Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre05.g230800 Chlamydomonas reinhardtii HOM05D005545 ORTHO05D006917 0.0e+00 1888.6 1481 100.0
Lsat_1_v5_gn_1_115460 Lactuca sativa HOM05D005545 ORTHO05D006917 1.1e-21 110.5 200 33.0
Prupe.2G034500 Prunus persica HOM05D005545 ORTHO05D006917 1.1e-21 110.5 233 32.6
CBR_g54197 Chara braunii HOM05D005545 ORTHO05D006917 1.9e-21 109.8 199 37.7
Haze_03077 Corylus avellana HOM05D005545 ORTHO05D006917 1.9e-21 109.8 192 34.9
Hma1.2p1_2114F.1_g314270 Hydrangea macrophylla HOM05D005545 ORTHO05D006917 1.9e-21 109.8 191 34.6
Manes.04G160000 Manihot esculenta HOM05D005545 ORTHO05D006917 2.4e-21 109.4 201 34.8
Nn7g36650 Nelumbo nucifera HOM05D005545 ORTHO05D006917 7.1e-21 107.8 230 33.0
HPP92_001016 Vanilla planifolia HOM05D005545 ORTHO05D006917 1.2e-20 107.1 193 33.7
Actinidia10163 Actinidia chinensis HOM05D005545 ORTHO05D006917 1.6e-20 106.7 194 34.0
Thhalv10010067m.g Eutrema salsugineum HOM05D005545 ORTHO05D006917 1.6e-20 106.7 230 34.3
SMO351G0460 Selaginella moellendorffii HOM05D005545 ORTHO05D006917 1.6e-20 106.7 205 34.6
Cfa010879 Carpinus fangiana HOM05D005545 ORTHO05D006917 2.7e-20 105.9 191 34.6
CiPaw.13G013000 Carya illinoinensis HOM05D005545 ORTHO05D006917 2.7e-20 105.9 233 31.8
HanXRQChr11g0341811 Helianthus annuus HOM05D005545 ORTHO05D006917 2.7e-20 105.9 199 32.2
PSO384G2575 Papaver somniferum HOM05D005545 ORTHO05D006917 2.7e-20 105.9 227 32.6
GSVIVG01013494001 Vitis vinifera HOM05D005545 ORTHO05D006917 2.7e-20 105.9 232 31.9
ATR0745G085 Amborella trichopoda HOM05D005545 ORTHO05D006917 3.5e-20 105.5 200 35.0
CDE12G0276 Ceratophyllum demersum HOM05D005545 ORTHO05D006917 3.5e-20 105.5 197 36.0
Dinv32030 Davidia involucrata HOM05D005545 ORTHO05D006917 3.5e-20 105.5 227 32.2
A04p05370 Brassica napus HOM05D005545 ORTHO05D006917 4.6e-20 105.1 198 34.8
CAN.G1074.9 Capsicum annuum HOM05D005545 ORTHO05D006917 4.6e-20 105.1 232 33.2
Phvul.005G027400 Phaseolus vulgaris HOM05D005545 ORTHO05D006917 4.6e-20 105.1 198 33.3
Glyma.11G154800 Glycine max HOM05D005545 ORTHO05D006917 6.0e-20 104.8 199 34.2
Lalb_Chr04g0264091 Lupinus albus HOM05D005545 ORTHO05D006917 6.0e-20 104.8 200 34.0
Nn2g14866 Nelumbo nucifera HOM05D005545 ORTHO05D006917 7.8e-20 104.4 194 33.0
vmacro13750 Vaccinium macrocarpon HOM05D005545 ORTHO05D006917 7.8e-20 104.4 194 34.0
Rhsim07G0066900 Rhododendron simsii HOM05D005545 ORTHO05D006917 1.0e-19 104.0 194 35.1
TAR636G1823 Trochodendron aralioides HOM05D005545 ORTHO05D006917 1.0e-19 104.0 227 32.2
Ciclev10004162m.g Citrus clementina HOM05D005545 ORTHO05D006917 1.7e-19 103.2 191 34.0
BcaC02g09068 Brassica carinata HOM05D005545 ORTHO05D006917 2.3e-19 102.8 227 33.5
C04p38060 Brassica napus HOM05D005545 ORTHO05D006917 2.3e-19 102.8 227 33.5
BolC4t25380H Brassica oleracea HOM05D005545 ORTHO05D006917 2.3e-19 102.8 227 33.5
ClCG05G026770 Citrullus lanatus HOM05D005545 ORTHO05D006917 2.3e-19 102.8 189 32.8
MD07G1038300 Malus domestica HOM05D005545 ORTHO05D006917 2.3e-19 102.8 233 31.8
EL10Ac2g02815 Beta vulgaris HOM05D005545 ORTHO05D006917 3.0e-19 102.4 189 32.8
BraA04t16237Z Brassica rapa HOM05D005545 ORTHO05D006917 3.0e-19 102.4 198 34.3
MD02G1288500 Malus domestica HOM05D005545 ORTHO05D006917 3.0e-19 102.4 233 32.2
VMungo1080G1426 Vigna mungo HOM05D005545 ORTHO05D006917 3.0e-19 102.4 201 32.8
Ah.12g062880 Amaranthus hybridus HOM05D005545 ORTHO05D006917 3.9e-19 102.1 196 32.1
Os01g0952200 Oryza sativa ssp. japonica HOM05D005545 ORTHO05D006917 3.9e-19 102.1 198 34.3
Aqoxy2G00348 Aquilegia oxysepala HOM05D005545 ORTHO05D006917 5.1e-19 101.7 194 34.5
CsaV3_5G036710 Cucumis sativus L. HOM05D005545 ORTHO05D006917 5.1e-19 101.7 189 33.3
Solyc11g005250.3 Solanum lycopersicum HOM05D005545 ORTHO05D006917 5.1e-19 101.7 232 32.8
Sopen11g001260 Solanum pennellii HOM05D005545 ORTHO05D006917 5.1e-19 101.7 232 32.8
Cc00_g05310 Coffea canephora HOM05D005545 ORTHO05D006917 6.6e-19 101.3 200 32.0
Medtr3g017390 Medicago truncatula HOM05D005545 ORTHO05D006917 6.6e-19 101.3 192 32.8
RcHm_v2.0_Chr1g0323901 Rosa chinensis HOM05D005545 ORTHO05D006917 6.6e-19 101.3 233 31.3
Hund15735 Selenicereus undatus HOM05D005545 ORTHO05D006917 6.6e-19 101.3 189 32.8
BcaB02g08489 Brassica carinata HOM05D005545 ORTHO05D006917 8.6e-19 100.9 186 34.4
PGR044G1070 Punica granatum HOM05D005545 ORTHO05D006917 8.6e-19 100.9 218 33.9
Sp5g07960 Schrenkiella parvula HOM05D005545 ORTHO05D006917 8.6e-19 100.9 230 32.6
AUR62037185 Chenopodium quinoa HOM05D005545 ORTHO05D006917 1.1e-18 100.5 195 30.3
Lj3g0017403 Lotus japonicus HOM05D005545 ORTHO05D006917 1.5e-18 100.1 199 31.7
Potri.003G197701 Populus trichocarpa HOM05D005545 ORTHO05D006917 1.5e-18 100.1 190 33.2
Potri.T125006 Populus trichocarpa HOM05D005545 ORTHO05D006917 1.5e-18 100.1 190 33.2
THA.LOC104824192 Tarenaya hassleriana HOM05D005545 ORTHO05D006917 1.5e-18 100.1 198 32.3
Aa31sc35G110 Aethionema arabicum HOM05D005545 ORTHO05D006917 1.9e-18 99.8 198 35.4
Psat5g217720 Pisum sativum HOM05D005545 ORTHO05D006917 1.9e-18 99.8 191 33.0
QL04p014793 Quercus lobata HOM05D005545 ORTHO05D006917 1.9e-18 99.8 212 31.6
FAN03G2070 Fragaria x ananassa HOM05D005545 ORTHO05D006917 2.5e-18 99.4 233 30.9
Glyma.04G138300 Glycine max HOM05D005545 ORTHO05D006917 2.5e-18 99.4 200 32.5
QL04p018188 Quercus lobata HOM05D005545 ORTHO05D006917 2.5e-18 99.4 212 31.6
MELO3C012467.2 Cucumis melo HOM05D005545 ORTHO05D006917 3.3e-18 99.0 189 32.3
AUR62026877 Chenopodium quinoa HOM05D005545 ORTHO05D006917 4.3e-18 98.6 195 30.3
SGA_v2.0_scaffold319G48544 Striga asiatica HOM05D005545 ORTHO05D006917 4.3e-18 98.6 198 33.8
arahy.Tifrunner.gnm1.ann1.598UNF Arachis hypogaea HOM05D005545 ORTHO05D006917 5.6e-18 98.2 197 31.5
arahy.Tifrunner.gnm1.ann1.HR7PRR Arachis hypogaea HOM05D005545 ORTHO05D006917 5.6e-18 98.2 204 30.9
Sc10g0004410 Simmondsia chinensis HOM05D005545 ORTHO05D006917 5.6e-18 98.2 230 32.2
Zm00001eb140820 Zea mays HOM05D005545 ORTHO05D006917 5.6e-18 98.2 200 32.5
Ca_19084_v3 Cicer arietinum L. HOM05D005545 ORTHO05D006917 7.3e-18 97.8 198 32.3
FAN06G4324 Fragaria x ananassa HOM05D005545 ORTHO05D006917 7.3e-18 97.8 232 31.5
FvH4_7g02950 Fragaria vesca HOM05D005545 ORTHO05D006917 9.5e-18 97.4 191 34.0
CSS0046105 Camellia sinensis var. sinensis HOM05D005545 ORTHO05D006917 1.2e-17 97.1 230 31.3
Thecc.10G162000 Theobroma cacao HOM05D005545 ORTHO05D006917 1.2e-17 97.1 200 32.5
TWI63G0062 Tripterygium wilfordii HOM05D005545 ORTHO05D006917 1.2e-17 97.1 191 33.0
Sabra03G0147100 Salix brachista HOM05D005545 ORTHO05D006917 1.6e-17 96.7 190 33.2
AL5G35510 Arabidopsis lyrata HOM05D005545 ORTHO05D006917 2.8e-17 95.9 226 31.0
CSS0017863 Camellia sinensis var. sinensis HOM05D005545 ORTHO05D006917 2.8e-17 95.9 230 31.3
Duzib114G0439 Durio zibethinus HOM05D005545 ORTHO05D006917 2.8e-17 95.9 191 33.0
COL.COLO4_21694 Corchorus olitorius HOM05D005545 ORTHO05D006917 3.6e-17 95.5 200 33.0
Peaxi162Scf00025g01520 Petunia axillaris HOM05D005545 ORTHO05D006917 3.6e-17 95.5 232 31.5
Sed0011144 Sechium edule HOM05D005545 ORTHO05D006917 3.6e-17 95.5 208 30.8
DCAR_003247 Daucus carota HOM05D005545 ORTHO05D006917 4.7e-17 95.1 207 31.9
ECA248G0597 Erigeron canadensis HOM05D005545 ORTHO05D006917 4.7e-17 95.1 252 27.8
CARHR164360 Cardamine hirsuta HOM05D005545 ORTHO05D006917 6.2e-17 94.7 198 32.8
SGA_v2.0_scaffold124G33619 Striga asiatica HOM05D005545 ORTHO05D006917 6.2e-17 94.7 200 32.5
AT3G54460 Arabidopsis thaliana HOM05D005545 ORTHO05D006917 1.4e-16 93.6 230 30.9
Lj9A655T39 Lonicera japonica HOM05D005545 ORTHO05D006917 1.4e-16 93.6 191 33.0
PRCOL_00000400 Prasinoderma coloniale HOM05D005545 ORTHO05D006917 1.8e-16 93.2 203 34.0
Atru.chr12.1348 Acer truncatum HOM05D005545 ORTHO05D006917 2.3e-16 92.8 232 29.7
Carub.0005s2108 Capsella rubella HOM05D005545 ORTHO05D006917 2.3e-16 92.8 189 31.2
Gohir.A05G400900 Gossypium hirsutum HOM05D005545 ORTHO05D006917 3.1e-16 92.4 200 33.0
Gohir.D04G014900 Gossypium hirsutum HOM05D005545 ORTHO05D006917 3.1e-16 92.4 191 33.0
Gorai.012G017400 Gossypium raimondii HOM05D005545 ORTHO05D006917 3.1e-16 92.4 191 33.0
Mapoly0059s0106 Marchantia polymorpha HOM05D005545 ORTHO05D006917 6.8e-16 91.3 198 32.3
SalBow5G5421 Salvia bowleyana HOM05D005545 ORTHO05D006917 6.8e-16 91.3 240 30.8
TPR.G17827 Trifolium pratense HOM05D005545 ORTHO05D006917 8.9e-16 90.9 197 33.0
MSTRG.20517 Avicennia marina HOM05D005545 ORTHO05D006917 2.6e-15 89.4 199 33.7
Migut.B01225 Erythranthe guttata HOM05D005545 ORTHO05D006917 2.6e-15 89.4 306 24.8
Oeu040901.1 Olea europaea HOM05D005545 ORTHO05D006917 2.6e-15 89.4 200 30.5
unitig_749.g13482 Utricularia gibba HOM05D005545 ORTHO05D006917 2.6e-15 89.4 211 32.2
arahy.Tifrunner.gnm1.ann1.3MZP5F Arachis hypogaea HOM05D005545 ORTHO05D006917 2.2e-14 86.3 197 28.9
CANSAT56G1029 Cannabis sativa HOM05D005545 ORTHO05D006917 6.4e-14 84.7 192 30.7
Pp3c16_14340 Physcomitrium patens HOM05D005545 ORTHO05D006917 1.1e-13 84.0 99 43.4
Cpa.g.sc997.1 Carica papaya HOM05D005545 ORTHO05D006917 1.6e-12 80.1 178 32.0
Eucgr.J01185 Eucalyptus grandis HOM05D005545 ORTHO05D006917 1.6e-12 80.1 85 43.5
MCO04G441 Micromonas commoda HOM05D005545 ORTHO05D006917 6.6e-11 74.7 172 32.0
Actinidia06243 Actinidia chinensis HOM05D005545 ORTHO05D006917 2.4e-08 66.2 116 33.6


User provided reference genes

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