Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc3138.1 Carica papaya HOM05D000113 ORTHO05D015269 2.5e-78 295.4 153 100.0
Dinv01272 Davidia involucrata HOM05D000113 ORTHO05D007237 3.8e-55 218.4 153 74.5
Actinidia15505 Actinidia chinensis HOM05D000113 ORTHO05D007237 4.4e-51 204.9 153 68.0
Dinv24631 Davidia involucrata HOM05D000113 ORTHO05D007237 1.3e-50 203.4 154 72.1
Peaxi162Scf00359g01116 Petunia axillaris HOM05D000113 ORTHO05D007237 1.7e-50 203.0 153 66.7
Thecc.01G166900 Theobroma cacao HOM05D000113 ORTHO05D007237 2.2e-50 202.6 153 68.6
Nitab4.5_0001552g0100 Nicotiana tabacum HOM05D000113 ORTHO05D007237 4.8e-50 201.4 153 66.7
Solyc07g044930.3 Solanum lycopersicum HOM05D000113 ORTHO05D007237 1.1e-49 200.3 153 66.7
Sopen07g023470 Solanum pennellii HOM05D000113 ORTHO05D007237 3.1e-49 198.7 153 66.7
Nitab4.5_0009366g0030 Nicotiana tabacum HOM05D000113 ORTHO05D007237 5.4e-49 198.0 153 66.0
CAN.G212.12 Capsicum annuum HOM05D000113 ORTHO05D007237 1.6e-48 196.4 153 66.0
CSS0031269 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D007237 2.7e-48 195.7 153 64.7
COL.COLO4_29885 Corchorus olitorius HOM05D000113 ORTHO05D007237 2.7e-48 195.7 153 65.4
MSTRG.14893 Avicennia marina HOM05D000113 ORTHO05D007237 7.7e-48 194.1 153 66.0
Atru.chr6.2018 Acer truncatum HOM05D000113 ORTHO05D007237 8.5e-47 190.7 153 66.7
Ciclev10033885m.g Citrus clementina HOM05D000113 ORTHO05D007237 1.9e-46 189.5 153 69.3
QL08p045486 Quercus lobata HOM05D000113 ORTHO05D007237 5.5e-46 188.0 153 64.7
Hma1.2p1_0571F.1_g180920 Hydrangea macrophylla HOM05D000113 ORTHO05D015269 7.2e-46 187.6 153 66.7
CiPaw.03G197700 Carya illinoinensis HOM05D000113 ORTHO05D007237 9.4e-46 187.2 153 64.7
Cc05_g00880 Coffea canephora HOM05D000113 ORTHO05D007237 1.2e-45 186.8 153 64.7
Gohir.A05G380800 Gossypium hirsutum HOM05D000113 ORTHO05D007237 1.6e-45 186.4 153 63.4
Gohir.D04G034800 Gossypium hirsutum HOM05D000113 ORTHO05D007237 2.3e-44 182.6 153 62.1
Sabra05G0157000 Salix brachista HOM05D000113 ORTHO05D007237 5.2e-44 181.4 153 63.4
TAR627G1069 Trochodendron aralioides HOM05D000113 ORTHO05D015269 6.8e-44 181.0 150 64.7
Gorai.012G039300 Gossypium raimondii HOM05D000113 ORTHO05D007237 8.8e-44 180.6 153 61.4
Potri.005G206500 Populus trichocarpa HOM05D000113 ORTHO05D007237 1.5e-43 179.9 153 64.1
Cfa023019 Carpinus fangiana HOM05D000113 ORTHO05D007237 4.9e-42 174.9 153 62.7
Oeu012355.1 Olea europaea HOM05D000113 ORTHO05D007237 6.3e-42 174.5 153 60.1
GSVIVG01020822001 Vitis vinifera HOM05D000113 ORTHO05D007237 1.4e-41 173.3 153 64.7
Oeu033551.1 Olea europaea HOM05D000113 ORTHO05D007237 1.8e-41 172.9 153 61.4
Nn7g38061 Nelumbo nucifera HOM05D000113 ORTHO05D007237 2.4e-41 172.6 154 62.3
DCAR_023041 Daucus carota HOM05D000113 ORTHO05D015269 9.2e-41 170.6 153 60.1
ClCG07G010790 Citrullus lanatus HOM05D000113 ORTHO05D007237 1.6e-40 169.9 153 58.8
TAR626G1249 Trochodendron aralioides HOM05D000113 ORTHO05D007237 4.5e-40 168.3 155 58.7
SGA_v2.0_scaffold73G24473 Striga asiatica HOM05D001610 ORTHO05D007237 5.9e-40 167.9 153 60.1
HanXRQChr06g0170911 Helianthus annuus HOM05D000113 ORTHO05D007237 7.7e-40 167.5 155 61.3
Eucgr.A02036 Eucalyptus grandis HOM05D000113 ORTHO05D007237 1.3e-39 166.8 154 57.1
Migut.M00079 Erythranthe guttata HOM05D000113 ORTHO05D007237 2.3e-39 166.0 153 60.8
Rhsim09G0210000 Rhododendron simsii HOM05D000113 ORTHO05D007237 2.3e-39 166.0 139 62.6
CsaV3_4G007530 Cucumis sativus L. HOM05D000113 ORTHO05D007237 5.0e-39 164.9 153 59.5
arahy.Tifrunner.gnm1.ann1.JYPQ9N Arachis hypogaea HOM05D000113 ORTHO05D007237 6.6e-39 164.5 153 57.5
Duzib147G1700 Durio zibethinus HOM05D000113 ORTHO05D007237 8.6e-39 164.1 126 66.7
arahy.Tifrunner.gnm1.ann1.UENS5B Arachis hypogaea HOM05D000113 ORTHO05D007237 1.9e-38 162.9 153 57.5
Lalb_Chr17g0348141 Lupinus albus HOM05D000113 ORTHO05D007237 5.6e-38 161.4 153 58.2
TWI23G1117 Tripterygium wilfordii HOM05D000113 ORTHO05D007237 9.5e-38 160.6 153 57.5
Phvul.008G196300 Phaseolus vulgaris HOM05D000113 ORTHO05D007237 2.1e-37 159.5 153 57.5
SalBow7G3963 Salvia bowleyana HOM05D000113 ORTHO05D007237 2.1e-37 159.5 153 54.9
Aqoxy1G01493 Aquilegia oxysepala HOM05D000113 ORTHO05D007237 3.6e-37 158.7 158 58.9
Sed0010586 Sechium edule HOM05D000113 ORTHO05D007237 3.6e-37 158.7 144 56.2
VMungo0647G0573 Vigna mungo HOM05D000113 ORTHO05D007237 1.4e-36 156.8 153 56.2
Prupe.3G179000 Prunus persica HOM05D000113 ORTHO05D007237 4.0e-36 155.2 153 53.6
MD09G1146500 Malus domestica HOM05D000113 ORTHO05D007237 1.5e-35 153.3 151 55.6
Lsat_1_v5_gn_3_36540 Lactuca sativa HOM05D000113 ORTHO05D007237 2.0e-35 152.9 155 57.4
ECA246G4989 Erigeron canadensis HOM05D001982 ORTHO05D007237 1.7e-34 149.8 155 54.8
TPR.G8771 Trifolium pratense HOM05D000113 ORTHO05D007237 2.9e-34 149.1 153 54.2
unitig_0.g756 Utricularia gibba HOM05D000113 ORTHO05D007237 2.9e-34 149.1 154 52.6
Os01g0767700 Oryza sativa ssp. japonica HOM05D000113 ORTHO05D007237 1.1e-33 147.1 153 52.3
Glyma.02G282700 Glycine max HOM05D000113 ORTHO05D007237 2.4e-33 146.0 153 52.9
MBI01_g38586_MAGBIO Magnolia biondii HOM05D000113 ORTHO05D015269 2.4e-33 146.0 143 56.6
Glyma.14G031600 Glycine max HOM05D000113 ORTHO05D007237 5.4e-33 144.8 155 54.8
ATR0763G161 Amborella trichopoda HOM05D000113 ORTHO05D007237 1.2e-32 143.7 155 52.3
DCAR_016938 Daucus carota HOM05D000113 ORTHO05D015269 1.2e-32 143.7 153 52.3
Psat2g018200 Pisum sativum HOM05D000113 ORTHO05D007237 1.2e-32 143.7 153 51.0
LjContig00049g0026408 Lotus japonicus HOM05D000113 ORTHO05D007237 1.6e-32 143.3 153 53.6
THA.LOC104800815 Tarenaya hassleriana HOM05D000113 ORTHO05D007237 1.6e-32 143.3 157 50.3
BraA05t20407Z Brassica rapa HOM05D000113 ORTHO05D007237 2.7e-32 142.5 157 51.6
CANSAT64G2939 Cannabis sativa HOM05D000113 ORTHO05D007237 4.6e-32 141.7 154 54.5
A05p14770 Brassica napus HOM05D000113 ORTHO05D007237 7.8e-32 141.0 157 51.0
Lj8A98T44 Lonicera japonica HOM05D000113 ORTHO05D007237 7.8e-32 141.0 169 50.3
Ca_06237_v3 Cicer arietinum L. HOM05D000113 ORTHO05D007237 1.0e-31 140.6 153 52.3
BolC5t29258H Brassica oleracea HOM05D000113 ORTHO05D007237 5.0e-31 138.3 155 49.0
Thhalv10016152m.g Eutrema salsugineum HOM05D000113 ORTHO05D007237 8.6e-31 137.5 159 47.2
HPP92_000953 Vanilla planifolia HOM05D000113 ORTHO05D007237 8.6e-31 137.5 154 49.4
RcHm_v2.0_Chr2g0152461 Rosa chinensis HOM05D000113 ORTHO05D007237 1.1e-30 137.1 153 49.0
Sc07g0004270 Simmondsia chinensis HOM05D000113 ORTHO05D007237 1.9e-30 136.3 174 48.9
C05p04860 Brassica napus HOM05D000113 ORTHO05D007237 2.5e-30 136.0 155 47.7
SEGI_34167 Sequoiadendron giganteum HOM05D000113 ORTHO05D015269 3.3e-30 135.6 155 52.3
AL4G25730 Arabidopsis lyrata HOM05D000113 ORTHO05D007237 4.3e-30 135.2 159 47.2
CARHR124270 Cardamine hirsuta HOM05D000113 ORTHO05D007237 7.3e-30 134.4 159 47.2
Zm00001eb370170 Zea mays HOM05D000113 ORTHO05D007237 9.5e-30 134.0 155 51.6
AT2G30800 Arabidopsis thaliana HOM05D000113 ORTHO05D007237 1.6e-29 133.3 159 47.2
A04p23480 Brassica napus HOM05D000113 ORTHO05D007237 2.1e-29 132.9 159 46.5
BraA04t17875Z Brassica rapa HOM05D000113 ORTHO05D007237 3.6e-29 132.1 159 47.2
Medtr5g090430 Medicago truncatula HOM05D000113 ORTHO05D007237 4.7e-29 131.7 153 49.0
Hund04309 Selenicereus undatus HOM05D000113 ORTHO05D015269 4.7e-29 131.7 142 51.4
C04p59790 Brassica napus HOM05D000113 ORTHO05D007237 6.2e-29 131.3 160 46.2
BolC4t27489H Brassica oleracea HOM05D000113 ORTHO05D007237 6.2e-29 131.3 160 46.2
BcaB06g28386 Brassica carinata HOM05D000113 ORTHO05D007237 1.4e-28 130.2 156 48.1
AUR62003434 Chenopodium quinoa HOM05D000113 ORTHO05D007237 1.4e-28 130.2 172 47.1
HanXRQChr17g0541371 Helianthus annuus HOM05D000113 ORTHO05D007237 2.3e-28 129.4 171 45.6
Carub.0004s1201 Capsella rubella HOM05D000113 ORTHO05D007237 6.8e-28 127.9 159 45.3
FAN02G0673 Fragaria x ananassa HOM05D000113 ORTHO05D007237 6.8e-28 127.9 153 47.7
BcaB02g10343 Brassica carinata HOM05D000113 ORTHO05D007237 8.9e-28 127.5 159 45.3
AUR62029411 Chenopodium quinoa HOM05D000113 ORTHO05D007237 8.9e-28 127.5 173 46.2
HanXRQChr17g0541351 Helianthus annuus HOM05D000113 ORTHO05D007237 8.9e-28 127.5 181 44.2
FvH4_6g38870 Fragaria vesca HOM05D000113 ORTHO05D007237 2.6e-27 125.9 153 47.1
FAN09G2677 Fragaria x ananassa HOM05D000113 ORTHO05D007237 2.6e-27 125.9 153 47.7
Phvul.006G027200 Phaseolus vulgaris HOM05D000113 ORTHO05D007237 2.6e-27 125.9 133 48.9
TAR626G1057 Trochodendron aralioides HOM05D000113 ORTHO05D015269 3.7e-26 122.1 125 55.2
PSO223G0056 Papaver somniferum HOM05D000113 ORTHO05D007237 6.4e-26 121.3 155 47.7
Sp1g05400 Schrenkiella parvula HOM05D000113 ORTHO05D007237 6.4e-26 121.3 171 43.3
vmacro10163 Vaccinium macrocarpon HOM05D000113 ORTHO05D007237 6.4e-26 121.3 157 47.1
Thhalv10006566m.g Eutrema salsugineum HOM05D000113 ORTHO05D007237 8.3e-26 120.9 175 42.9
PSO210G5614 Papaver somniferum HOM05D000113 ORTHO05D007237 1.1e-25 120.6 155 47.7
Aa31LG5G6060 Aethionema arabicum HOM05D000113 ORTHO05D007237 2.0e-24 116.3 164 42.7
Carub.0001s0600 Capsella rubella HOM05D000113 ORTHO05D007237 1.0e-23 114.0 182 42.3
AL1G16680 Arabidopsis lyrata HOM05D000113 ORTHO05D007237 1.7e-23 113.2 191 40.8
FAN05G5230 Fragaria x ananassa HOM05D000113 ORTHO05D007237 4.3e-22 108.6 187 38.5
FAN14G0921 Fragaria x ananassa HOM05D000113 ORTHO05D007237 4.3e-22 108.6 187 38.5
AT1G06670 Arabidopsis thaliana HOM05D000113 ORTHO05D007237 5.6e-22 108.2 195 39.0
Manes.01G132300 Manihot esculenta HOM05D000113 ORTHO05D007237 5.6e-22 108.2 74 75.7
CDE02G4043 Ceratophyllum demersum HOM05D000113 ORTHO05D007237 7.3e-22 107.8 141 46.8
AagrBONN_evm.TU.Sc2ySwM_344.1049 Anthoceros agrestis HOM05D000113 ORTHO05D007237 4.7e-21 105.1 154 45.5
SHI10522 Sapria himalayana HOM05D000113 ORTHO05D015269 4.7e-21 105.1 122 46.7
CARHR006350 Cardamine hirsuta HOM05D000113 ORTHO05D007237 5.2e-20 101.7 163 41.1
Mapoly0007s0204 Marchantia polymorpha HOM05D000113 ORTHO05D007237 3.4e-19 99.0 161 41.6
Pp3c11_11510 Physcomitrium patens HOM05D000113 ORTHO05D007237 2.9e-18 95.9 163 39.3
Ah.03g147070 Amaranthus hybridus HOM05D000113 ORTHO05D015269 6.4e-18 94.7 179 36.9
CBR_g50388 Chara braunii HOM05D000113 ORTHO05D007237 5.1e-15 85.1 153 39.2
Lj2g0018192 Lotus japonicus HOM05D000113 ORTHO05D007237 4.4e-11 72.0 73 54.8
Lj1C638T13 Lonicera japonica HOM05D000113 ORTHO05D007237 2.4e-09 66.2 40 85.0
PRCOL_00004730 Prasinoderma coloniale HOM05D000113 ORTHO05D007237 6.6e-07 58.2 163 30.7
SMO165G0077 Selaginella moellendorffii HOM05D000113 ORTHO05D007237 9.6e-06 54.3 41 58.5


User provided reference genes

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