Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc77.9 Carica papaya HOM05D005043 ORTHO05D006182 1.7e-213 745.7 376 100.0
Ciclev10023741m.g Citrus clementina HOM05D005043 ORTHO05D006182 7.0e-135 484.6 408 63.5
GSVIVG01014196001 Vitis vinifera HOM05D005043 ORTHO05D006182 2.0e-134 483.0 354 69.8
Atru.chr2.2132 Acer truncatum HOM05D005043 ORTHO05D006182 4.3e-132 475.3 335 71.0
Prupe.4G164600 Prunus persica HOM05D005043 ORTHO05D006182 1.2e-129 467.2 349 68.8
Dinv18365 Davidia involucrata HOM05D005043 ORTHO05D006182 2.0e-129 466.5 328 72.0
TWI38G0078 Tripterygium wilfordii HOM05D005043 ORTHO05D006182 3.4e-129 465.7 387 64.3
COL.COLO4_17542 Corchorus olitorius HOM05D005043 ORTHO05D006182 1.4e-127 460.3 327 71.3
Gohir.D01G042722 Gossypium hirsutum HOM05D005043 ORTHO05D006182 1.9e-127 459.9 335 70.1
Gorai.002G054600 Gossypium raimondii HOM05D005043 ORTHO05D006182 1.9e-127 459.9 335 70.1
Sabra16G0255900 Salix brachista HOM05D005043 ORTHO05D006182 1.9e-127 459.9 371 65.5
Lj1C829T6 Lonicera japonica HOM05D005043 ORTHO05D006182 3.2e-127 459.1 329 70.8
Potri.001G390500 Populus trichocarpa HOM05D005043 ORTHO05D006182 4.1e-127 458.8 337 69.4
TAR636G1993 Trochodendron aralioides HOM05D005043 ORTHO05D006182 5.4e-127 458.4 376 65.7
CiPaw.11G160200 Carya illinoinensis HOM05D005043 ORTHO05D006182 3.0e-125 452.6 338 69.5
MD11G1263900 Malus domestica HOM05D005043 ORTHO05D006182 3.0e-125 452.6 351 67.0
Gohir.A01G054300 Gossypium hirsutum HOM05D005043 ORTHO05D006182 3.9e-125 452.2 335 68.7
Hma1.2p1_0290F.1_g114850 Hydrangea macrophylla HOM05D005043 ORTHO05D006182 1.9e-124 449.9 406 59.4
C03p47310 Brassica napus HOM05D005043 ORTHO05D006182 2.5e-124 449.5 349 66.2
Nn7g37328 Nelumbo nucifera HOM05D005043 ORTHO05D006182 3.3e-124 449.1 364 64.0
PGR083G1657 Punica granatum HOM05D005043 ORTHO05D006182 5.6e-124 448.4 399 62.7
Duzib213G0837 Durio zibethinus HOM05D005043 ORTHO05D006182 7.3e-124 448.0 331 68.0
BolC3t17001H Brassica oleracea HOM05D005043 ORTHO05D006182 1.2e-123 447.2 349 66.5
Oeu031030.1 Olea europaea HOM05D005043 ORTHO05D006182 1.6e-123 446.8 355 66.2
Thecc.07G117100 Theobroma cacao HOM05D005043 ORTHO05D006182 1.6e-123 446.8 331 69.8
CANSAT35G1445 Cannabis sativa HOM05D005043 ORTHO05D006182 1.1e-122 444.1 376 62.2
THA.LOC104822566 Tarenaya hassleriana HOM05D005043 ORTHO05D006182 1.4e-122 443.7 358 64.2
Eucgr.F01242 Eucalyptus grandis HOM05D005043 ORTHO05D006182 1.8e-122 443.4 357 64.7
A03p39040 Brassica napus HOM05D005043 ORTHO05D006182 3.1e-122 442.6 354 64.4
BraA03t13053Z Brassica rapa HOM05D005043 ORTHO05D006182 3.1e-122 442.6 354 64.4
Manes.15G094900 Manihot esculenta HOM05D005043 ORTHO05D006182 5.2e-122 441.8 390 63.3
Sed0006465 Sechium edule HOM05D005043 ORTHO05D006182 5.2e-122 441.8 373 63.0
Thhalv10020510m.g Eutrema salsugineum HOM05D005043 ORTHO05D006182 6.8e-122 441.4 369 62.1
Sp3g13100 Schrenkiella parvula HOM05D005043 ORTHO05D006182 6.8e-122 441.4 360 64.2
Haze_09322 Corylus avellana HOM05D005043 ORTHO05D006182 1.5e-121 440.3 408 59.1
Migut.M00727 Erythranthe guttata HOM05D005043 ORTHO05D006182 1.5e-121 440.3 342 65.2
AL3G27210 Arabidopsis lyrata HOM05D005043 ORTHO05D006182 4.4e-121 438.7 365 62.5
Cc05_g11070 Coffea canephora HOM05D005043 ORTHO05D006182 9.9e-121 437.6 349 64.8
ClCG11G017440 Citrullus lanatus HOM05D005043 ORTHO05D006182 1.3e-120 437.2 393 58.5
RcHm_v2.0_Chr5g0030901 Rosa chinensis HOM05D005043 ORTHO05D006182 1.3e-120 437.2 346 65.0
Aa31LG8G2100 Aethionema arabicum HOM05D005043 ORTHO05D006182 1.7e-120 436.8 363 61.4
Carub.0003s1455 Capsella rubella HOM05D005043 ORTHO05D006182 1.7e-120 436.8 379 61.5
Medtr6g466500 Medicago truncatula HOM05D005043 ORTHO05D006182 4.9e-120 435.3 350 63.4
BcaB06g29516 Brassica carinata HOM05D005043 ORTHO05D006182 6.4e-120 434.9 360 61.7
A05p34520 Brassica napus HOM05D005043 ORTHO05D006182 1.1e-119 434.1 363 62.0
BraA05t22272Z Brassica rapa HOM05D005043 ORTHO05D006182 1.1e-119 434.1 363 62.0
BcaB06g25330 Brassica carinata HOM05D005043 ORTHO05D006182 1.9e-119 433.3 360 61.9
DCAR_017172 Daucus carota HOM05D005043 ORTHO05D006182 3.2e-119 432.6 328 67.4
MSTRG.12865 Avicennia marina HOM05D005043 ORTHO05D006182 9.2e-119 431.0 340 67.1
Ca_26224_v3 Cicer arietinum L. HOM05D005043 ORTHO05D006182 9.2e-119 431.0 334 65.0
AT3G14890 Arabidopsis thaliana HOM05D005043 ORTHO05D006182 1.2e-118 430.6 375 60.3
C05p52260 Brassica napus HOM05D005043 ORTHO05D006182 1.6e-118 430.3 361 61.5
BolC5t33915H Brassica oleracea HOM05D005043 ORTHO05D006182 2.1e-118 429.9 358 62.0
CsaV3_4G033100 Cucumis sativus L. HOM05D005043 ORTHO05D006182 2.1e-118 429.9 354 63.6
Phvul.011G162300 Phaseolus vulgaris HOM05D005043 ORTHO05D006182 3.5e-118 429.1 340 64.1
CARHR089830 Cardamine hirsuta HOM05D005043 ORTHO05D006182 7.8e-118 427.9 360 61.4
SalBow8G1024 Salvia bowleyana HOM05D005043 ORTHO05D006182 7.8e-118 427.9 341 65.1
SGA_v2.0_scaffold70G23376 Striga asiatica HOM05D005043 ORTHO05D006182 3.9e-117 425.6 342 65.5
Lalb_Chr03g0031161 Lupinus albus HOM05D005043 ORTHO05D006182 1.5e-116 423.7 347 64.6
Rhsim06G0208200 Rhododendron simsii HOM05D005043 ORTHO05D006182 1.5e-116 423.7 347 62.2
MBI06_g29324_MAGBIO Magnolia biondii HOM05D005043 ORTHO05D006182 5.6e-116 421.8 466 51.9
HanXRQChr13g0390281 Helianthus annuus HOM05D005043 ORTHO05D006182 6.2e-115 418.3 329 64.7
HanXRQChr12g0362951 Helianthus annuus HOM05D005043 ORTHO05D006182 1.4e-114 417.2 328 64.6
Solyc07g062430.3 Solanum lycopersicum HOM05D005043 ORTHO05D006182 7.6e-113 411.4 345 61.2
Sopen07g030670 Solanum pennellii HOM05D005043 ORTHO05D006182 1.7e-112 410.2 343 61.2
Peaxi162Scf00111g01457 Petunia axillaris HOM05D005043 ORTHO05D006182 2.9e-112 409.5 347 59.4
arahy.Tifrunner.gnm1.ann1.NUK3H0 Arachis hypogaea HOM05D005043 ORTHO05D006182 3.8e-112 409.1 334 62.9
EL10Ac4g08345 Beta vulgaris HOM05D005043 ORTHO05D006182 4.9e-112 408.7 376 59.0
CDE09G1444 Ceratophyllum demersum HOM05D005043 ORTHO05D006182 6.4e-112 408.3 346 60.7
FAN21G3659 Fragaria x ananassa HOM05D005043 ORTHO05D006182 8.4e-112 407.9 339 63.4
FAN25G1853 Fragaria x ananassa HOM05D005043 ORTHO05D006182 2.4e-111 406.4 339 63.4
FvH4_3g18270 Fragaria vesca HOM05D005043 ORTHO05D006182 5.4e-111 405.2 330 63.9
FAN11G3478 Fragaria x ananassa HOM05D005043 ORTHO05D006182 1.6e-110 403.7 339 62.5
arahy.Tifrunner.gnm1.ann1.5E18AM Arachis hypogaea HOM05D005043 ORTHO05D006182 2.1e-110 403.3 340 61.8
CAN.G375.16 Capsicum annuum HOM05D005043 ORTHO05D006182 2.1e-110 403.3 345 61.2
Glyma.12G157700 Glycine max HOM05D005043 ORTHO05D006182 2.1e-110 403.3 380 55.5
FAN16G3394 Fragaria x ananassa HOM05D005043 ORTHO05D006182 4.6e-110 402.1 339 62.2
PGSC0003DMG400007070 Solanum tuberosum HOM05D005043 ORTHO05D006182 4.6e-110 402.1 333 61.0
vmacro11941 Vaccinium macrocarpon HOM05D005043 ORTHO05D006182 1.3e-109 400.6 452 49.1
Aqoxy7G03872 Aquilegia oxysepala HOM05D005043 ORTHO05D006182 3.9e-109 399.1 319 62.7
PSO478G3490 Papaver somniferum HOM05D005043 ORTHO05D006182 1.5e-108 397.1 333 62.2
Lsat_1_v5_gn_9_99860 Lactuca sativa HOM05D005043 ORTHO05D006182 4.3e-108 395.6 328 62.2
ECA240G3232 Erigeron canadensis HOM05D005043 ORTHO05D006182 7.3e-108 394.8 320 64.1
PSO782G2110 Papaver somniferum HOM05D005043 ORTHO05D006182 6.2e-107 391.7 347 60.5
SalBow1G3547 Salvia bowleyana HOM05D005043 ORTHO05D006182 1.2e-105 387.5 341 60.4
VMungo1127G0129 Vigna mungo HOM05D005043 ORTHO05D006182 3.4e-105 386.0 428 50.0
PSO384G1010 Papaver somniferum HOM05D005043 ORTHO05D006182 1.3e-104 384.0 375 57.1
TPR.G12585 Trifolium pratense HOM05D005043 ORTHO05D006182 1.3e-104 384.0 306 64.4
AUR62019576 Chenopodium quinoa HOM05D005043 ORTHO05D006182 1.7e-104 383.6 359 57.1
vmacro23467 Vaccinium macrocarpon HOM05D005043 ORTHO05D006182 1.4e-98 364.0 306 61.1
Glyma.06G229100 Glycine max HOM05D005043 ORTHO05D006182 4.0e-98 362.5 237 72.6
Lj3g0009561 Lotus japonicus HOM05D005043 ORTHO05D006182 9.9e-97 357.8 322 58.4
MELO3C025641.2 Cucumis melo HOM05D005043 ORTHO05D006182 6.4e-96 355.1 383 53.0
Lalb_Chr19g0133801 Lupinus albus HOM05D005043 ORTHO05D006182 3.2e-95 352.8 230 74.8
unitig_749.g13541 Utricularia gibba HOM05D005043 ORTHO05D006182 1.1e-92 344.4 330 57.3
vmacro23385 Vaccinium macrocarpon HOM05D005043 ORTHO05D006182 2.5e-92 343.2 409 47.4
ATR1131G028 Amborella trichopoda HOM05D005043 ORTHO05D006182 1.2e-86 324.3 305 55.4
arahy.Tifrunner.gnm1.ann1.3VV2Z3 Arachis hypogaea HOM05D005043 ORTHO05D006182 1.3e-85 320.9 205 73.7
Os01g0737300 Oryza sativa ssp. japonica HOM05D005043 ORTHO05D006182 6.5e-80 302.0 303 53.1
HPP92_009836 Vanilla planifolia HOM05D005043 ORTHO05D006182 8.2e-75 285.0 174 76.4
Pp3c6_17140 Physcomitrium patens HOM05D005043 ORTHO05D006182 2.4e-74 283.5 370 44.3
arahy.Tifrunner.gnm1.ann1.5IY6XE Arachis hypogaea HOM05D005043 ORTHO05D006182 9.0e-74 281.6 205 67.8
QL08p026231 Quercus lobata HOM05D005043 ORTHO05D006182 2.5e-68 263.5 147 82.3
CBR_g66772 Chara braunii HOM05D005043 ORTHO05D006182 1.4e-66 257.7 349 41.3
Nitab4.5_0006953g0040 Nicotiana tabacum HOM05D005043 ORTHO05D006182 4.1e-66 256.1 340 44.4
Mapoly0056s0069 Marchantia polymorpha HOM05D005043 ORTHO05D006182 2.6e-65 253.4 327 44.0
Sc16g0007590 Simmondsia chinensis HOM05D005043 ORTHO05D006182 4.5e-65 252.7 301 50.5
AUR62042780 Chenopodium quinoa HOM05D005043 ORTHO05D006182 1.7e-64 250.8 147 78.9
SMO137G0206 Selaginella moellendorffii HOM05D005043 ORTHO05D006182 3.8e-64 249.6 190 61.1
AagrBONN_evm.TU.Sc2ySwM_228.1872 Anthoceros agrestis HOM05D005043 ORTHO05D006182 3.9e-61 239.6 283 47.0
Thecc.07G116500 Theobroma cacao HOM05D005043 ORTHO05D006182 2.4e-58 230.3 140 77.9
BcaNung07105 Brassica carinata HOM05D005043 ORTHO05D006182 3.5e-49 199.9 200 56.0
QL08p026221 Quercus lobata HOM05D005043 ORTHO05D006182 6.1e-46 189.1 204 52.5
Ah.04g164250 Amaranthus hybridus HOM05D005043 ORTHO05D006182 1.4e-45 188.0 118 75.4
Nitab4.5_0003565g0060 Nicotiana tabacum HOM05D005043 ORTHO05D006182 1.5e-39 167.9 332 34.3
AUR62042782 Chenopodium quinoa HOM05D005043 ORTHO05D006182 4.1e-34 149.8 203 46.8
Hma1.2p1_0113F.1_g055130 Hydrangea macrophylla HOM05D005043 ORTHO05D006182 2.9e-32 143.7 93 75.3
Psat3g077040 Pisum sativum HOM05D005043 ORTHO05D006182 2.8e-30 137.1 297 33.0
MCO04G542 Micromonas commoda HOM05D005043 ORTHO05D006182 4.0e-29 133.3 189 38.6
Cre09.g388726 Chlamydomonas reinhardtii HOM05D005043 ORTHO05D006182 2.9e-27 127.1 186 37.1
SHI37131 Sapria himalayana HOM05D005043 ORTHO05D006182 4.0e-21 106.7 65 75.4
CSS0039124 Camellia sinensis var. sinensis HOM05D005043 ORTHO05D006182 1.2e-20 105.1 115 53.9
CSS0038261 Camellia sinensis var. sinensis HOM05D005043 ORTHO05D006182 3.7e-19 100.1 98 55.1
PRCOL_00001017 Prasinoderma coloniale HOM05D005043 ORTHO05D006182 1.9e-18 97.8 167 34.7
MSTRG.9725 Avicennia marina HOM05D005043 ORTHO05D000110 5.0e-16 89.7 96 51.0
Medtr6g052000 Medicago truncatula HOM05D005043 ORTHO05D006182 6.6e-16 89.4 109 48.6
Hund10554 Selenicereus undatus HOM05D005043 ORTHO05D006182 1.5e-15 88.2 94 52.1
FvH4_4g05840 Fragaria vesca HOM05D005043 ORTHO05D006182 4.3e-15 86.7 139 43.2
Actinidia09808 Actinidia chinensis HOM05D005043 ORTHO05D006182 7.3e-15 85.9 185 35.7
PSO478G1721 Papaver somniferum HOM05D005043 ORTHO05D006182 2.1e-14 84.3 149 38.9
Psat3g076960 Pisum sativum HOM05D005043 ORTHO05D006182 8.1e-14 82.4 85 51.8
PSO782G5034 Papaver somniferum HOM05D005043 ORTHO05D006182 1.1e-13 82.0 106 45.3
SEGI_01303 Sequoiadendron giganteum HOM05D005043 ORTHO05D006182 2.3e-13 80.9 59 64.4
arahy.Tifrunner.gnm1.ann1.SEI0XU Arachis hypogaea HOM05D000735 ORTHO05D000838 3.1e-13 80.5 86 47.7
Medtr6g052005 Medicago truncatula HOM05D005043 ORTHO05D006182 5.2e-13 79.7 44 79.5
TPR.G17654 Trifolium pratense HOM05D005043 ORTHO05D006182 6.8e-13 79.3 53 69.8
ECA240G0297 Erigeron canadensis HOM05D005043 ORTHO05D006182 1.2e-12 78.6 106 48.1
Psat3g076920 Pisum sativum HOM05D005043 ORTHO05D006182 1.2e-12 78.6 85 50.6
Psat3g076840 Pisum sativum HOM05D005043 ORTHO05D006182 7.5e-12 75.9 90 47.8
Medtr6g464930 Medicago truncatula HOM05D005043 ORTHO05D006182 6.4e-11 72.8 47 70.2
CSS0012296 Camellia sinensis var. sinensis HOM05D005043 ORTHO05D006182 1.4e-10 71.6 36 88.9
SMO175G0006 Selaginella moellendorffii HOM05D017119 ORTHO05D006182 2.4e-10 70.9 68 44.1
RcHm_v2.0_Chr5g0030891 Rosa chinensis HOM05D005043 ORTHO05D006182 4.1e-10 70.1 101 44.6
Zm00001eb153930 Zea mays HOM05D005043 ORTHO05D006182 9.2e-10 68.9 116 37.1
SEGI_37980 Sequoiadendron giganteum HOM05D005043 ORTHO05D006182 5.1e-08 63.2 127 35.4
RcHm_v2.0_Chr1g0352751 Rosa chinensis HOM05D005043 ORTHO05D006182 8.6e-08 62.4 41 63.4


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