Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre01.g032100 Chlamydomonas reinhardtii HOM05D006776 ORTHO05D007603 2.0e-167 592.4 313 100.0
Mapoly0043s0035 Marchantia polymorpha HOM05D006776 ORTHO05D007603 6.9e-43 178.7 296 37.5
AagrBONN_evm.TU.Sc2ySwM_228.2971 Anthoceros agrestis HOM05D006776 ORTHO05D007603 1.2e-42 177.9 296 37.5
ATR0820G216 Amborella trichopoda HOM05D006776 ORTHO05D007603 3.4e-42 176.4 280 37.9
Pp3c22_5850 Physcomitrium patens HOM05D006776 ORTHO05D007603 3.4e-42 176.4 278 38.5
PSO017G0681 Papaver somniferum HOM05D006776 ORTHO05D007603 6.4e-41 172.2 279 37.3
HPP92_001976 Vanilla planifolia HOM05D006776 ORTHO05D007603 6.4e-41 172.2 277 38.3
PSO170G0170 Papaver somniferum HOM05D006776 ORTHO05D007603 8.4e-41 171.8 279 37.3
Aqoxy5G00870 Aquilegia oxysepala HOM05D006776 ORTHO05D007603 1.1e-40 171.4 304 36.8
ECA232G1156 Erigeron canadensis HOM05D006776 ORTHO05D007603 3.2e-40 169.9 274 37.6
PGSC0003DMG400011544 Solanum tuberosum HOM05D006776 ORTHO05D007603 5.4e-40 169.1 293 34.8
MSTRG.22221 Avicennia marina HOM05D006776 ORTHO05D007603 9.3e-40 168.3 288 35.8
Phvul.009G071700 Phaseolus vulgaris HOM05D006776 ORTHO05D007603 1.2e-39 167.9 292 36.0
Hund23872 Selenicereus undatus HOM05D006776 ORTHO05D007603 2.1e-39 167.2 293 36.5
CSS0038791 Camellia sinensis var. sinensis HOM05D006776 ORTHO05D007603 2.7e-39 166.8 305 35.1
HanXRQChr09g0266761 Helianthus annuus HOM05D006776 ORTHO05D007603 3.5e-39 166.4 282 36.9
SMO203G0215 Selaginella moellendorffii HOM05D006776 ORTHO05D007603 3.5e-39 166.4 275 38.5
VMungo1309G0963 Vigna mungo HOM05D006776 ORTHO05D007603 4.6e-39 166.0 291 36.4
Lsat_1_v5_gn_4_131640 Lactuca sativa HOM05D006776 ORTHO05D007603 6.0e-39 165.6 290 34.5
Nitab4.5_0008551g0030 Nicotiana tabacum HOM05D006776 ORTHO05D007603 1.0e-38 164.9 290 35.9
TPR.G33723 Trifolium pratense HOM05D006776 ORTHO05D007603 1.0e-38 164.9 288 35.8
Oeu053611.1 Olea europaea HOM05D006776 ORTHO05D007603 1.3e-38 164.5 284 36.3
Sopen12g030330 Solanum pennellii HOM05D006776 ORTHO05D007603 1.8e-38 164.1 295 34.2
Migut.N02781 Erythranthe guttata HOM05D006776 ORTHO05D007603 2.3e-38 163.7 286 36.4
Glyma.04G045700 Glycine max HOM05D006776 ORTHO05D007603 2.3e-38 163.7 290 35.9
Manes.05G181900 Manihot esculenta HOM05D006776 ORTHO05D007603 2.3e-38 163.7 301 35.5
Psat5g038960 Pisum sativum HOM05D006776 ORTHO05D007603 2.3e-38 163.7 291 36.4
Rhsim07G0219900 Rhododendron simsii HOM05D006776 ORTHO05D007603 2.3e-38 163.7 291 35.1
Actinidia08248 Actinidia chinensis HOM05D006776 ORTHO05D007603 3.0e-38 163.3 284 36.6
Gohir.A05G210000 Gossypium hirsutum HOM05D006776 ORTHO05D007603 3.0e-38 163.3 291 37.8
TAR376G1186 Trochodendron aralioides HOM05D006776 ORTHO05D007603 3.9e-38 162.9 291 35.7
unitig_578.g16149 Utricularia gibba HOM05D006776 ORTHO05D007603 3.9e-38 162.9 303 35.6
GSVIVG01009344001 Vitis vinifera HOM05D006776 ORTHO05D007603 3.9e-38 162.9 287 35.2
Solyc12g088340.2 Solanum lycopersicum HOM05D006776 ORTHO05D007603 5.1e-38 162.5 295 34.2
Zm00001eb147340 Zea mays HOM05D006776 ORTHO05D007603 5.1e-38 162.5 276 36.2
CDE04G2973 Ceratophyllum demersum HOM05D006776 ORTHO05D007603 6.7e-38 162.2 284 35.6
Cc10_g05780 Coffea canephora HOM05D006776 ORTHO05D007603 6.7e-38 162.2 293 34.1
Medtr3g103170 Medicago truncatula HOM05D006776 ORTHO05D007603 6.7e-38 162.2 293 36.2
Nitab4.5_0002314g0100 Nicotiana tabacum HOM05D006776 ORTHO05D007603 8.7e-38 161.8 290 34.8
ClCG08G016470 Citrullus lanatus HOM05D006776 ORTHO05D007603 1.1e-37 161.4 287 35.5
PGR083G0271 Punica granatum HOM05D006776 ORTHO05D007603 1.1e-37 161.4 290 34.1
SGA_v2.0_scaffold152G36804 Striga asiatica HOM05D006776 ORTHO05D007603 1.1e-37 161.4 305 32.1
COL.COLO4_28506 Corchorus olitorius HOM05D006776 ORTHO05D007603 1.5e-37 161.0 296 35.8
MD15G1070100 Malus domestica HOM05D006776 ORTHO05D007603 1.5e-37 161.0 301 36.2
Nn1g04555 Nelumbo nucifera HOM05D006776 ORTHO05D007603 1.5e-37 161.0 280 35.4
Atru.chr13.832 Acer truncatum HOM05D006776 ORTHO05D007603 1.9e-37 160.6 290 35.5
EL10Ac1g02384 Beta vulgaris HOM05D006776 ORTHO05D007603 1.9e-37 160.6 294 32.7
CiPaw.07G175000 Carya illinoinensis HOM05D006776 ORTHO05D007603 1.9e-37 160.6 289 35.3
Glyma.06G046400 Glycine max HOM05D006776 ORTHO05D007603 1.9e-37 160.6 294 36.1
Prupe.1G422900 Prunus persica HOM05D006776 ORTHO05D007603 1.9e-37 160.6 304 34.5
Thecc.08G088800 Theobroma cacao HOM05D006776 ORTHO05D007603 1.9e-37 160.6 296 35.8
Sp1g24040 Schrenkiella parvula HOM05D006776 ORTHO05D007603 2.5e-37 160.2 299 34.4
Sc15g0005690 Simmondsia chinensis HOM05D006776 ORTHO05D007603 2.5e-37 160.2 285 34.0
Dinv39223 Davidia involucrata HOM05D006776 ORTHO05D007603 3.3e-37 159.8 306 33.3
Ah.11g042830 Amaranthus hybridus HOM05D006776 ORTHO05D007603 4.3e-37 159.5 299 35.1
CBR_g4873 Chara braunii HOM05D006776 ORTHO05D007603 4.3e-37 159.5 361 31.0
Hma1.2p1_0819F.1_g223710 Hydrangea macrophylla HOM05D006776 ORTHO05D007603 4.3e-37 159.5 282 34.8
CsaV3_2G026140 Cucumis sativus L. HOM05D006776 ORTHO05D007603 5.6e-37 159.1 293 35.2
BcaNung06155 Brassica carinata HOM05D006776 ORTHO05D007603 7.4e-37 158.7 294 35.4
RcHm_v2.0_Chr6g0309581 Rosa chinensis HOM05D006776 ORTHO05D007603 7.4e-37 158.7 300 34.3
AL1G41330 Arabidopsis lyrata HOM05D006776 ORTHO05D007603 9.6e-37 158.3 297 36.0
Cpa.g.sc142.25 Carica papaya HOM05D006776 ORTHO05D007603 9.6e-37 158.3 296 34.8
CANSAT21G2159 Cannabis sativa HOM05D006776 ORTHO05D007603 1.3e-36 157.9 297 35.0
Eucgr.F00083 Eucalyptus grandis HOM05D006776 ORTHO05D007603 1.3e-36 157.9 292 34.6
FAN15G0723 Fragaria x ananassa HOM05D006776 ORTHO05D007603 1.3e-36 157.9 308 34.1
Gohir.D05G213300 Gossypium hirsutum HOM05D006776 ORTHO05D007603 1.3e-36 157.9 291 36.8
Lalb_Chr11g0062871 Lupinus albus HOM05D006776 ORTHO05D007603 1.3e-36 157.9 291 34.7
FAN20G0940 Fragaria x ananassa HOM05D006776 ORTHO05D007603 1.6e-36 157.5 303 34.0
FvH4_2g33100 Fragaria vesca HOM05D006776 ORTHO05D007603 2.1e-36 157.1 309 34.6
FAN24G3456 Fragaria x ananassa HOM05D006776 ORTHO05D007603 2.1e-36 157.1 304 34.5
Sed0026542 Sechium edule HOM05D006776 ORTHO05D007603 2.8e-36 156.8 281 34.2
A09p38320 Brassica napus HOM05D006776 ORTHO05D007603 3.7e-36 156.4 294 34.7
Ciclev10001152m.g Citrus clementina HOM05D006776 ORTHO05D007603 3.7e-36 156.4 286 35.3
BraA09t39342Z Brassica rapa HOM05D006776 ORTHO05D007603 8.1e-36 155.2 287 35.9
MELO3C010806.2 Cucumis melo HOM05D006776 ORTHO05D007603 8.1e-36 155.2 304 34.9
Ca_15900_v3 Cicer arietinum L. HOM05D006776 ORTHO05D007603 1.1e-35 154.8 290 35.5
Haze_22436 Corylus avellana HOM05D006776 ORTHO05D007603 1.1e-35 154.8 298 34.9
FAN27G1522 Fragaria x ananassa HOM05D006776 ORTHO05D007603 1.1e-35 154.8 296 34.1
AT1G27840 Arabidopsis thaliana HOM05D006776 ORTHO05D007603 1.4e-35 154.5 295 35.3
C05p26470 Brassica napus HOM05D006776 ORTHO05D007603 1.4e-35 154.5 283 35.0
AUR62038776 Chenopodium quinoa HOM05D006776 ORTHO05D007603 2.4e-35 153.7 279 33.3
CARHR027300 Cardamine hirsuta HOM05D006776 ORTHO05D007603 4.0e-35 152.9 297 35.4
DCAR_012816 Daucus carota HOM05D006776 ORTHO05D007603 4.0e-35 152.9 284 34.9
arahy.Tifrunner.gnm1.ann1.SBJ000 Arachis hypogaea HOM05D006776 ORTHO05D007603 5.3e-35 152.5 306 33.7
arahy.Tifrunner.gnm1.ann1.YEFH3D Arachis hypogaea HOM05D006776 ORTHO05D007603 6.9e-35 152.1 305 32.8
Lj1g0026753 Lotus japonicus HOM05D006776 ORTHO05D007603 6.9e-35 152.1 290 34.5
Potri.014G016100 Populus trichocarpa HOM05D006776 ORTHO05D007603 6.9e-35 152.1 290 34.8
AUR62037473 Chenopodium quinoa HOM05D006776 ORTHO05D007603 9.0e-35 151.8 279 33.0
THA.LOC104814190 Tarenaya hassleriana HOM05D006776 ORTHO05D007603 9.0e-35 151.8 287 33.8
Peaxi162Scf00160g00527 Petunia axillaris HOM05D006776 ORTHO05D007603 1.5e-34 151.0 280 35.0
BolC5t31368H Brassica oleracea HOM05D006776 ORTHO05D007603 2.6e-34 150.2 283 35.7
Carub.0001s2630 Capsella rubella HOM05D006776 ORTHO05D007603 2.6e-34 150.2 297 34.7
TWI56G0429 Tripterygium wilfordii HOM05D006776 ORTHO05D007603 1.7e-33 147.5 279 35.5
vmacro22055 Vaccinium macrocarpon HOM05D006776 ORTHO05D007603 6.4e-33 145.6 300 31.7
AT1G19750 Arabidopsis thaliana HOM05D006776 ORTHO05D007603 8.4e-33 145.2 295 34.6
Lj4A758G74 Lonicera japonica HOM05D006776 ORTHO05D007603 1.4e-32 144.4 266 33.1
QL12p038088 Quercus lobata HOM05D006776 ORTHO05D007603 7.1e-32 142.1 341 30.5
Sabra14G0010000 Salix brachista HOM05D006776 ORTHO05D007603 9.3e-32 141.7 271 34.3
Aa31sc113G60 Aethionema arabicum HOM05D006776 ORTHO05D007603 1.8e-30 137.5 304 32.2
Thhalv10007615m.g Eutrema salsugineum HOM05D006776 ORTHO05D007603 1.8e-30 137.5 264 35.2
Cfa013778 Carpinus fangiana HOM05D006776 ORTHO05D007603 2.3e-30 137.1 298 31.2
Gorai.009G219900 Gossypium raimondii HOM05D006776 ORTHO05D007603 1.1e-29 134.8 272 36.0
MCO02G266 Micromonas commoda HOM05D006776 ORTHO05D007603 1.5e-29 134.4 285 33.3
SMO353G0131 Selaginella moellendorffii HOM05D006776 ORTHO05D007603 6.2e-28 129.0 274 33.9
BcaNung06153 Brassica carinata HOM05D006776 ORTHO05D007603 9.0e-27 125.2 277 32.1
Duzib116G0586 Durio zibethinus HOM05D006776 ORTHO05D007603 2.6e-26 123.6 229 36.2
Hma1.2p1_0819F.1_g223700 Hydrangea macrophylla HOM05D006776 ORTHO05D007603 1.0e-25 121.7 240 32.9
SEGI_36074 Sequoiadendron giganteum HOM05D006776 ORTHO05D007603 9.3e-24 115.2 218 33.5
PRCOL_00002749 Prasinoderma coloniale HOM05D006776 ORTHO05D007603 3.5e-23 113.2 277 29.6
MD08G1082700 Malus domestica HOM05D006776 ORTHO05D007603 3.7e-20 103.2 281 29.5
MD08G1084000 Malus domestica HOM05D006776 ORTHO05D007603 4.2e-16 89.7 239 29.7
CDE02G3909 Ceratophyllum demersum HOM05D006776 ORTHO05D007603 7.9e-15 85.5 274 22.6
BcaC05g26777 Brassica carinata HOM05D006776 ORTHO05D007603 2.3e-14 84.0 288 29.9


User provided reference genes

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