Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc58.53 Carica papaya HOM05D006635 ORTHO05D008047 9.7e-124 446.8 225 100.0
Thecc.04G246700 Theobroma cacao HOM05D006635 ORTHO05D008047 2.4e-90 335.9 215 79.1
COL.COLO4_15799 Corchorus olitorius HOM05D006635 ORTHO05D008047 3.2e-90 335.5 218 77.1
Haze_11307 Corylus avellana HOM05D006635 ORTHO05D008047 4.1e-90 335.1 221 75.1
GSVIVG01018125001 Vitis vinifera HOM05D006635 ORTHO05D008047 4.1e-90 335.1 218 78.0
Gohir.D10G153800 Gossypium hirsutum HOM05D006635 ORTHO05D008047 1.2e-89 333.6 216 78.2
Gorai.011G171700 Gossypium raimondii HOM05D006635 ORTHO05D008047 1.2e-89 333.6 216 78.2
Haze_11310 Corylus avellana HOM05D006635 ORTHO05D008047 1.6e-89 333.2 221 74.7
Cfa008372 Carpinus fangiana HOM05D003636 ORTHO05D005160 2.0e-89 332.8 221 75.1
CSS0008878 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 3.5e-89 332.0 229 73.8
Manes.15G037200 Manihot esculenta HOM05D006635 ORTHO05D008047 1.3e-88 330.1 219 75.8
Gohir.A10G113600 Gossypium hirsutum HOM05D006635 ORTHO05D008047 3.0e-88 328.9 216 77.3
Hma1.2p1_0650F.1_g195460 Hydrangea macrophylla HOM05D006635 ORTHO05D008047 3.9e-88 328.6 225 75.1
Actinidia08441 Actinidia chinensis HOM05D006635 ORTHO05D008047 1.9e-87 326.2 225 75.1
Ciclev10005690m.g Citrus clementina HOM05D006635 ORTHO05D008047 1.9e-87 326.2 219 75.3
CANSAT78G1035 Cannabis sativa HOM05D006635 ORTHO05D008047 9.5e-87 323.9 221 74.7
CiPaw.01G189900 Carya illinoinensis HOM05D006635 ORTHO05D008047 2.1e-86 322.8 219 74.9
Eucgr.H03153 Eucalyptus grandis HOM05D006635 ORTHO05D008047 2.1e-86 322.8 227 72.7
TWI53G1330 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 2.1e-86 322.8 224 73.7
TWI53G1448 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 2.1e-86 322.8 224 73.7
Potri.010G075900 Populus trichocarpa HOM05D006635 ORTHO05D008047 8.1e-86 320.9 220 71.8
Dinv29905 Davidia involucrata HOM05D006635 ORTHO05D008047 1.1e-85 320.5 214 74.8
arahy.Tifrunner.gnm1.ann1.20YP49 Arachis hypogaea HOM05D006635 ORTHO05D008047 1.4e-85 320.1 223 71.3
arahy.Tifrunner.gnm1.ann1.P8HXAC Arachis hypogaea HOM05D006635 ORTHO05D008047 3.1e-85 318.9 223 70.9
Ciclev10005689m.g Citrus clementina HOM05D006635 ORTHO05D008047 4.0e-85 318.5 217 75.1
Aqoxy5G00314 Aquilegia oxysepala HOM05D006635 ORTHO05D008047 5.2e-85 318.2 226 69.9
THA.LOC104808600 Tarenaya hassleriana HOM05D006635 ORTHO05D008047 1.2e-84 317.0 219 73.1
Prupe.1G031500 Prunus persica HOM05D006635 ORTHO05D008047 4.4e-84 315.1 226 70.4
MD13G1208000 Malus domestica HOM05D006635 ORTHO05D008047 5.8e-84 314.7 223 71.3
Sc19g0003750 Simmondsia chinensis HOM05D006635 ORTHO05D008047 1.3e-83 313.5 230 68.3
Atru.chr4.2211 Acer truncatum HOM05D006635 ORTHO05D008047 2.2e-83 312.8 217 71.9
RcHm_v2.0_Chr1g0323991 Rosa chinensis HOM05D006635 ORTHO05D008047 2.9e-83 312.4 224 70.5
CAN.G118.6 Capsicum annuum HOM05D006635 ORTHO05D008047 3.7e-83 312.0 223 72.2
Lalb_Chr02g0150381 Lupinus albus HOM05D006635 ORTHO05D008047 1.1e-82 310.5 229 69.0
FvH4_2g07190 Fragaria vesca HOM05D006635 ORTHO05D008047 1.4e-82 310.1 219 70.8
FAN24G3344 Fragaria x ananassa HOM05D006635 ORTHO05D008047 1.9e-82 309.7 219 70.8
Lj6A657T45 Lonicera japonica HOM05D006635 ORTHO05D008047 1.9e-82 309.7 212 71.7
Sc19g0005210 Simmondsia chinensis HOM05D006635 ORTHO05D008047 2.4e-82 309.3 230 67.4
Migut.G00439 Erythranthe guttata HOM05D006635 ORTHO05D008047 5.4e-82 308.1 225 69.8
Solyc06g053770.4 Solanum lycopersicum HOM05D006635 ORTHO05D008047 7.1e-82 307.8 224 69.6
Cc03_g04920 Coffea canephora HOM05D006635 ORTHO05D008047 9.2e-82 307.4 224 70.5
DCAR_027282 Daucus carota HOM05D006635 ORTHO05D008047 1.6e-81 306.6 221 69.7
PGSC0003DMG400016282 Solanum tuberosum HOM05D006635 ORTHO05D008047 2.1e-81 306.2 222 69.8
ECA240G1129 Erigeron canadensis HOM05D000856 ORTHO05D002253 4.6e-81 305.1 222 69.8
Sopen06g018890 Solanum pennellii HOM05D006635 ORTHO05D008047 4.6e-81 305.1 222 69.4
PSO832G2723 Papaver somniferum HOM05D006635 ORTHO05D008047 7.8e-81 304.3 222 69.8
Psat4g107880 Pisum sativum HOM05D006635 ORTHO05D008047 1.0e-80 303.9 220 70.0
FAN20G2319 Fragaria x ananassa HOM05D006635 ORTHO05D008047 1.3e-80 303.5 219 68.9
Lj5g0017333 Lotus japonicus HOM05D006635 ORTHO05D008047 1.3e-80 303.5 221 69.7
PSO210G4915 Papaver somniferum HOM05D006635 ORTHO05D008047 1.3e-80 303.5 219 70.8
Medtr1g075330 Medicago truncatula HOM05D006635 ORTHO05D008047 3.0e-80 302.4 219 68.9
Ca_09839_v3 Cicer arietinum L. HOM05D006635 ORTHO05D008047 3.9e-80 302.0 219 69.4
HPP92_023529 Vanilla planifolia HOM05D006635 ORTHO05D008047 8.6e-80 300.8 223 68.2
AL3G37550 Arabidopsis lyrata HOM05D006635 ORTHO05D008047 1.1e-79 300.4 221 69.2
Nn1g02620 Nelumbo nucifera HOM05D006635 ORTHO05D008047 1.1e-79 300.4 255 64.3
Nitab4.5_0000302g0050 Nicotiana tabacum HOM05D006635 ORTHO05D008047 1.1e-79 300.4 226 69.0
Sed0017322 Sechium edule HOM05D006635 ORTHO05D008047 1.1e-79 300.4 222 68.0
HanXRQChr13g0424511 Helianthus annuus HOM05D006635 ORTHO05D008047 1.9e-79 299.7 219 68.9
MSTRG.4101 Avicennia marina HOM05D006635 ORTHO05D008047 3.3e-79 298.9 210 71.4
vmacro15410 Vaccinium macrocarpon HOM05D006635 ORTHO05D008047 3.3e-79 298.9 256 62.1
AUR62002251 Chenopodium quinoa HOM05D006635 ORTHO05D008047 7.3e-79 297.7 226 68.6
AT3G23100 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 1.2e-78 297.0 221 67.9
Sp3g20780 Schrenkiella parvula HOM05D006635 ORTHO05D008047 2.1e-78 296.2 223 65.9
Ciclev10007171m.g Citrus clementina HOM05D006635 ORTHO05D008047 2.8e-78 295.8 205 73.2
MELO3C018624.2 Cucumis melo HOM05D006635 ORTHO05D008047 2.8e-78 295.8 233 67.0
PGR004G0241 Punica granatum HOM05D006635 ORTHO05D008047 4.7e-78 295.0 226 67.3
ClCG09G015590 Citrullus lanatus HOM05D006635 ORTHO05D008047 6.2e-78 294.7 240 66.2
CsaV3_7G006710 Cucumis sativus L. HOM05D006635 ORTHO05D008047 6.2e-78 294.7 227 67.4
Oeu058885.1 Olea europaea HOM05D006635 ORTHO05D008047 8.1e-78 294.3 243 64.2
Carub.0003s2327 Capsella rubella HOM05D006635 ORTHO05D008047 1.1e-77 293.9 224 66.1
CARHR099010 Cardamine hirsuta HOM05D006635 ORTHO05D008047 1.2e-76 290.4 216 69.0
Duzib151G0047 Durio zibethinus HOM05D006635 ORTHO05D008047 1.2e-76 290.4 216 71.8
Nitab4.5_0008721g0010 Nicotiana tabacum HOM05D006635 ORTHO05D008047 1.2e-76 290.4 212 70.3
FAN27G3431 Fragaria x ananassa HOM05D006635 ORTHO05D008047 7.6e-76 287.7 245 62.4
CDE04G0173 Ceratophyllum demersum HOM05D006635 ORTHO05D008047 1.1e-74 283.9 222 65.8
Glyma.10G184800 Glycine max HOM05D006635 ORTHO05D008047 3.2e-74 282.3 222 64.0
QL06p015844 Quercus lobata HOM05D006635 ORTHO05D008047 5.4e-74 281.6 312 51.0
Glyma.20G205600 Glycine max HOM05D006635 ORTHO05D008047 1.2e-73 280.4 222 64.0
BcaB04g20471 Brassica carinata HOM05D006635 ORTHO05D008047 2.1e-73 279.6 207 66.2
BcaC09g49245 Brassica carinata HOM05D006635 ORTHO05D008047 7.8e-73 277.7 221 63.8
Hund11856 Selenicereus undatus HOM05D006635 ORTHO05D008047 1.0e-72 277.3 216 67.6
Ah.13g066120 Amaranthus hybridus HOM05D006635 ORTHO05D008047 1.9e-71 273.1 222 61.7
A01p31980 Brassica napus HOM05D006635 ORTHO05D008047 2.5e-71 272.7 195 67.7
BraA01t03324Z Brassica rapa HOM05D006635 ORTHO05D008047 2.5e-71 272.7 195 67.7
Phvul.007G125600 Phaseolus vulgaris HOM05D006635 ORTHO05D008047 5.6e-71 271.6 227 62.1
Zm00001eb056730 Zea mays HOM05D006635 ORTHO05D008047 1.2e-70 270.4 235 59.6
ATR0824G049 Amborella trichopoda HOM05D006635 ORTHO05D008047 1.6e-70 270.0 223 61.0
CSS0031458 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 1.2e-68 263.8 255 58.4
Os03g0740800 Oryza sativa ssp. japonica HOM05D006635 ORTHO05D008047 9.9e-68 260.8 225 58.2
BolC1t04048H Brassica oleracea HOM05D006635 ORTHO05D008047 6.4e-67 258.1 178 68.0
VMungo0720G1578 Vigna mungo HOM05D006635 ORTHO05D008047 8.4e-67 257.7 227 60.4
Peaxi162Scf00325g00713 Petunia axillaris HOM05D006635 ORTHO05D008047 1.4e-66 256.9 230 60.9
EL10Ac3g05891 Beta vulgaris HOM05D006635 ORTHO05D008047 1.9e-66 256.5 227 60.8
Aa31LG8G9580 Aethionema arabicum HOM05D006635 ORTHO05D008047 5.4e-66 255.0 222 60.8
Thhalv10022194m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 2.3e-64 249.6 223 59.6
Sabra10G0032800 Salix brachista HOM05D006635 ORTHO05D008047 2.1e-62 243.0 413 38.7
Lsat_1_v5_gn_3_122920 Lactuca sativa HOM05D006635 ORTHO05D008047 3.1e-61 239.2 196 63.8
MBI19_g38372_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 8.7e-56 221.1 223 58.3
C01p40990 Brassica napus HOM05D006635 ORTHO05D008047 6.2e-54 214.9 137 70.1
PGR004G0922 Punica granatum HOM05D006635 ORTHO05D008047 2.5e-47 193.0 159 61.0
PGR102G1543 Punica granatum HOM05D006635 ORTHO05D008047 2.9e-43 179.5 226 48.2
Mapoly0014s0074 Marchantia polymorpha HOM05D006635 ORTHO05D008047 1.6e-41 173.7 201 45.8
AUR62015462 Chenopodium quinoa HOM05D006635 ORTHO05D008047 2.9e-35 152.9 147 61.2
TPR.G27195 Trifolium pratense HOM05D006635 ORTHO05D008047 2.5e-31 139.8 92 68.5
AagrBONN_evm.TU.Sc2ySwM_228.5661 Anthoceros agrestis HOM05D006635 ORTHO05D008047 9.7e-31 137.9 214 36.9
TAR636G2119 Trochodendron aralioides HOM05D006635 ORTHO05D008047 2.8e-30 136.3 98 65.3
PGR083G1020 Punica granatum HOM05D006635 ORTHO05D008047 6.3e-30 135.2 228 39.9
Ciclev10029925m.g Citrus clementina HOM05D006635 ORTHO05D008047 1.4e-29 134.0 133 54.1
Pp3c14_21160 Physcomitrium patens HOM05D006635 ORTHO05D008047 1.4e-26 124.0 208 35.6
TAR636G0517 Trochodendron aralioides HOM05D006635 ORTHO05D008047 1.0e-24 117.9 88 78.4
Pp3c1_38430 Physcomitrium patens HOM05D006635 ORTHO05D008047 1.3e-22 110.9 230 30.9
MBI19_g44428_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 1.8e-21 107.1 131 49.6
SEGI_11171 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 3.4e-20 102.8 88 53.4
Oeu058884.1 Olea europaea HOM05D001680 ORTHO05D001596 1.2e-17 94.4 111 54.1
CBR_g33918 Chara braunii HOM05D006635 ORTHO05D008047 2.1e-17 93.6 156 37.8
AT1G61410 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 2.3e-16 90.1 92 59.8
SEGI_02340 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 8.8e-16 88.2 88 60.2
Pp3c1_15160 Physcomitrium patens HOM05D000160 ORTHO05D316923 2.4e-13 80.1 138 31.2
Thhalv10021924m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 4.1e-13 79.3 86 57.0
C01p40970 Brassica napus HOM05D006635 ORTHO05D008047 9.1e-13 78.2 55 60.0
C01p40960 Brassica napus HOM05D006635 ORTHO05D008047 1.1e-10 71.2 86 51.2
Pp3c13_7410 Physcomitrium patens HOM05D000160 ORTHO05D000496 4.0e-08 62.8 159 28.3
Pp3c3_5070 Physcomitrium patens HOM05D000160 ORTHO05D000496 5.2e-08 62.4 150 25.3
unitig_747.g21677 Utricularia gibba HOM05D006635 ORTHO05D008047 6.3e-06 55.5 51 45.1


User provided reference genes

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