Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc85.25 Carica papaya HOM05D003161 ORTHO05D119738 1.5e-66 256.1 140 100.0
CANSAT64G2741 Cannabis sativa HOM05D003161 ORTHO05D005173 3.5e-31 138.7 139 56.8
Duzib128G1871 Durio zibethinus HOM05D003161 ORTHO05D005173 5.1e-30 134.8 140 59.3
Manes.09G040300 Manihot esculenta HOM05D003161 ORTHO05D005173 6.7e-30 134.4 142 57.7
Prupe.7G085700 Prunus persica HOM05D003161 ORTHO05D005173 7.4e-29 131.0 138 55.1
Thecc.05G180200 Theobroma cacao HOM05D003161 ORTHO05D005173 9.6e-29 130.6 140 57.1
MD12G1051100 Malus domestica HOM05D003161 ORTHO05D005173 3.6e-28 128.6 141 56.7
FAN05G0820 Fragaria x ananassa HOM05D003161 ORTHO05D005173 6.9e-27 124.4 130 57.7
FAN05G2723 Fragaria x ananassa HOM05D003161 ORTHO05D005173 6.9e-27 124.4 130 57.7
FAN14G4107 Fragaria x ananassa HOM05D003161 ORTHO05D005173 6.9e-27 124.4 130 57.7
FvH4_6g21470 Fragaria vesca HOM05D003161 ORTHO05D005173 9.0e-27 124.0 130 57.7
FAN09G2861 Fragaria x ananassa HOM05D003161 ORTHO05D005173 1.2e-26 123.6 130 57.7
Eucgr.A02507 Eucalyptus grandis HOM05D003161 ORTHO05D005173 2.0e-26 122.9 136 52.9
FAN02G0008 Fragaria x ananassa HOM05D003161 ORTHO05D005173 2.0e-26 122.9 130 57.7
Actinidia38605 Actinidia chinensis HOM05D003161 ORTHO05D005173 9.9e-26 120.6 140 52.9
GSVIVG01033430001 Vitis vinifera HOM05D003161 ORTHO05D005173 2.2e-25 119.4 140 54.3
QL07p025506 Quercus lobata HOM05D003161 ORTHO05D005173 2.9e-25 119.0 120 61.7
TWI53G1521 Tripterygium wilfordii HOM05D003161 ORTHO05D005173 1.4e-24 116.7 140 52.9
TAR633G1132 Trochodendron aralioides HOM05D003161 ORTHO05D005173 2.4e-24 115.9 131 53.4
Peaxi162Scf00045g00223 Petunia axillaris HOM05D003161 ORTHO05D005173 4.6e-23 111.7 141 56.0
CAN.G479.45 Capsicum annuum HOM05D003161 ORTHO05D005173 1.0e-22 110.5 98 57.1
Lj2C361G9 Lonicera japonica HOM05D003161 ORTHO05D005173 1.8e-22 109.8 140 52.9
Cc06_g23250 Coffea canephora HOM05D003161 ORTHO05D005173 3.0e-22 109.0 153 47.7
Sabra16G0064500 Salix brachista HOM05D003161 ORTHO05D005173 6.7e-22 107.8 139 51.8
Sopen03g011350 Solanum pennellii HOM05D003161 ORTHO05D005173 6.7e-22 107.8 96 60.4
Gohir.A09G130300 Gossypium hirsutum HOM05D003161 ORTHO05D005173 8.7e-22 107.5 138 57.2
Gohir.D09G126300 Gossypium hirsutum HOM05D003161 ORTHO05D005173 8.7e-22 107.5 138 57.2
Gorai.006G145100 Gossypium raimondii HOM05D003161 ORTHO05D005173 8.7e-22 107.5 138 57.2
Atru.chr8.1220 Acer truncatum HOM05D003161 ORTHO05D005173 1.1e-21 107.1 141 49.6
Solyc03g051900.4 Solanum lycopersicum HOM05D003161 ORTHO05D005173 1.1e-21 107.1 107 56.1
THA.LOC104826779 Tarenaya hassleriana HOM05D003161 ORTHO05D005173 2.5e-21 105.9 140 46.4
Aqoxy2G02393 Aquilegia oxysepala HOM05D003161 ORTHO05D005173 3.3e-21 105.5 121 51.2
vmacro22129 Vaccinium macrocarpon HOM05D003161 ORTHO05D015567 4.3e-21 105.1 140 50.0
Sc19g0006250 Simmondsia chinensis HOM05D003161 ORTHO05D005173 5.6e-21 104.8 135 48.9
Sp3g10190 Schrenkiella parvula HOM05D003161 ORTHO05D005173 7.4e-21 104.4 127 49.6
Oeu046733.1 Olea europaea HOM05D003161 ORTHO05D005173 9.6e-21 104.0 88 63.6
DCAR_016871 Daucus carota HOM05D003161 ORTHO05D005173 1.3e-20 103.6 135 48.1
Potri.016G062600 Populus trichocarpa HOM05D003161 ORTHO05D005173 1.6e-20 103.2 150 46.0
EL10Ac7g16694 Beta vulgaris HOM05D003161 ORTHO05D005173 3.7e-20 102.1 132 50.8
Aa31sc238G10 Aethionema arabicum HOM05D003161 ORTHO05D005173 8.1e-20 100.9 128 50.8
C05p55950 Brassica napus HOM05D003161 ORTHO05D005173 1.1e-19 100.5 128 50.0
BolC5t34262H Brassica oleracea HOM05D003161 ORTHO05D005173 1.1e-19 100.5 128 50.0
AUR62026957 Chenopodium quinoa HOM05D003161 ORTHO05D005173 1.1e-19 100.5 120 50.8
SalBow1G2678 Salvia bowleyana HOM05D003161 ORTHO05D005173 1.4e-19 100.1 103 53.4
COL.COLO4_29434 Corchorus olitorius HOM05D003161 ORTHO05D005173 1.8e-19 99.8 139 54.7
Migut.K00013 Erythranthe guttata HOM05D003161 ORTHO05D005173 1.8e-19 99.8 141 49.6
Ah.15g091410 Amaranthus hybridus HOM05D003161 ORTHO05D005173 2.4e-19 99.4 124 47.6
BolC1t05277H Brassica oleracea HOM05D003161 ORTHO05D005173 4.0e-19 98.6 129 47.3
RcHm_v2.0_Chr3g0478661 Rosa chinensis HOM05D003161 ORTHO05D005173 6.9e-19 97.8 132 50.0
Ciclev10013867m.g Citrus clementina HOM05D003161 ORTHO05D005173 9.0e-19 97.4 103 63.1
BraA01t04149Z Brassica rapa HOM05D003161 ORTHO05D005173 2.0e-18 96.3 129 46.5
Thhalv10019877m.g Eutrema salsugineum HOM05D003161 ORTHO05D005173 2.0e-18 96.3 127 47.2
CsaV3_4G031200 Cucumis sativus L. HOM05D003161 ORTHO05D005173 2.6e-18 95.9 139 42.4
CDE02G0114 Ceratophyllum demersum HOM05D003161 ORTHO05D005173 3.4e-18 95.5 122 50.8
CARHR086520 Cardamine hirsuta HOM05D003161 ORTHO05D005173 4.5e-18 95.1 139 45.3
TWI74G0321 Tripterygium wilfordii HOM05D003161 ORTHO05D005173 4.5e-18 95.1 140 49.3
AT3G11964 Arabidopsis thaliana HOM05D003161 ORTHO05D005173 5.8e-18 94.7 127 45.7
CiPaw.08G134900 Carya illinoinensis HOM05D003161 ORTHO05D005173 5.8e-18 94.7 129 53.5
A05p37390 Brassica napus HOM05D003161 ORTHO05D005173 1.3e-17 93.6 128 49.2
BraA05t22538Z Brassica rapa HOM05D003161 ORTHO05D005173 1.3e-17 93.6 128 49.2
MELO3C008994.2 Cucumis melo HOM05D003161 ORTHO05D005173 1.3e-17 93.6 139 41.0
PGR004G2129 Punica granatum HOM05D003161 ORTHO05D005173 1.3e-17 93.6 125 49.6
BcaB04g21101 Brassica carinata HOM05D003161 ORTHO05D005173 1.7e-17 93.2 129 45.7
Carub.0003s1130 Capsella rubella HOM05D003161 ORTHO05D005173 2.2e-17 92.8 124 47.6
Nitab4.5_0001364g0080 Nicotiana tabacum HOM05D003161 ORTHO05D015567 2.2e-17 92.8 139 51.8
ECA238G1915 Erigeron canadensis HOM05D003161 ORTHO05D005173 3.8e-17 92.0 127 48.0
CSS0010787 Camellia sinensis var. sinensis HOM05D003161 ORTHO05D005173 4.9e-17 91.7 145 46.9
Nitab4.5_0000571g0080 Nicotiana tabacum HOM05D003161 ORTHO05D015567 6.5e-17 91.3 140 51.4
Sed0016761 Sechium edule HOM05D003161 ORTHO05D005173 8.4e-17 90.9 136 40.4
CSS0043330 Camellia sinensis var. sinensis HOM05D003161 ORTHO05D005173 3.2e-16 89.0 149 45.0
MSTRG.26730 Avicennia marina HOM05D003161 ORTHO05D005173 4.2e-16 88.6 98 52.0
Lsat_1_v5_gn_2_58000 Lactuca sativa HOM05D003161 ORTHO05D005173 5.5e-16 88.2 96 51.0
AL3G23570 Arabidopsis lyrata HOM05D003161 ORTHO05D005173 1.2e-15 87.0 127 44.9
PSO339G0479 Papaver somniferum HOM05D003161 ORTHO05D005173 1.6e-15 86.7 129 52.7
PSO384G1659 Papaver somniferum HOM05D003161 ORTHO05D005173 1.6e-15 86.7 129 52.7
TWI74G1605 Tripterygium wilfordii HOM05D003161 ORTHO05D005173 2.7e-15 85.9 96 54.2
Hund19220 Selenicereus undatus HOM05D003161 ORTHO05D005173 3.5e-15 85.5 134 43.3
Dinv25021 Davidia involucrata HOM05D003161 ORTHO05D005173 1.1e-13 80.5 85 57.6
SGA_v2.0_scaffold274G46506 Striga asiatica HOM05D003161 ORTHO05D005173 7.4e-13 77.8 140 42.9
Cfa020115 Carpinus fangiana HOM05D003161 ORTHO05D005173 2.1e-12 76.3 129 43.4
Glyma.02G168900 Glycine max HOM05D003161 ORTHO05D005173 2.4e-11 72.8 143 40.6
ATR0737G016 Amborella trichopoda HOM05D003161 ORTHO05D005173 1.2e-10 70.5 111 39.6
Glyma.09G104000 Glycine max HOM05D003161 ORTHO05D005173 2.0e-10 69.7 145 40.0
Lj5g0006535 Lotus japonicus HOM05D003161 ORTHO05D005173 5.9e-10 68.2 114 43.0
Psat6g109960 Pisum sativum HOM05D003161 ORTHO05D005173 1.0e-09 67.4 141 37.6
Phvul.007G270000 Phaseolus vulgaris HOM05D003161 ORTHO05D005173 1.7e-09 66.6 141 38.3
Ca_25942_v3 Cicer arietinum L. HOM05D003161 ORTHO05D005173 2.9e-09 65.9 148 41.2
SEGI_29966 Sequoiadendron giganteum HOM05D003161 ORTHO05D015567 3.8e-09 65.5 118 39.0
Medtr1g054710 Medicago truncatula HOM05D003161 ORTHO05D005173 8.5e-09 64.3 138 34.8
HanXRQChr14g0457761 Helianthus annuus HOM05D003161 ORTHO05D005173 1.4e-08 63.5 76 47.4
TPR.G14502 Trifolium pratense HOM05D003161 ORTHO05D005173 2.5e-08 62.8 141 36.2
CAN.G1433.26 Capsicum annuum HOM05D003161 ORTHO05D015567 4.2e-08 62.0 98 38.8
Lalb_Chr21g0316111 Lupinus albus HOM05D003161 ORTHO05D005173 5.5e-08 61.6 148 36.5
VMungo0720G1738 Vigna mungo HOM05D003161 ORTHO05D005173 7.2e-08 61.2 144 34.7
Haze_20072 Corylus avellana HOM05D003161 ORTHO05D005173 7.9e-07 57.8 129 45.0
arahy.Tifrunner.gnm1.ann1.PL5CUR Arachis hypogaea HOM05D003161 ORTHO05D005173 1.0e-06 57.4 140 37.9
arahy.Tifrunner.gnm1.ann1.S31791 Arachis hypogaea HOM05D003161 ORTHO05D005173 2.3e-06 56.2 139 38.1


User provided reference genes

Program Settings