Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc76.49 Carica papaya HOM05D001734 ORTHO05D003483 1.1e-176 623.2 318 100.0
Thecc.03G012800 Theobroma cacao HOM05D001734 ORTHO05D003483 4.5e-82 308.9 290 56.2
Haze_07473 Corylus avellana HOM05D001734 ORTHO05D003483 9.3e-80 301.2 290 55.5
Cfa019134 Carpinus fangiana HOM05D001734 ORTHO05D003483 1.2e-79 300.8 290 55.9
CiPaw.11G026100 Carya illinoinensis HOM05D001734 ORTHO05D003483 7.9e-79 298.1 289 55.0
Manes.06G105000 Manihot esculenta HOM05D001734 ORTHO05D003483 5.7e-77 292.0 289 54.0
Atru.chr9.2479 Acer truncatum HOM05D001734 ORTHO05D003483 1.3e-76 290.8 299 52.8
QL10p011601 Quercus lobata HOM05D001734 ORTHO05D003483 2.0e-74 283.5 290 53.4
Potri.015G076650 Populus trichocarpa HOM05D001734 ORTHO05D003483 6.5e-73 278.5 311 50.5
Duzib084G0583 Durio zibethinus HOM05D001734 ORTHO05D003483 1.4e-72 277.3 290 53.4
Ciclev10018427m.g Citrus clementina HOM05D001734 ORTHO05D003483 9.4e-72 274.6 299 51.2
Prupe.5G173600 Prunus persica HOM05D001734 ORTHO05D003483 2.7e-71 273.1 305 49.5
Gorai.006G189100 Gossypium raimondii HOM05D001734 ORTHO05D003483 4.3e-69 265.8 290 51.4
Gohir.D09G167401 Gossypium hirsutum HOM05D001734 ORTHO05D003483 1.7e-68 263.8 290 51.0
Dinv20652 Davidia involucrata HOM05D001734 ORTHO05D003483 2.8e-68 263.1 291 49.5
COL.COLO4_30039 Corchorus olitorius HOM05D001734 ORTHO05D003483 3.7e-68 262.7 305 48.2
Sabra15G0101700 Salix brachista HOM05D001734 ORTHO05D003483 6.3e-68 261.9 311 47.9
Gohir.A09G171700 Gossypium hirsutum HOM05D001734 ORTHO05D003483 8.2e-68 261.5 285 50.9
GSVIVG01007755001 Vitis vinifera HOM05D001734 ORTHO05D003483 3.4e-66 256.1 299 47.2
TWI14G0283 Tripterygium wilfordii HOM05D001734 ORTHO05D003483 1.0e-65 254.6 284 50.4
RcHm_v2.0_Chr6g0271131 Rosa chinensis HOM05D001734 ORTHO05D003483 7.2e-64 248.4 299 48.8
MD06G1173700 Malus domestica HOM05D001734 ORTHO05D003483 2.3e-62 243.4 289 48.1
Hma1.2p1_0701F.1_g205860 Hydrangea macrophylla HOM05D001734 ORTHO05D003483 1.5e-61 240.7 290 46.2
CSS0012833 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D003483 1.3e-60 237.7 292 46.9
CANSAT80G1574 Cannabis sativa HOM05D001734 ORTHO05D003483 2.2e-60 236.9 282 50.4
FvH4_2g11670 Fragaria vesca HOM05D001734 ORTHO05D003483 8.2e-60 235.0 288 46.5
Lalb_Chr08g0236501 Lupinus albus HOM05D001734 ORTHO05D003483 1.4e-59 234.2 307 45.0
FAN24G1896 Fragaria x ananassa HOM05D001734 ORTHO05D003483 4.1e-59 232.6 288 46.2
FAN05G4580 Fragaria x ananassa HOM05D001734 ORTHO05D003483 5.3e-59 232.3 289 46.0
FAN15G3378 Fragaria x ananassa HOM05D001734 ORTHO05D003483 3.5e-58 229.6 289 46.4
Rhsim08G0172200 Rhododendron simsii HOM05D001734 ORTHO05D003483 3.2e-56 223.0 292 45.5
Glyma.04G182900 Glycine max HOM05D001734 ORTHO05D003483 2.7e-55 219.9 295 45.1
PGR044G0033 Punica granatum HOM05D001734 ORTHO05D003483 3.6e-55 219.5 282 44.0
Sed0023277 Sechium edule HOM05D001734 ORTHO05D003483 1.1e-53 214.5 286 42.3
Nn4g22757 Nelumbo nucifera HOM05D001734 ORTHO05D003483 4.4e-53 212.6 299 42.5
Actinidia19322 Actinidia chinensis HOM05D001734 ORTHO05D003483 1.7e-52 210.7 294 44.2
EL10Ac5g10743 Beta vulgaris HOM05D001734 ORTHO05D003483 2.2e-52 210.3 280 41.1
Lj9A448G32 Lonicera japonica HOM05D001734 ORTHO05D003483 6.3e-52 208.8 287 44.6
Lj1g0011912 Lotus japonicus HOM05D001734 ORTHO05D003483 8.2e-52 208.4 295 42.7
Oeu016387.4 Olea europaea HOM05D001734 ORTHO05D003483 1.1e-51 208.0 289 45.0
ClCG06G017040 Citrullus lanatus HOM05D001734 ORTHO05D003483 2.4e-51 206.8 288 42.7
Cc04_g14140 Coffea canephora HOM05D001734 ORTHO05D003483 2.4e-51 206.8 285 42.8
AT3G48190 Arabidopsis thaliana HOM05D001734 ORTHO05D003483 2.6e-50 203.4 297 43.4
Carub.0005s1431 Capsella rubella HOM05D001734 ORTHO05D003483 2.6e-50 203.4 286 43.4
VMungo1309G2093 Vigna mungo HOM05D001734 ORTHO05D003483 4.5e-50 202.6 321 40.5
CARHR156920 Cardamine hirsuta HOM05D001734 ORTHO05D003483 7.7e-50 201.8 297 42.4
AL5G27530 Arabidopsis lyrata HOM05D001734 ORTHO05D003483 2.2e-49 200.3 289 43.6
MELO3C017087.2 Cucumis melo HOM05D001734 ORTHO05D003483 1.5e-48 197.6 288 42.0
vmacro19388 Vaccinium macrocarpon HOM05D001734 ORTHO05D003483 1.9e-48 197.2 266 45.5
Sp5g13840 Schrenkiella parvula HOM05D001734 ORTHO05D003483 7.2e-48 195.3 303 39.9
CsaV3_1G001470 Cucumis sativus L. HOM05D001734 ORTHO05D003483 1.6e-47 194.1 288 41.7
HanXRQChr02g0036361 Helianthus annuus HOM05D001734 ORTHO05D003483 8.0e-47 191.8 277 41.5
arahy.Tifrunner.gnm1.ann1.2D0TBT Arachis hypogaea HOM05D001734 ORTHO05D003483 1.0e-46 191.4 282 40.8
DCAR_026136 Daucus carota HOM05D001734 ORTHO05D003483 3.0e-46 189.9 292 39.0
Phvul.009G178400 Phaseolus vulgaris HOM05D001734 ORTHO05D003483 6.7e-46 188.7 291 41.2
C03p66700 Brassica napus HOM05D001734 ORTHO05D003483 2.6e-45 186.8 289 40.5
BolC3t18938H Brassica oleracea HOM05D001734 ORTHO05D003483 2.6e-45 186.8 289 40.5
Medtr3g077860 Medicago truncatula HOM05D001734 ORTHO05D003483 2.6e-45 186.8 290 40.3
A06p27460 Brassica napus HOM05D001734 ORTHO05D003483 4.4e-45 186.0 289 40.1
BraA06t25686Z Brassica rapa HOM05D001734 ORTHO05D003483 4.4e-45 186.0 289 40.1
Thhalv10010050m.g Eutrema salsugineum HOM05D001734 ORTHO05D003483 7.5e-45 185.3 303 39.6
Rhsim08G0157900 Rhododendron simsii HOM05D001734 ORTHO05D003483 1.3e-44 184.5 291 40.5
Nitab4.5_0000984g0090 Nicotiana tabacum HOM05D001734 ORTHO05D003483 6.3e-44 182.2 284 38.7
ECA247G1446 Erigeron canadensis HOM05D001734 ORTHO05D003483 8.3e-44 181.8 276 38.4
Migut.I00009 Erythranthe guttata HOM05D001734 ORTHO05D003483 1.1e-43 181.4 288 39.2
Nitab4.5_0000785g0010 Nicotiana tabacum HOM05D001734 ORTHO05D003483 1.1e-43 181.4 297 38.4
THA.LOC104818218 Tarenaya hassleriana HOM05D001734 ORTHO05D003483 1.1e-43 181.4 291 37.1
TPR.G6035 Trifolium pratense HOM05D001734 ORTHO05D003483 1.4e-43 181.0 279 40.1
MSTRG.11455 Avicennia marina HOM05D001734 ORTHO05D003483 2.4e-43 180.3 285 38.9
SGA_v2.0_scaffold90G27914 Striga asiatica HOM05D001734 ORTHO05D003483 3.1e-43 179.9 307 40.4
SalBow5G1563 Salvia bowleyana HOM05D001734 ORTHO05D003483 9.1e-43 178.3 298 39.3
Sopen03g032020 Solanum pennellii HOM05D001734 ORTHO05D003483 9.1e-43 178.3 283 39.2
Aqoxy3G02937 Aquilegia oxysepala HOM05D001734 ORTHO05D003483 2.0e-42 177.2 287 38.7
Eucgr.K02842 Eucalyptus grandis HOM05D001734 ORTHO05D003483 7.7e-42 175.3 289 39.4
PSO063G0326 Papaver somniferum HOM05D001734 ORTHO05D003483 1.0e-41 174.9 288 37.8
Aa31LG4G16790 Aethionema arabicum HOM05D001734 ORTHO05D003483 1.7e-41 174.1 333 36.0
PSO063G7150 Papaver somniferum HOM05D001734 ORTHO05D003483 1.7e-41 174.1 292 38.4
Sc04g0001800 Simmondsia chinensis HOM05D001734 ORTHO05D003483 1.7e-41 174.1 307 36.8
Lsat_1_v5_gn_1_27061 Lactuca sativa HOM05D001734 ORTHO05D003483 6.5e-41 172.2 272 43.8
CAN.G1305.19 Capsicum annuum HOM05D001734 ORTHO05D003483 1.7e-36 157.5 250 39.6
AUR62008208 Chenopodium quinoa HOM05D001734 ORTHO05D003483 4.2e-32 142.9 227 37.0
Peaxi162Scf00009g00112 Petunia axillaris HOM05D001734 ORTHO05D003483 1.6e-31 141.0 261 37.5
AUR62030960 Chenopodium quinoa HOM05D001734 ORTHO05D003483 2.8e-31 140.2 227 36.6
SHI17005 Sapria himalayana HOM05D001734 ORTHO05D003483 1.8e-27 127.5 213 38.5
CDE07G1059 Ceratophyllum demersum HOM05D001734 ORTHO05D003483 2.4e-27 127.1 304 33.6
Ca_05696_v3 Cicer arietinum L. HOM05D001734 ORTHO05D003483 7.8e-26 122.1 185 41.6
ATR0730G231 Amborella trichopoda HOM05D001734 ORTHO05D003483 1.0e-25 121.7 277 33.6
HPP92_004845 Vanilla planifolia HOM05D002152 ORTHO05D003483 3.6e-23 113.2 276 31.9
Zm00001eb126710 Zea mays HOM05D001734 ORTHO05D003483 2.2e-20 104.0 271 28.0
QL01p024072 Quercus lobata HOM05D001734 ORTHO05D020518 4.1e-19 99.8 163 42.3
Os01g0106700 Oryza sativa ssp. japonica HOM05D001734 ORTHO05D003483 1.7e-17 94.4 299 30.4
QL01p024955 Quercus lobata HOM05D001734 ORTHO05D020518 4.1e-11 73.2 61 63.9
Lsat_1_v5_gn_6_39261 Lactuca sativa HOM05D001734 ORTHO05D020518 5.6e-08 62.8 54 61.1
Cpa.g.sc44.30 Carica papaya HOM05D000508 ORTHO05D000371 2.8e-07 60.5 28 96.4
SHI17006 Sapria himalayana HOM05D001734 ORTHO05D020518 6.2e-07 59.3 60 51.7


User provided reference genes

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