Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc2800.1 Carica papaya HOM05D005545 ORTHO05D006917 6.1e-42 173.7 87 100.0
CiPaw.13G013000 Carya illinoinensis HOM05D005545 ORTHO05D006917 1.3e-31 139.4 85 78.8
Cfa010879 Carpinus fangiana HOM05D005545 ORTHO05D006917 1.7e-31 139.0 87 77.0
Atru.chr12.1348 Acer truncatum HOM05D005545 ORTHO05D006917 3.7e-31 137.9 82 84.1
Dinv32030 Davidia involucrata HOM05D005545 ORTHO05D006917 4.9e-31 137.5 87 75.9
MD07G1038300 Malus domestica HOM05D005545 ORTHO05D006917 1.1e-30 136.3 85 77.6
CSS0017863 Camellia sinensis var. sinensis HOM05D005545 ORTHO05D006917 1.9e-30 135.6 84 76.2
CSS0046105 Camellia sinensis var. sinensis HOM05D005545 ORTHO05D006917 1.9e-30 135.6 84 76.2
MD02G1288500 Malus domestica HOM05D005545 ORTHO05D006917 1.9e-30 135.6 85 76.5
QL04p014793 Quercus lobata HOM05D005545 ORTHO05D006917 3.2e-30 134.8 85 77.6
QL04p018188 Quercus lobata HOM05D005545 ORTHO05D006917 3.2e-30 134.8 85 77.6
TWI63G0062 Tripterygium wilfordii HOM05D005545 ORTHO05D006917 3.2e-30 134.8 87 75.9
Thecc.10G162000 Theobroma cacao HOM05D005545 ORTHO05D006917 4.1e-30 134.4 84 79.8
Ciclev10004162m.g Citrus clementina HOM05D005545 ORTHO05D006917 5.4e-30 134.0 84 77.4
Duzib114G0439 Durio zibethinus HOM05D005545 ORTHO05D006917 5.4e-30 134.0 81 82.7
Prupe.2G034500 Prunus persica HOM05D005545 ORTHO05D006917 5.4e-30 134.0 83 75.9
vmacro13750 Vaccinium macrocarpon HOM05D005545 ORTHO05D006917 9.2e-30 133.3 78 82.1
COL.COLO4_21694 Corchorus olitorius HOM05D005545 ORTHO05D006917 1.6e-29 132.5 84 76.2
Actinidia10163 Actinidia chinensis HOM05D005545 ORTHO05D006917 4.6e-29 131.0 87 72.4
Gohir.A05G400900 Gossypium hirsutum HOM05D005545 ORTHO05D006917 4.6e-29 131.0 84 78.6
SGA_v2.0_scaffold319G48544 Striga asiatica HOM05D005545 ORTHO05D006917 7.8e-29 130.2 87 72.4
Nn2g14866 Nelumbo nucifera HOM05D005545 ORTHO05D006917 1.3e-28 129.4 83 75.9
Nn7g36650 Nelumbo nucifera HOM05D005545 ORTHO05D006917 1.3e-28 129.4 87 72.4
Lj9A655T39 Lonicera japonica HOM05D005545 ORTHO05D006917 2.3e-28 128.6 82 76.8
TAR636G1823 Trochodendron aralioides HOM05D005545 ORTHO05D006917 2.3e-28 128.6 87 75.9
Gohir.D04G014900 Gossypium hirsutum HOM05D005545 ORTHO05D006917 3.0e-28 128.3 84 76.2
Gorai.012G017400 Gossypium raimondii HOM05D005545 ORTHO05D006917 3.0e-28 128.3 84 76.2
SGA_v2.0_scaffold124G33619 Striga asiatica HOM05D005545 ORTHO05D006917 8.6e-28 126.7 87 72.4
CANSAT56G1029 Cannabis sativa HOM05D005545 ORTHO05D006917 1.1e-27 126.3 87 70.1
Haze_03077 Corylus avellana HOM05D005545 ORTHO05D006917 1.1e-27 126.3 81 75.3
SalBow5G5421 Salvia bowleyana HOM05D005545 ORTHO05D006917 1.5e-27 125.9 89 69.7
RcHm_v2.0_Chr1g0323921 Rosa chinensis HOM05D005545 ORTHO05D006917 2.5e-27 125.2 83 72.3
MSTRG.20517 Avicennia marina HOM05D005545 ORTHO05D006917 9.5e-27 123.2 84 70.2
Cc00_g05310 Coffea canephora HOM05D005545 ORTHO05D006917 9.5e-27 123.2 87 67.8
Aqoxy2G00348 Aquilegia oxysepala HOM05D005545 ORTHO05D006917 1.2e-26 122.9 86 70.9
Sopen11g001260 Solanum pennellii HOM05D005545 ORTHO05D006917 2.1e-26 122.1 87 71.3
ClCG05G026770 Citrullus lanatus HOM05D005545 ORTHO05D006917 2.8e-26 121.7 83 67.5
DCAR_003247 Daucus carota HOM05D005545 ORTHO05D006917 2.8e-26 121.7 82 74.4
Potri.003G197701 Populus trichocarpa HOM05D005545 ORTHO05D006917 2.8e-26 121.7 87 71.3
Potri.T125006 Populus trichocarpa HOM05D005545 ORTHO05D006917 2.8e-26 121.7 87 71.3
Peaxi162Scf00025g01520 Petunia axillaris HOM05D005545 ORTHO05D006917 4.7e-26 120.9 87 69.0
EL10Ac2g02815 Beta vulgaris HOM05D005545 ORTHO05D006917 6.2e-26 120.6 82 72.0
AUR62037185 Chenopodium quinoa HOM05D005545 ORTHO05D006917 6.2e-26 120.6 82 70.7
Migut.B01225 Erythranthe guttata HOM05D005545 ORTHO05D006917 6.2e-26 120.6 86 68.6
FvH4_7g02950 Fragaria vesca HOM05D005545 ORTHO05D006917 6.2e-26 120.6 85 68.2
Nitab4.5_0003414g0020 Nicotiana tabacum HOM05D005545 ORTHO05D006917 8.1e-26 120.2 87 71.3
Solyc11g005250.3 Solanum lycopersicum HOM05D005545 ORTHO05D006917 8.1e-26 120.2 85 70.6
Ah.12g062880 Amaranthus hybridus HOM05D005545 ORTHO05D006917 1.4e-25 119.4 82 70.7
Nitab4.5_0000320g0210 Nicotiana tabacum HOM05D005545 ORTHO05D006917 2.3e-25 118.6 87 70.1
FAN06G4324 Fragaria x ananassa HOM05D005545 ORTHO05D006917 3.1e-25 118.2 85 67.1
Sed0011144 Sechium edule HOM05D005545 ORTHO05D006917 3.1e-25 118.2 83 67.5
MELO3C012467.2 Cucumis melo HOM05D005545 ORTHO05D006917 5.2e-25 117.5 82 65.9
FAN01G2386 Fragaria x ananassa HOM05D005545 ORTHO05D006917 5.2e-25 117.5 83 67.5
FAN03G2070 Fragaria x ananassa HOM05D005545 ORTHO05D006917 6.8e-25 117.1 83 67.5
CsaV3_5G036710 Cucumis sativus L. HOM05D005545 ORTHO05D006917 8.9e-25 116.7 82 65.9
Zm00001eb140810 Zea mays HOM05D005545 ORTHO05D006917 8.9e-25 116.7 80 72.5
GSVIVG01013494001 Vitis vinifera HOM05D005545 ORTHO05D006917 1.2e-24 116.3 70 80.0
HanXRQChr11g0341811 Helianthus annuus HOM05D005545 ORTHO05D006917 2.0e-24 115.5 81 72.8
Ca_19084_v3 Cicer arietinum L. HOM05D005545 ORTHO05D006917 5.8e-24 114.0 80 71.2
PGR044G1070 Punica granatum HOM05D005545 ORTHO05D006917 5.8e-24 114.0 82 68.3
CAN.G1074.9 Capsicum annuum HOM05D005545 ORTHO05D006917 7.5e-24 113.6 87 69.0
Oeu040901.1 Olea europaea HOM05D005545 ORTHO05D006917 7.5e-24 113.6 109 55.0
ECA248G0597 Erigeron canadensis HOM05D005545 ORTHO05D006917 9.9e-24 113.2 82 72.0
Eucgr.J01185 Eucalyptus grandis HOM05D005545 ORTHO05D006917 9.9e-24 113.2 82 69.5
Hund15735 Selenicereus undatus HOM05D005545 ORTHO05D006917 1.7e-23 112.5 103 60.2
HPP92_001017 Vanilla planifolia HOM05D005545 ORTHO05D006917 1.7e-23 112.5 87 69.0
CDE12G0276 Ceratophyllum demersum HOM05D005545 ORTHO05D006917 3.7e-23 111.3 80 70.0
AUR62026877 Chenopodium quinoa HOM05D005545 ORTHO05D006917 1.4e-22 109.4 75 69.3
Lj3g0017403 Lotus japonicus HOM05D005545 ORTHO05D006917 1.4e-22 109.4 88 63.6
Psat5g217720 Pisum sativum HOM05D005545 ORTHO05D006917 1.9e-22 109.0 80 71.2
TPR.G17827 Trifolium pratense HOM05D005545 ORTHO05D006917 1.9e-22 109.0 80 71.2
arahy.Tifrunner.gnm1.ann1.HR7PRR Arachis hypogaea HOM05D005545 ORTHO05D006917 2.4e-22 108.6 84 66.7
arahy.Tifrunner.gnm1.ann1.598UNF Arachis hypogaea HOM05D005545 ORTHO05D006917 3.2e-22 108.2 84 66.7
Carub.0005s2108 Capsella rubella HOM05D005545 ORTHO05D006917 4.1e-22 107.8 85 65.9
Thhalv10010067m.g Eutrema salsugineum HOM05D005545 ORTHO05D006917 5.4e-22 107.5 82 67.1
Os01g0952200 Oryza sativa ssp. japonica HOM05D005545 ORTHO05D006917 5.4e-22 107.5 86 64.0
Phvul.005G027400 Phaseolus vulgaris HOM05D005545 ORTHO05D006917 5.4e-22 107.5 87 63.2
PSO384G2575 Papaver somniferum HOM05D005545 ORTHO05D006917 7.1e-22 107.1 82 69.5
Glyma.04G138300 Glycine max HOM05D005545 ORTHO05D006917 1.2e-21 106.3 84 66.7
THA.LOC104824192 Tarenaya hassleriana HOM05D005545 ORTHO05D006917 2.1e-21 105.5 83 67.5
Sp5g07960 Schrenkiella parvula HOM05D005545 ORTHO05D006917 2.7e-21 105.1 87 62.1
Lalb_Chr04g0264091 Lupinus albus HOM05D005545 ORTHO05D006917 4.6e-21 104.4 85 64.7
VMungo1080G1426 Vigna mungo HOM05D005545 ORTHO05D006917 4.6e-21 104.4 86 62.8
CARHR164360 Cardamine hirsuta HOM05D005545 ORTHO05D006917 3.0e-20 101.7 85 62.4
AT3G54460 Arabidopsis thaliana HOM05D005545 ORTHO05D006917 5.1e-20 100.9 85 60.0
Lsat_1_v5_gn_1_115460 Lactuca sativa HOM05D005545 ORTHO05D006917 6.6e-20 100.5 70 74.3
BcaB02g08489 Brassica carinata HOM05D005545 ORTHO05D006917 1.5e-19 99.4 83 63.9
AL5G35510 Arabidopsis lyrata HOM05D005545 ORTHO05D006917 2.5e-19 98.6 85 60.0
A04p05370 Brassica napus HOM05D005545 ORTHO05D006917 4.3e-19 97.8 83 63.9
BraA04t16237Z Brassica rapa HOM05D005545 ORTHO05D006917 4.3e-19 97.8 83 63.9
BolC4t25380H Brassica oleracea HOM05D005545 ORTHO05D006917 1.6e-18 95.9 84 64.3
BcaC02g09068 Brassica carinata HOM05D005545 ORTHO05D006917 2.1e-18 95.5 84 64.3
C04p38060 Brassica napus HOM05D005545 ORTHO05D006917 2.1e-18 95.5 84 64.3
AagrBONN_evm.TU.Sc2ySwM_117.768 Anthoceros agrestis HOM05D005545 ORTHO05D006917 5.2e-17 90.9 83 61.4
Aa31sc35G110 Aethionema arabicum HOM05D005545 ORTHO05D006917 6.8e-17 90.5 89 58.4
AagrBONN_evm.TU.Sc2ySwM_368.3444 Anthoceros agrestis HOM05D005545 ORTHO05D006917 4.4e-16 87.8 87 59.8
Actinidia06241 Actinidia chinensis HOM05D005545 ORTHO05D006917 1.6e-13 79.3 48 75.0
Pp3c16_14340 Physcomitrium patens HOM05D005545 ORTHO05D006917 4.6e-13 77.8 86 53.5
ATR0745G092 Amborella trichopoda HOM05D005545 ORTHO05D006917 5.1e-12 74.3 38 97.4
unitig_749.g13482 Utricularia gibba HOM05D005545 ORTHO05D006917 1.1e-11 73.2 38 94.7
SMO351G0460 Selaginella moellendorffii HOM05D005545 ORTHO05D006917 1.9e-11 72.4 81 54.3
Mapoly0059s0106 Marchantia polymorpha HOM05D005545 ORTHO05D006917 1.3e-07 59.7 34 82.4


User provided reference genes

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