Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc6.46 Carica papaya HOM05D001054 ORTHO05D007110 0.0e+00 1113.2 539 100.0
TWI09G0178 Tripterygium wilfordii HOM05D001054 ORTHO05D007110 6.5e-283 976.9 539 85.9
Nn7g37208 Nelumbo nucifera HOM05D001054 ORTHO05D007110 1.4e-282 975.7 539 85.3
Thecc.01G069100 Theobroma cacao HOM05D001054 ORTHO05D007110 1.8e-280 968.8 540 87.4
TAR625G0225 Trochodendron aralioides HOM05D001054 ORTHO05D007110 1.8e-280 968.8 539 85.2
Manes.13G113500 Manihot esculenta HOM05D001054 ORTHO05D007110 1.7e-278 962.2 539 85.0
Aa31LG6G14390 Aethionema arabicum HOM05D001054 ORTHO05D007110 1.1e-277 959.5 537 85.1
Gorai.008G080600 Gossypium raimondii HOM05D001054 ORTHO05D007110 1.4e-277 959.1 540 85.9
Prupe.6G223800 Prunus persica HOM05D001054 ORTHO05D007110 3.1e-277 958.0 539 84.2
TAR628G0943 Trochodendron aralioides HOM05D001054 ORTHO05D007110 6.9e-277 956.8 539 84.0
Cfa004102 Carpinus fangiana HOM05D001054 ORTHO05D007110 9.1e-277 956.4 541 84.7
Gohir.D12G073300 Gossypium hirsutum HOM05D001054 ORTHO05D007110 1.5e-276 955.7 540 85.6
THA.LOC104807624 Tarenaya hassleriana HOM05D001054 ORTHO05D007110 7.7e-276 953.4 537 85.5
CANSAT01G2549 Cannabis sativa HOM05D001054 ORTHO05D007110 5.0e-275 950.7 540 83.9
CsaV3_6G043910 Cucumis sativus L. HOM05D001054 ORTHO05D007110 1.9e-274 948.7 540 83.5
ClCG01G017380 Citrullus lanatus HOM05D001054 ORTHO05D007110 7.2e-274 946.8 540 84.3
Sed0014779 Sechium edule HOM05D001054 ORTHO05D007110 9.4e-274 946.4 540 83.5
Hma1.2p1_0017F.1_g012090 Hydrangea macrophylla HOM05D001054 ORTHO05D007110 4.7e-273 944.1 539 83.5
FvH4_1g17270 Fragaria vesca HOM05D001054 ORTHO05D007110 1.4e-272 942.6 539 83.3
Sp7g35190 Schrenkiella parvula HOM05D001054 ORTHO05D007110 1.8e-272 942.2 537 83.6
Eucgr.C03692 Eucalyptus grandis HOM05D001054 ORTHO05D007110 3.9e-272 941.0 544 83.3
Atru.chr3.194 Acer truncatum HOM05D001054 ORTHO05D007110 6.7e-272 940.3 539 83.7
Carub.0007s0278 Capsella rubella HOM05D001054 ORTHO05D007110 6.7e-272 940.3 525 85.3
Duzib264G0621 Durio zibethinus HOM05D001054 ORTHO05D007110 6.7e-272 940.3 540 84.4
MELO3C007616.2 Cucumis melo HOM05D001054 ORTHO05D007110 3.3e-271 937.9 566 80.4
AL7G13250 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 5.7e-271 937.2 525 85.7
COL.COLO4_11542 Corchorus olitorius HOM05D001054 ORTHO05D007110 7.4e-271 936.8 540 83.9
Thhalv10024858m.g Eutrema salsugineum HOM05D001054 ORTHO05D007110 7.4e-271 936.8 526 85.2
Sed0024674 Sechium edule HOM05D001054 ORTHO05D007110 7.4e-271 936.8 540 82.6
Potri.007G053000 Populus trichocarpa HOM05D001054 ORTHO05D007110 9.7e-271 936.4 542 81.7
AT4G37510 Arabidopsis thaliana HOM05D001054 ORTHO05D007110 2.8e-270 934.9 526 85.6
Atru.chr3.165 Acer truncatum HOM05D001054 ORTHO05D007110 4.8e-270 934.1 542 83.2
PGR004G0129 Punica granatum HOM05D001054 ORTHO05D007110 4.8e-270 934.1 540 82.8
Lj7C88G8 Lonicera japonica HOM05D001054 ORTHO05D007110 6.3e-270 933.7 526 83.8
FAN19G1445 Fragaria x ananassa HOM05D001054 ORTHO05D007110 8.2e-270 933.3 548 81.8
MSTRG.23690 Avicennia marina HOM05D001054 ORTHO05D007110 1.4e-269 932.6 539 82.7
CiPaw.01G007000 Carya illinoinensis HOM05D001054 ORTHO05D007110 4.1e-269 931.0 541 83.2
Ciclev10025341m.g Citrus clementina HOM05D001054 ORTHO05D007110 6.9e-269 930.2 540 82.6
CARHR245910 Cardamine hirsuta HOM05D001054 ORTHO05D007110 9.1e-269 929.9 543 83.4
Eucgr.C03920 Eucalyptus grandis HOM05D001054 ORTHO05D007110 9.1e-269 929.9 542 82.5
MBI19_g10811_MAGBIO Magnolia biondii HOM05D001054 ORTHO05D007110 9.1e-269 929.9 539 82.7
RcHm_v2.0_Chr2g0107461 Rosa chinensis HOM05D001054 ORTHO05D007110 1.5e-268 929.1 592 76.9
Sabra07G0046600 Salix brachista HOM05D001054 ORTHO05D007110 7.7e-268 926.8 542 81.4
DCAR_010834 Daucus carota HOM05D001054 ORTHO05D007110 1.0e-267 926.4 551 79.9
Haze_15309 Corylus avellana HOM05D001054 ORTHO05D007110 2.9e-267 924.9 561 80.6
FAN26G1436 Fragaria x ananassa HOM05D001054 ORTHO05D007110 2.9e-267 924.9 574 78.2
Oeu013280.1 Olea europaea HOM05D001054 ORTHO05D007110 2.9e-267 924.9 539 82.4
PSO541G5579 Papaver somniferum HOM05D001054 ORTHO05D007110 3.8e-267 924.5 539 81.3
PGSC0003DMG400023692 Solanum tuberosum HOM05D001054 ORTHO05D007110 3.8e-267 924.5 539 82.2
Aqoxy2G00045 Aquilegia oxysepala HOM05D001054 ORTHO05D007110 8.5e-267 923.3 542 81.9
FAN23G1327 Fragaria x ananassa HOM05D001054 ORTHO05D007110 8.5e-267 923.3 561 79.3
Rhsim10G0102900 Rhododendron simsii HOM05D001054 ORTHO05D007110 8.5e-267 923.3 589 76.6
PSO675G2247 Papaver somniferum HOM05D001054 ORTHO05D007110 1.4e-266 922.5 539 81.1
Cc07_g06840 Coffea canephora HOM05D001054 ORTHO05D007110 4.2e-266 921.0 539 81.3
Solyc10g080040.3 Solanum lycopersicum HOM05D001054 ORTHO05D007110 9.4e-266 919.8 539 81.8
Sopen10g030650 Solanum pennellii HOM05D001054 ORTHO05D007110 2.1e-265 918.7 539 81.6
SalBow6G1211 Salvia bowleyana HOM05D001054 ORTHO05D007110 1.3e-262 909.4 540 80.4
Peaxi162Scf00365g00936 Petunia axillaris HOM05D001054 ORTHO05D007110 3.7e-262 907.9 536 81.7
HanXRQChr14g0441861 Helianthus annuus HOM05D001054 ORTHO05D007110 1.4e-261 906.0 544 80.5
Nitab4.5_0002331g0050 Nicotiana tabacum HOM05D001054 ORTHO05D007110 1.4e-261 906.0 539 81.6
BcaNung03665 Brassica carinata HOM05D001054 ORTHO05D007110 3.1e-261 904.8 541 81.1
C01p01620 Brassica napus HOM05D001054 ORTHO05D007110 3.1e-261 904.8 541 81.1
ATR1096G061 Amborella trichopoda HOM05D001054 ORTHO05D007110 1.2e-260 902.9 533 80.7
Migut.H00367 Erythranthe guttata HOM05D001054 ORTHO05D007110 2.6e-260 901.7 542 80.1
Nitab4.5_0006689g0010 Nicotiana tabacum HOM05D001054 ORTHO05D007110 3.5e-260 901.4 539 81.4
CDE04G1953 Ceratophyllum demersum HOM05D001054 ORTHO05D007110 5.9e-260 900.6 538 81.6
Sc16g0004970 Simmondsia chinensis HOM05D001054 ORTHO05D007110 5.9e-260 900.6 523 82.0
Glyma.11G049900 Glycine max HOM05D001054 ORTHO05D007110 5.0e-259 897.5 542 81.0
Psat2g170280 Pisum sativum HOM05D001054 ORTHO05D007110 1.9e-258 895.6 540 79.8
BraA01t00139Z Brassica rapa HOM05D001054 ORTHO05D007110 4.2e-258 894.4 539 80.9
BolC1t00157H Brassica oleracea HOM05D001054 ORTHO05D007110 1.2e-257 892.9 542 80.3
BcaNung05084 Brassica carinata HOM05D001054 ORTHO05D007110 1.6e-257 892.5 549 79.8
A01p01450 Brassica napus HOM05D001054 ORTHO05D007110 1.6e-257 892.5 539 80.9
DCAR_021470 Daucus carota HOM05D001054 ORTHO05D007110 1.6e-257 892.5 526 80.8
AUR62003982 Chenopodium quinoa HOM05D001054 ORTHO05D007110 3.6e-257 891.3 543 79.7
AUR62040267 Chenopodium quinoa HOM05D001054 ORTHO05D007110 6.1e-257 890.6 543 79.7
TPR.G20955 Trifolium pratense HOM05D001054 ORTHO05D007110 1.8e-256 889.0 544 79.4
Lj2g0007837 Lotus japonicus HOM05D001054 ORTHO05D007110 1.5e-255 885.9 539 80.3
EL10Ac6g15648 Beta vulgaris HOM05D001054 ORTHO05D007110 3.3e-255 884.8 543 79.0
SGA_v2.0_scaffold72G24093 Striga asiatica HOM05D001054 ORTHO05D007110 5.7e-255 884.0 532 78.6
Phvul.002G012600 Phaseolus vulgaris HOM05D001054 ORTHO05D007110 3.7e-254 881.3 539 79.4
Lalb_Chr05g0213551 Lupinus albus HOM05D001054 ORTHO05D007110 4.8e-254 880.9 539 78.7
Glyma.01G192200 Glycine max HOM05D001054 ORTHO05D007110 3.1e-253 878.2 542 79.2
Lsat_1_v5_gn_2_83701 Lactuca sativa HOM05D001054 ORTHO05D007110 7.0e-253 877.1 546 78.4
VMungo1215G2035 Vigna mungo HOM05D001054 ORTHO05D007110 9.1e-253 876.7 539 79.2
Medtr5g016070 Medicago truncatula HOM05D001054 ORTHO05D007110 1.2e-252 876.3 541 78.7
Lalb_Chr09g0323511 Lupinus albus HOM05D001054 ORTHO05D007110 1.5e-250 869.4 550 77.3
Hund13932 Selenicereus undatus HOM05D001054 ORTHO05D007110 3.2e-250 868.2 544 77.6
Ca_24720_v3 Cicer arietinum L. HOM05D001054 ORTHO05D007110 1.6e-249 865.9 489 83.4
SGA_v2.0_scaffold15G07420 Striga asiatica HOM05D001054 ORTHO05D007110 2.3e-248 862.1 520 79.0
arahy.Tifrunner.gnm1.ann1.5YK3TE Arachis hypogaea HOM05D001054 ORTHO05D007110 1.5e-247 859.4 542 76.4
CSS0030463 Camellia sinensis var. sinensis HOM05D001054 ORTHO05D007110 8.3e-246 853.6 517 79.5
unitig_0.g506 Utricularia gibba HOM05D001054 ORTHO05D007110 8.3e-246 853.6 469 85.3
arahy.Tifrunner.gnm1.ann1.AR4BCX Arachis hypogaea HOM05D001054 ORTHO05D007110 6.1e-241 837.4 552 76.1
arahy.Tifrunner.gnm1.ann1.S94KHE Arachis hypogaea HOM05D001054 ORTHO05D007110 6.1e-241 837.4 567 74.6
arahy.Tifrunner.gnm1.ann1.UKA06W Arachis hypogaea HOM05D001054 ORTHO05D007110 6.1e-241 837.4 552 75.9
arahy.Tifrunner.gnm1.ann1.V4EKGG Arachis hypogaea HOM05D001054 ORTHO05D007110 6.8e-240 833.9 567 74.4
Os01g0810100 Oryza sativa ssp. japonica HOM05D001054 ORTHO05D007110 8.9e-240 833.6 483 80.5
arahy.Tifrunner.gnm1.ann1.SB8Z2H Arachis hypogaea HOM05D001054 ORTHO05D007110 3.4e-239 831.6 564 72.3
HPP92_018502 Vanilla planifolia HOM05D001054 ORTHO05D007110 2.8e-238 828.6 532 74.8
Lj4g0019986 Lotus japonicus HOM05D001054 ORTHO05D007110 3.1e-237 825.1 543 74.0
VMungo0251G1033 Vigna mungo HOM05D001054 ORTHO05D007110 5.4e-237 824.3 542 74.9
Phvul.003G236900 Phaseolus vulgaris HOM05D001054 ORTHO05D007110 1.5e-234 816.2 542 74.0
TPR.G23864 Trifolium pratense HOM05D001054 ORTHO05D007110 1.3e-222 776.5 541 69.9
Medtr4g095410 Medicago truncatula HOM05D001054 ORTHO05D007110 1.4e-221 773.1 527 71.9
HPP92_017544 Vanilla planifolia HOM05D001054 ORTHO05D007110 3.2e-221 771.9 478 75.7
Ah.02g125600 Amaranthus hybridus HOM05D001054 ORTHO05D007110 6.8e-216 754.2 426 82.2
Gohir.A12G075200 Gossypium hirsutum HOM05D001054 ORTHO05D007110 2.3e-211 739.2 436 82.1
ECA238G1085 Erigeron canadensis HOM05D001054 ORTHO05D007110 6.2e-209 731.1 398 83.9
Zm00001eb150280 Zea mays HOM05D001054 ORTHO05D007110 1.4e-208 729.9 473 73.8
Dinv26904 Davidia involucrata HOM05D001054 ORTHO05D007110 1.4e-200 703.4 407 82.1
Actinidia36442 Actinidia chinensis HOM05D001054 ORTHO05D007110 1.3e-195 686.8 518 66.6
Psat4g083600 Pisum sativum HOM05D001054 ORTHO05D007110 3.4e-191 672.2 398 77.4
CSS0024742 Camellia sinensis var. sinensis HOM05D001054 ORTHO05D007110 9.0e-184 647.5 332 89.5
AL5G41245 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 2.2e-166 589.7 405 74.6
Mapoly0005s0153 Marchantia polymorpha HOM05D001054 ORTHO05D007110 1.9e-157 560.1 452 59.7
GSVIVG01000148001 Vitis vinifera HOM05D001054 ORTHO05D007110 4.4e-154 548.9 283 89.0
Pp3c5_10700 Physcomitrium patens HOM05D001054 ORTHO05D007110 7.4e-154 548.1 477 56.6
HPP92_017568 Vanilla planifolia HOM05D001054 ORTHO05D007110 1.1e-152 544.3 418 66.5
vmacro05387 Vaccinium macrocarpon HOM05D001054 ORTHO05D007110 1.4e-139 500.7 346 70.2
SEGI_29234 Sequoiadendron giganteum HOM05D001054 ORTHO05D007110 2.0e-138 496.9 364 65.4
SMO119G0428 Selaginella moellendorffii HOM05D001054 ORTHO05D007110 2.5e-133 479.9 451 53.4
AagrBONN_evm.TU.Sc2ySwM_368.879 Anthoceros agrestis HOM05D001054 ORTHO05D007110 9.4e-133 478.0 451 53.4
Glyma.05G104100 Glycine max HOM05D001054 ORTHO05D007110 8.3e-129 464.9 341 69.5
vmacro05388 Vaccinium macrocarpon HOM05D001054 ORTHO05D007110 4.0e-115 419.5 269 75.5
FAN28G0670 Fragaria x ananassa HOM05D001054 ORTHO05D007110 1.1e-96 358.2 234 76.1
MD15G1293700 Malus domestica HOM05D001054 ORTHO05D007110 7.8e-95 352.1 181 89.5
Duzib147G0207 Durio zibethinus HOM05D001054 ORTHO05D007110 8.9e-91 338.6 182 89.0
AL7G13080 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 9.6e-77 292.0 172 79.7
SEGI_10508 Sequoiadendron giganteum HOM05D001054 ORTHO05D007110 2.6e-58 230.7 135 77.0
Actinidia11996 Actinidia chinensis HOM05D001054 ORTHO05D007110 8.8e-46 189.1 117 77.8
Eucgr.C03694 Eucalyptus grandis HOM05D001054 ORTHO05D026867 4.8e-44 183.3 102 81.4
Actinidia11995 Actinidia chinensis HOM05D001054 ORTHO05D038022 5.9e-34 149.8 81 85.2
Oeu038701.1 Olea europaea HOM05D001054 ORTHO05D038022 1.7e-28 131.7 68 86.8
AT2G48121 Arabidopsis thaliana HOM05D001054 ORTHO05D026867 6.8e-22 109.8 58 86.2
A03p65210 Brassica napus HOM05D001054 ORTHO05D026867 2.0e-21 108.2 60 81.7
BraA03t15579Z Brassica rapa HOM05D001054 ORTHO05D026867 2.0e-21 108.2 60 81.7
C07p62420 Brassica napus HOM05D001054 ORTHO05D007110 1.1e-19 102.4 53 86.8
BcaNung02059 Brassica carinata HOM05D001054 ORTHO05D007110 3.5e-18 97.4 50 86.0
Sed0007349 Sechium edule HOM05D001054 ORTHO05D007110 3.0e-14 84.3 78 55.1


User provided reference genes

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