasenucleus
GO:0005681
IEA
GOA Databasespliceosomal complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001163 LSM domain, eukaryotic/archaea-type
IPR034105 Sm-like protein Lsm3
IPR010920 LSM domain superfamily
IPR040002 U6 snRNA-associated Sm-like protein Lsm3
Mapman id Description
16.2.3.3 RNA processing.pre-mRNA splicing.U6-associated LSm accessory ribonucleoprotein complex.component LSm3