Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre07.g338400 Chlamydomonas reinhardtii HOM05D005140 ORTHO05D006288 2.7e-228 795.0 413 100.0
Glyma.01G204000 Glycine max HOM05D005140 ORTHO05D006288 3.6e-31 140.2 270 35.9
AT4G17620 Arabidopsis thaliana HOM05D005140 ORTHO05D006288 1.8e-30 137.9 294 35.0
Glyma.11G039000 Glycine max HOM05D005140 ORTHO05D006288 2.3e-30 137.5 270 35.2
Phvul.002G002400 Phaseolus vulgaris HOM05D005140 ORTHO05D006288 2.3e-30 137.5 270 35.6
Ca_24617_v3 Cicer arietinum L. HOM05D005140 ORTHO05D006288 3.0e-30 137.1 270 34.4
GSVIVG01013286001 Vitis vinifera HOM05D005140 ORTHO05D006288 3.0e-30 137.1 270 34.8
C07p48890 Brassica napus HOM05D005140 ORTHO05D006288 4.0e-30 136.7 255 36.1
TWI60G0080 Tripterygium wilfordii HOM05D005140 ORTHO05D006288 5.2e-30 136.3 275 34.9
Prupe.5G053400 Prunus persica HOM05D005140 ORTHO05D006288 6.7e-30 136.0 269 34.2
Migut.F01520 Erythranthe guttata HOM05D005140 ORTHO05D006288 1.2e-29 135.2 272 33.1
Gohir.A08G162300 Gossypium hirsutum HOM05D005140 ORTHO05D006288 2.0e-29 134.4 275 34.5
BcaC06g33554 Brassica carinata HOM05D005140 ORTHO05D006288 2.6e-29 134.0 255 35.7
A03p50570 Brassica napus HOM05D005140 ORTHO05D006288 2.6e-29 134.0 255 35.7
BolC7t45397H Brassica oleracea HOM05D005140 ORTHO05D006288 2.6e-29 134.0 255 35.7
BraA03t14147Z Brassica rapa HOM05D005140 ORTHO05D006288 2.6e-29 134.0 255 35.7
AUR62018812 Chenopodium quinoa HOM05D005140 ORTHO05D006288 2.6e-29 134.0 259 33.6
DCAR_008319 Daucus carota HOM05D005140 ORTHO05D006288 2.6e-29 134.0 270 34.4
ATR0665G273 Amborella trichopoda HOM05D005140 ORTHO05D006288 3.3e-29 133.7 272 33.8
HanXRQChr03g0089631 Helianthus annuus HOM05D005140 ORTHO05D006288 3.3e-29 133.7 270 33.3
C01p11300 Brassica napus HOM05D005140 ORTHO05D006288 4.4e-29 133.3 271 34.7
ECA240G1687 Erigeron canadensis HOM05D005140 ORTHO05D006288 4.4e-29 133.3 280 33.6
Lalb_Chr09g0324091 Lupinus albus HOM05D005140 ORTHO05D006288 4.4e-29 133.3 270 35.6
Solyc08g077750.4 Solanum lycopersicum HOM05D005140 ORTHO05D006288 4.4e-29 133.3 269 34.9
Sopen08g026270 Solanum pennellii HOM05D005140 ORTHO05D006288 4.4e-29 133.3 269 34.6
Lj2g0026795 Lotus japonicus HOM05D005140 ORTHO05D006288 5.7e-29 132.9 275 34.5
MELO3C003340.2 Cucumis melo HOM05D005140 ORTHO05D006288 7.5e-29 132.5 274 33.9
CARHR224350 Cardamine hirsuta HOM05D005140 ORTHO05D006288 9.7e-29 132.1 271 34.3
BcaNung03452 Brassica carinata HOM05D005140 ORTHO05D006288 1.3e-28 131.7 255 34.9
Carub.0007s2375 Capsella rubella HOM05D005140 ORTHO05D006288 1.3e-28 131.7 255 35.3
ClCG09G012630 Citrullus lanatus HOM05D005140 ORTHO05D006288 1.7e-28 131.3 274 33.6
PGR031G2829 Punica granatum HOM05D005140 ORTHO05D006288 1.7e-28 131.3 279 33.7
arahy.Tifrunner.gnm1.ann1.FH98R9 Arachis hypogaea HOM05D005140 ORTHO05D006288 2.2e-28 131.0 273 34.1
arahy.Tifrunner.gnm1.ann1.W7TPG2 Arachis hypogaea HOM05D005140 ORTHO05D006288 2.2e-28 131.0 273 34.1
BcaNung00074 Brassica carinata HOM05D005140 ORTHO05D006288 2.2e-28 131.0 255 34.9
BcaNung06713 Brassica carinata HOM05D005140 ORTHO05D006288 2.2e-28 131.0 255 34.9
BraA01t00912Z Brassica rapa HOM05D005140 ORTHO05D006288 2.2e-28 131.0 255 35.3
CsaV3_3G049760 Cucumis sativus L. HOM05D005140 ORTHO05D006288 2.2e-28 131.0 274 33.6
Eucgr.D02138 Eucalyptus grandis HOM05D005140 ORTHO05D006288 2.2e-28 131.0 270 34.1
MD06G1045500 Malus domestica HOM05D005140 ORTHO05D006288 2.2e-28 131.0 274 33.2
Duzib068G0986 Durio zibethinus HOM05D005140 ORTHO05D006288 2.8e-28 130.6 270 33.3
Mapoly0062s0029 Marchantia polymorpha HOM05D005140 ORTHO05D006288 2.8e-28 130.6 273 32.2
CAN.G572.25 Capsicum annuum HOM05D005140 ORTHO05D006288 3.7e-28 130.2 270 34.4
Gorai.004G191200 Gossypium raimondii HOM05D005140 ORTHO05D006288 3.7e-28 130.2 275 34.2
Manes.01G182900 Manihot esculenta HOM05D005140 ORTHO05D006288 3.7e-28 130.2 275 34.5
Sp7g16510 Schrenkiella parvula HOM05D005140 ORTHO05D006288 3.7e-28 130.2 260 35.0
Thhalv10024864m.g Eutrema salsugineum HOM05D005140 ORTHO05D006288 4.8e-28 129.8 271 33.6
Sed0013740 Sechium edule HOM05D005140 ORTHO05D006288 4.8e-28 129.8 274 33.6
FvH4_5g20680 Fragaria vesca HOM05D005140 ORTHO05D006288 6.3e-28 129.4 269 32.3
FAN18G3556 Fragaria x ananassa HOM05D005140 ORTHO05D006288 6.3e-28 129.4 269 32.3
Thecc.03G238100 Theobroma cacao HOM05D005140 ORTHO05D006288 6.3e-28 129.4 270 33.0
unitig_699.g19774 Utricularia gibba HOM05D005140 ORTHO05D006288 6.3e-28 129.4 265 34.0
FAN04G2093 Fragaria x ananassa HOM05D005140 ORTHO05D006288 8.2e-28 129.0 269 32.3
FAN13G1317 Fragaria x ananassa HOM05D005140 ORTHO05D006288 8.2e-28 129.0 269 32.3
MD00G1132300 Malus domestica HOM05D005140 ORTHO05D006288 8.2e-28 129.0 269 32.7
RcHm_v2.0_Chr7g0206411 Rosa chinensis HOM05D005140 ORTHO05D006288 8.2e-28 129.0 269 33.1
COL.COLO4_06693 Corchorus olitorius HOM05D005140 ORTHO05D006288 1.1e-27 128.6 270 33.3
Lsat_1_v5_gn_6_94760 Lactuca sativa HOM05D005140 ORTHO05D006288 1.1e-27 128.6 270 33.0
FAN08G1378 Fragaria x ananassa HOM05D005140 ORTHO05D006288 1.4e-27 128.3 269 32.3
Gohir.D08G182300 Gossypium hirsutum HOM05D005140 ORTHO05D006288 1.4e-27 128.3 275 34.2
Rhsim07G0119600 Rhododendron simsii HOM05D005140 ORTHO05D006288 1.4e-27 128.3 270 33.3
HPP92_020526 Vanilla planifolia HOM05D005140 ORTHO05D006288 1.4e-27 128.3 266 32.7
Medtr5g013580 Medicago truncatula HOM05D005140 ORTHO05D006288 1.8e-27 127.9 270 33.3
SGA_v2.0_scaffold20G09272 Striga asiatica HOM05D005140 ORTHO05D006288 1.8e-27 127.9 285 33.7
Sed0020438 Sechium edule HOM05D005140 ORTHO05D006288 2.4e-27 127.5 269 33.1
Aqoxy3G02576 Aquilegia oxysepala HOM05D005140 ORTHO05D006288 3.1e-27 127.1 270 33.3
MSTRG.13768 Avicennia marina HOM05D005140 ORTHO05D006288 3.1e-27 127.1 270 32.6
EL10Ac5g12239 Beta vulgaris HOM05D005140 ORTHO05D006288 4.1e-27 126.7 270 33.3
Peaxi162Scf00301g01111 Petunia axillaris HOM05D005140 ORTHO05D006288 5.3e-27 126.3 277 33.6
Psat2g175480 Pisum sativum HOM05D005140 ORTHO05D006288 5.3e-27 126.3 270 33.0
HPP92_028085 Vanilla planifolia HOM05D005140 ORTHO05D006288 5.3e-27 126.3 257 33.1
Atru.chr9.1157 Acer truncatum HOM05D005140 ORTHO05D006288 7.0e-27 125.9 275 33.8
AUR62007191 Chenopodium quinoa HOM05D005140 ORTHO05D006288 7.0e-27 125.9 281 31.7
Potri.001G149900 Populus trichocarpa HOM05D005140 ORTHO05D006288 7.0e-27 125.9 269 32.7
Cc08_g11170 Coffea canephora HOM05D005140 ORTHO05D006288 9.1e-27 125.6 269 33.1
PSO063G3549 Papaver somniferum HOM05D005140 ORTHO05D006288 9.1e-27 125.6 270 32.6
TPR.G22969 Trifolium pratense HOM05D005140 ORTHO05D006288 9.1e-27 125.6 265 34.0
Ah.12g053860 Amaranthus hybridus HOM05D005140 ORTHO05D006288 1.2e-26 125.2 265 33.6
SMO259G0041 Selaginella moellendorffii HOM05D005140 ORTHO05D006288 1.2e-26 125.2 267 33.3
TAR636G3078 Trochodendron aralioides HOM05D005140 ORTHO05D006288 1.2e-26 125.2 270 33.0
PSO782G2508 Papaver somniferum HOM05D005140 ORTHO05D006288 1.6e-26 124.8 270 32.6
CiPaw.12G056200 Carya illinoinensis HOM05D005140 ORTHO05D006288 2.0e-26 124.4 270 32.6
MBI04_g38568_MAGBIO Magnolia biondii HOM05D005140 ORTHO05D006288 2.7e-26 124.0 270 33.0
Nn1g00730 Nelumbo nucifera HOM05D005140 ORTHO05D006288 2.7e-26 124.0 277 33.2
SGA_v2.0_scaffold6G03141 Striga asiatica HOM05D005140 ORTHO05D006288 2.7e-26 124.0 271 32.1
Nn6g33739 Nelumbo nucifera HOM05D005140 ORTHO05D006288 4.5e-26 123.2 269 32.7
Hund14471 Selenicereus undatus HOM05D005140 ORTHO05D006288 4.5e-26 123.2 265 33.2
vmacro23518 Vaccinium macrocarpon HOM05D005140 ORTHO05D006288 7.7e-26 122.5 269 32.7
THA.LOC104798349 Tarenaya hassleriana HOM05D005140 ORTHO05D006288 1.0e-25 122.1 271 33.9
Haze_08349 Corylus avellana HOM05D005140 ORTHO05D006288 1.3e-25 121.7 279 30.8
CANSAT21G2106 Cannabis sativa HOM05D005140 ORTHO05D006288 1.7e-25 121.3 259 33.2
AagrBONN_evm.TU.Sc2ySwM_344.2637 Anthoceros agrestis HOM05D005140 ORTHO05D006288 2.9e-25 120.6 283 32.5
Ciclev10019303m.g Citrus clementina HOM05D005140 ORTHO05D006288 2.9e-25 120.6 258 33.3
Lj9A525T29 Lonicera japonica HOM05D005140 ORTHO05D006288 2.9e-25 120.6 270 30.7
CDE04G2928 Ceratophyllum demersum HOM05D005140 ORTHO05D006288 6.5e-25 119.4 228 35.5
QL12p008469 Quercus lobata HOM05D005140 ORTHO05D006288 6.5e-25 119.4 270 33.3
Os05g0392100 Oryza sativa ssp. japonica HOM05D005140 ORTHO05D006288 8.5e-25 119.0 254 32.7
Pp3c10_5020 Physcomitrium patens HOM05D005140 ORTHO05D006288 1.1e-24 118.6 249 32.9
MBI04_g46822_MAGBIO Magnolia biondii HOM05D005140 ORTHO05D006288 2.5e-24 117.5 258 32.9
MCO13G373 Micromonas commoda HOM05D005140 ORTHO05D006288 2.1e-23 114.4 235 31.9
Aa31LG6G380 Aethionema arabicum HOM05D005140 ORTHO05D006288 6.1e-23 112.8 276 31.9
Sabra01G0119900 Salix brachista HOM05D005140 ORTHO05D006288 8.0e-23 112.5 278 31.3
Actinidia31490 Actinidia chinensis HOM05D005140 ORTHO05D006288 1.8e-22 111.3 182 38.5
VMungo0239G0001 Vigna mungo HOM05D005140 ORTHO05D006288 2.3e-22 110.9 267 33.3
Zm00001eb287280 Zea mays HOM05D005140 ORTHO05D006288 2.3e-22 110.9 224 33.0
A01p09690 Brassica napus HOM05D005140 ORTHO05D006288 5.2e-22 109.8 255 32.2
BcaC09g51625 Brassica carinata HOM05D005140 ORTHO05D006288 8.8e-22 109.0 255 32.2
CBR_g48842 Chara braunii HOM05D005140 ORTHO05D006288 4.4e-21 106.7 277 29.6
HPP92_022002 Vanilla planifolia HOM05D005140 ORTHO05D006288 5.7e-21 106.3 265 31.7
THA.LOC104814458 Tarenaya hassleriana HOM05D005140 ORTHO05D006288 9.8e-21 105.5 255 29.4
vmacro14121 Vaccinium macrocarpon HOM05D005140 ORTHO05D006288 1.3e-20 105.1 269 30.9
Dinv28888 Davidia involucrata HOM05D005140 ORTHO05D006288 2.8e-20 104.0 270 30.0
Nitab4.5_0012059g0010 Nicotiana tabacum HOM05D005140 ORTHO05D006288 8.3e-20 102.4 272 32.0
Dinv25152 Davidia involucrata HOM05D005140 ORTHO05D006288 3.1e-19 100.5 270 29.6
Nitab4.5_0004689g0020 Nicotiana tabacum HOM05D005140 ORTHO05D006288 3.5e-18 97.1 256 31.2
CDE12G0612 Ceratophyllum demersum HOM05D005140 ORTHO05D006288 7.7e-18 95.9 220 32.7
Sc01g0007900 Simmondsia chinensis HOM05D005140 ORTHO05D006288 1.0e-17 95.5 236 30.9
BolC1t01096H Brassica oleracea HOM05D005140 ORTHO05D006288 1.7e-17 94.7 153 39.9
Hma1.2p1_1672F.1_g296780 Hydrangea macrophylla HOM05D005140 ORTHO05D006288 1.7e-17 94.7 213 33.3
Aa31LG9G15140 Aethionema arabicum HOM05D005140 ORTHO05D006288 1.5e-16 91.7 270 25.9
Lj2C253G13 Lonicera japonica HOM05D005140 ORTHO05D006288 6.8e-14 82.8 158 32.9
Oeu017029.1 Olea europaea HOM05D005140 ORTHO05D006288 8.8e-14 82.4 128 39.1
Peaxi162Scf00715g00010 Petunia axillaris HOM05D005140 ORTHO05D006288 7.0e-11 72.8 176 32.4
Cfa024662 Carpinus fangiana HOM05D005140 ORTHO05D006288 1.2e-10 72.0 215 27.0
Cpa.g.sc98.58 Carica papaya HOM05D005140 ORTHO05D006288 1.1e-08 65.5 261 23.4
GSVIVG01013283001 Vitis vinifera HOM05D005140 ORTHO05D006288 9.5e-08 62.4 130 31.5


User provided reference genes

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