Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc76.53 Carica papaya HOM05D001734 ORTHO05D003483 1.3e-238 829.3 422 100.0
QL10p011601 Quercus lobata HOM05D001734 ORTHO05D003483 3.0e-158 562.4 411 70.3
CiPaw.11G026100 Carya illinoinensis HOM05D001734 ORTHO05D003483 6.6e-158 561.2 412 68.4
Duzib084G0583 Durio zibethinus HOM05D001734 ORTHO05D003483 3.3e-157 558.9 414 67.6
COL.COLO4_30039 Corchorus olitorius HOM05D001734 ORTHO05D003483 5.6e-157 558.1 410 68.8
Thecc.03G012800 Theobroma cacao HOM05D001734 ORTHO05D003483 2.4e-155 552.7 410 67.8
RcHm_v2.0_Chr6g0271131 Rosa chinensis HOM05D001734 ORTHO05D003483 1.9e-152 543.1 412 67.0
Gohir.A09G171700 Gossypium hirsutum HOM05D001734 ORTHO05D003483 1.2e-151 540.4 409 66.0
Dinv20652 Davidia involucrata HOM05D001734 ORTHO05D003483 7.9e-151 537.7 411 66.9
Gohir.D09G167401 Gossypium hirsutum HOM05D001734 ORTHO05D003483 3.9e-150 535.4 409 65.5
Prupe.5G173600 Prunus persica HOM05D001734 ORTHO05D003483 3.9e-150 535.4 400 67.2
MD06G1173700 Malus domestica HOM05D001734 ORTHO05D003483 5.3e-147 525.0 400 66.0
FvH4_2g11670 Fragaria vesca HOM05D001734 ORTHO05D003483 9.0e-147 524.2 413 65.4
FAN15G3378 Fragaria x ananassa HOM05D001734 ORTHO05D003483 2.6e-146 522.7 413 64.9
Haze_07473 Corylus avellana HOM05D001734 ORTHO05D003483 3.4e-146 522.3 411 65.5
TAR629G1256 Trochodendron aralioides HOM05D001734 ORTHO05D003483 1.7e-145 520.0 412 65.3
Atru.chr9.2479 Acer truncatum HOM05D001734 ORTHO05D003483 1.9e-144 516.5 410 66.3
Potri.015G076650 Populus trichocarpa HOM05D001734 ORTHO05D003483 1.6e-143 513.5 410 63.4
Psat5g114800 Pisum sativum HOM05D001734 ORTHO05D003483 2.1e-143 513.1 401 64.8
Sabra15G0101700 Salix brachista HOM05D001734 ORTHO05D003483 1.5e-141 506.9 449 58.1
CANSAT80G1574 Cannabis sativa HOM05D001734 ORTHO05D003483 2.1e-140 503.1 409 62.6
TWI14G0283 Tripterygium wilfordii HOM05D001734 ORTHO05D003483 1.4e-139 500.4 413 60.8
Lj1g0011912 Lotus japonicus HOM05D001734 ORTHO05D003483 2.4e-139 499.6 400 63.0
Lalb_Chr08g0236501 Lupinus albus HOM05D001734 ORTHO05D003483 1.2e-138 497.3 409 64.3
Manes.06G105000 Manihot esculenta HOM05D001734 ORTHO05D003483 1.2e-138 497.3 407 62.4
Ca_16176_v3 Cicer arietinum L. HOM05D001734 ORTHO05D003483 2.6e-138 496.1 414 62.6
PGR044G0033 Punica granatum HOM05D001734 ORTHO05D003483 7.6e-138 494.6 410 62.9
Gorai.006G189100 Gossypium raimondii HOM05D001734 ORTHO05D003483 1.3e-137 493.8 461 57.0
arahy.Tifrunner.gnm1.ann1.0L1HI6 Arachis hypogaea HOM05D001734 ORTHO05D003483 4.9e-137 491.9 411 63.5
Actinidia19322 Actinidia chinensis HOM05D001734 ORTHO05D003483 8.4e-137 491.1 410 62.2
Glyma.04G182900 Glycine max HOM05D001734 ORTHO05D003483 4.2e-136 488.8 400 62.8
Sc04g0001800 Simmondsia chinensis HOM05D001734 ORTHO05D003483 3.5e-135 485.7 404 62.1
Medtr3g077860 Medicago truncatula HOM05D001734 ORTHO05D003483 4.6e-135 485.3 400 61.8
EL10Ac5g10743 Beta vulgaris HOM05D001734 ORTHO05D003483 8.7e-134 481.1 414 60.4
MELO3C017087.2 Cucumis melo HOM05D001734 ORTHO05D003483 1.6e-132 476.9 411 57.2
Phvul.009G178400 Phaseolus vulgaris HOM05D001734 ORTHO05D003483 4.8e-132 475.3 412 61.4
Nn4g22757 Nelumbo nucifera HOM05D001734 ORTHO05D003483 9.0e-131 471.1 415 58.8
GSVIVG01007755001 Vitis vinifera HOM05D001734 ORTHO05D003483 4.5e-130 468.8 422 61.1
CsaV3_1G001470 Cucumis sativus L. HOM05D001734 ORTHO05D003483 7.6e-130 468.0 411 56.9
Aqoxy3G02937 Aquilegia oxysepala HOM05D001734 ORTHO05D003483 1.3e-129 467.2 415 59.0
Sed0023277 Sechium edule HOM05D001734 ORTHO05D003483 3.8e-129 465.7 414 56.3
THA.LOC104818218 Tarenaya hassleriana HOM05D001734 ORTHO05D003483 2.7e-127 459.5 413 56.9
FAN05G4580 Fragaria x ananassa HOM05D001734 ORTHO05D003483 1.0e-126 457.6 373 63.3
Solyc03g112950.4 Solanum lycopersicum HOM05D001734 ORTHO05D003483 1.0e-126 457.6 411 58.6
Eucgr.K02842 Eucalyptus grandis HOM05D001734 ORTHO05D003483 3.0e-126 456.1 430 57.9
Sopen03g032020 Solanum pennellii HOM05D001734 ORTHO05D003483 5.1e-126 455.3 411 58.6
Thhalv10010050m.g Eutrema salsugineum HOM05D001734 ORTHO05D003483 8.8e-126 454.5 408 57.1
Sp5g13840 Schrenkiella parvula HOM05D001734 ORTHO05D003483 4.3e-125 452.2 408 57.1
SalBow5G1563 Salvia bowleyana HOM05D001734 ORTHO05D003483 9.7e-125 451.1 413 55.9
HanXRQChr02g0036361 Helianthus annuus HOM05D001734 ORTHO05D003483 4.8e-124 448.7 410 55.6
SGA_v2.0_scaffold90G27914 Striga asiatica HOM05D001734 ORTHO05D003483 2.4e-123 446.4 414 56.0
Migut.I00009 Erythranthe guttata HOM05D001734 ORTHO05D003483 2.0e-122 443.4 411 55.0
arahy.Tifrunner.gnm1.ann1.2D0TBT Arachis hypogaea HOM05D001734 ORTHO05D003483 1.0e-121 441.0 449 55.9
A06p27460 Brassica napus HOM05D001734 ORTHO05D003483 1.4e-120 437.2 442 52.9
Aa31LG4G16790 Aethionema arabicum HOM05D001734 ORTHO05D003483 2.5e-120 436.4 408 57.6
BolC3t18938H Brassica oleracea HOM05D001734 ORTHO05D003483 1.2e-119 434.1 442 52.9
DCAR_026136 Daucus carota HOM05D001734 ORTHO05D003483 2.1e-119 433.3 427 54.8
PSO063G0326 Papaver somniferum HOM05D001734 ORTHO05D003483 3.6e-119 432.6 413 55.0
PSO063G7150 Papaver somniferum HOM05D001734 ORTHO05D003483 6.1e-119 431.8 413 55.2
ClCG06G017040 Citrullus lanatus HOM05D001734 ORTHO05D003483 7.9e-119 431.4 411 53.5
CAN.G1305.19 Capsicum annuum HOM05D001734 ORTHO05D003483 1.4e-118 430.6 413 56.2
ECA247G1446 Erigeron canadensis HOM05D001734 ORTHO05D003483 1.1e-117 427.6 411 54.0
MSTRG.11455 Avicennia marina HOM05D001734 ORTHO05D003483 2.0e-117 426.8 410 54.4
AL5G27530 Arabidopsis lyrata HOM05D001734 ORTHO05D003483 2.6e-117 426.4 413 54.2
Hund02744 Selenicereus undatus HOM05D001734 ORTHO05D003483 7.4e-117 424.9 356 59.8
Oeu016387.4 Olea europaea HOM05D001734 ORTHO05D003483 1.3e-116 424.1 419 53.5
C03p66700 Brassica napus HOM05D001734 ORTHO05D003483 8.2e-116 421.4 465 50.3
Carub.0005s1431 Capsella rubella HOM05D001734 ORTHO05D003483 1.4e-115 420.6 408 54.2
FAN24G1896 Fragaria x ananassa HOM05D001734 ORTHO05D003483 1.0e-113 414.5 420 54.5
AT3G48190 Arabidopsis thaliana HOM05D001734 ORTHO05D003483 2.2e-113 413.3 443 51.0
Cfa019134 Carpinus fangiana HOM05D001734 ORTHO05D003483 1.4e-112 410.6 411 56.0
AUR62008208 Chenopodium quinoa HOM05D001734 ORTHO05D003483 2.3e-110 403.3 412 53.9
Ciclev10018427m.g Citrus clementina HOM05D001734 ORTHO05D003483 6.3e-108 395.2 412 54.1
CARHR156920 Cardamine hirsuta HOM05D001734 ORTHO05D003483 7.0e-107 391.7 417 50.8
ATR0730G231 Amborella trichopoda HOM05D001734 ORTHO05D003483 1.7e-105 387.1 413 48.7
VMungo1309G1151 Vigna mungo HOM05D001734 ORTHO05D003483 9.7e-101 371.3 421 50.1
Nitab4.5_0000785g0010 Nicotiana tabacum HOM05D001734 ORTHO05D003483 9.1e-99 364.8 365 53.4
Lsat_1_v5_gn_1_27061 Lactuca sativa HOM05D001734 ORTHO05D003483 7.0e-91 338.6 410 46.3
CDE07G1059 Ceratophyllum demersum HOM05D001734 ORTHO05D003483 2.7e-90 336.7 414 45.2
Os01g0106700 Oryza sativa ssp. japonica HOM05D001734 ORTHO05D003483 1.0e-89 334.7 403 45.7
HPP92_004868 Vanilla planifolia HOM05D001734 ORTHO05D003483 7.2e-88 328.6 371 45.3
AUR62030960 Chenopodium quinoa HOM05D001734 ORTHO05D003483 9.5e-88 328.2 379 49.1
Nitab4.5_0000984g0090 Nicotiana tabacum HOM05D001734 ORTHO05D003483 1.4e-86 324.3 328 54.0
vmacro19388 Vaccinium macrocarpon HOM05D001734 ORTHO05D003483 1.5e-85 320.9 372 48.9
Zm00001eb126710 Zea mays HOM05D001734 ORTHO05D003483 3.7e-84 316.2 398 44.0
FAN20G1174 Fragaria x ananassa HOM05D001734 ORTHO05D003483 1.5e-80 304.3 249 63.9
BraA06t25686Z Brassica rapa HOM05D001734 ORTHO05D003483 2.3e-78 297.0 260 58.5
FAN20G1266 Fragaria x ananassa HOM05D001734 ORTHO05D003483 2.3e-78 297.0 249 63.1
unitig_0.g1441 Utricularia gibba HOM05D001734 ORTHO05D003483 4.4e-77 292.7 400 42.2
Lj9A448G34 Lonicera japonica HOM05D001734 ORTHO05D003483 2.0e-69 267.3 217 62.7
TPR.G6034 Trifolium pratense HOM05D001734 ORTHO05D003483 2.4e-67 260.4 225 60.0
Peaxi162Scf00009g00114 Petunia axillaris HOM05D001734 ORTHO05D003483 1.2e-66 258.1 313 49.5
Pp3c2_23700 Physcomitrium patens HOM05D001734 ORTHO05D003483 3.3e-64 250.0 417 36.0
Mapoly0081s0051 Marchantia polymorpha HOM05D001734 ORTHO05D003483 1.5e-61 241.1 435 32.9
AagrBONN_evm.TU.Sc2ySwM_117.1596 Anthoceros agrestis HOM05D001734 ORTHO05D003483 1.9e-43 181.0 430 28.6
SEGI_29837 Sequoiadendron giganteum HOM05D001734 ORTHO05D003483 3.2e-43 180.3 239 38.1
CSS0000775 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D033929 1.4e-38 164.9 138 59.4
BraA06t25687Z Brassica rapa HOM05D001734 ORTHO05D003483 9.0e-38 162.2 148 55.4
TPR.G6035 Trifolium pratense HOM05D001734 ORTHO05D003483 7.6e-29 132.5 96 66.7
CBR_g292 Chara braunii HOM05D001734 ORTHO05D003483 1.7e-28 131.3 276 29.7
CSS0041674 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D033929 4.2e-27 126.7 144 50.7
Peaxi162Scf00009g00112 Petunia axillaris HOM05D001734 ORTHO05D003483 5.3e-22 109.8 80 63.8
SHI17000 Sapria himalayana HOM05D001734 ORTHO05D033929 1.3e-15 88.6 192 33.9
Cc04_g14140 Coffea canephora HOM05D001734 ORTHO05D003483 1.4e-14 85.1 81 49.4
SHI17001 Sapria himalayana HOM05D001734 ORTHO05D003483 4.1e-14 83.6 79 58.2
VMungo0464G0876 Vigna mungo HOM05D001734 ORTHO05D435229 1.3e-12 78.6 63 54.0
CSS0043056 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D003483 1.8e-09 68.2 46 69.6
SHI16997 Sapria himalayana HOM05D001734 ORTHO05D003483 4.1e-06 57.0 78 48.7


User provided reference genes

Program Settings