Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc21.92 Carica papaya HOM05D005380 ORTHO05D006601 1.8e-37 158.7 75 100.0
GSVIVG01013627001 Vitis vinifera HOM05D005380 ORTHO05D006601 1.1e-34 149.4 72 93.1
Atru.chr10.626 Acer truncatum HOM05D005380 ORTHO05D006601 1.4e-34 149.1 72 94.4
Atru.chr10.630_Atru.chr10.631 Acer truncatum HOM05D005380 ORTHO05D006601 1.4e-34 149.1 72 94.4
FvH4_3g11790 Fragaria vesca HOM05D005380 ORTHO05D006601 1.8e-34 148.7 72 93.1
TWI09G1549 Tripterygium wilfordii HOM05D005380 ORTHO05D006601 3.1e-34 147.9 72 93.1
Manes.11G052180 Manihot esculenta HOM05D005380 ORTHO05D006601 5.3e-34 147.1 72 93.1
MD05G1259300 Malus domestica HOM05D005380 ORTHO05D006601 6.9e-34 146.7 72 91.7
Potri.001G081900 Populus trichocarpa HOM05D005380 ORTHO05D006601 6.9e-34 146.7 72 91.7
RcHm_v2.0_Chr5g0019211 Rosa chinensis HOM05D005380 ORTHO05D006601 6.9e-34 146.7 72 91.7
Ciclev10014143m.g Citrus clementina HOM05D005380 ORTHO05D006601 9.1e-34 146.4 72 90.3
MD10G1238900 Malus domestica HOM05D005380 ORTHO05D006601 9.1e-34 146.4 72 90.3
FAN16G1170 Fragaria x ananassa HOM05D005380 ORTHO05D006601 1.2e-33 146.0 72 91.7
FAN21G3255 Fragaria x ananassa HOM05D005380 ORTHO05D006601 1.2e-33 146.0 72 91.7
FAN25G3771 Fragaria x ananassa HOM05D005380 ORTHO05D006601 1.2e-33 146.0 72 91.7
Lj3g0005152 Lotus japonicus HOM05D005380 ORTHO05D006601 1.2e-33 146.0 72 90.3
Lalb_Chr07g0194321 Lupinus albus HOM05D005380 ORTHO05D006601 1.2e-33 146.0 72 91.7
TPR.G31565 Trifolium pratense HOM05D005380 ORTHO05D006601 1.5e-33 145.6 72 90.3
Potri.003G148700 Populus trichocarpa HOM05D005380 ORTHO05D006601 2.0e-33 145.2 72 90.3
Thecc.06G135400 Theobroma cacao HOM05D005380 ORTHO05D006601 2.0e-33 145.2 72 91.7
Prupe.4G105500 Prunus persica HOM05D005380 ORTHO05D006601 2.6e-33 144.8 72 90.3
QL11p017903 Quercus lobata HOM05D005380 ORTHO05D006601 2.6e-33 144.8 72 88.9
Sabra03G0108200 Salix brachista HOM05D005380 ORTHO05D006601 2.6e-33 144.8 72 88.9
Cfa000719 Carpinus fangiana HOM05D005380 ORTHO05D006601 3.4e-33 144.4 72 90.3
CiPaw.10G065000 Carya illinoinensis HOM05D005380 ORTHO05D006601 3.4e-33 144.4 72 90.3
Eucgr.E02010 Eucalyptus grandis HOM05D005380 ORTHO05D006601 3.4e-33 144.4 72 90.3
Glyma.03G103900 Glycine max HOM05D005380 ORTHO05D006601 3.4e-33 144.4 72 90.3
Glyma.07G119900 Glycine max HOM05D005380 ORTHO05D006601 3.4e-33 144.4 72 90.3
Manes.16G057200 Manihot esculenta HOM05D005380 ORTHO05D006601 3.4e-33 144.4 72 91.7
PGR083G1975 Punica granatum HOM05D005380 ORTHO05D006601 3.4e-33 144.4 72 90.3
Ca_23214_v3 Cicer arietinum L. HOM05D005380 ORTHO05D006601 4.5e-33 144.1 72 87.5
Rhsim13G0198600 Rhododendron simsii HOM05D005380 ORTHO05D006601 4.5e-33 144.1 72 90.3
CSS0002209 Camellia sinensis var. sinensis HOM05D005380 ORTHO05D006601 5.9e-33 143.7 72 88.9
COL.COLO4_30926 Corchorus olitorius HOM05D005380 ORTHO05D006601 5.9e-33 143.7 71 91.5
arahy.Tifrunner.gnm1.ann1.GT0B0E Arachis hypogaea HOM05D005380 ORTHO05D006601 7.7e-33 143.3 74 86.5
arahy.Tifrunner.gnm1.ann1.UEF6CF Arachis hypogaea HOM05D005380 ORTHO05D006601 7.7e-33 143.3 74 86.5
Phvul.010G053600 Phaseolus vulgaris HOM05D005380 ORTHO05D006601 7.7e-33 143.3 72 88.9
VMungo0331G1684 Vigna mungo HOM05D005380 ORTHO05D006601 7.7e-33 143.3 72 88.9
Medtr8g012560 Medicago truncatula HOM05D005380 ORTHO05D006601 1.0e-32 142.9 72 88.9
MBI10_g16336_MAGBIO Magnolia biondii HOM05D005380 ORTHO05D006601 1.3e-32 142.5 72 87.5
Dinv01434 Davidia involucrata HOM05D005380 ORTHO05D006601 1.7e-32 142.1 72 88.9
Hma1.2p1_1380F.1_g279310 Hydrangea macrophylla HOM05D005380 ORTHO05D006601 1.7e-32 142.1 72 88.9
THA.LOC104810347 Tarenaya hassleriana HOM05D005380 ORTHO05D006601 1.7e-32 142.1 72 88.9
TAR365G0677 Trochodendron aralioides HOM05D005380 ORTHO05D006601 1.7e-32 142.1 72 88.9
Lj1A1141T72 Lonicera japonica HOM05D005380 ORTHO05D006601 2.2e-32 141.7 72 88.9
Hund06739 Selenicereus undatus HOM05D005380 ORTHO05D006601 2.2e-32 141.7 72 88.9
ATR0743G092 Amborella trichopoda HOM05D005380 ORTHO05D006601 3.8e-32 141.0 72 86.1
Gohir.D10G048301 Gossypium hirsutum HOM05D005380 ORTHO05D006601 3.8e-32 141.0 72 87.5
CsaV3_1G046710 Cucumis sativus L. HOM05D005380 ORTHO05D006601 5.0e-32 140.6 72 83.3
Oeu000486.1 Olea europaea HOM05D005380 ORTHO05D006601 5.0e-32 140.6 72 84.7
EL10Ac8g19470 Beta vulgaris HOM05D005380 ORTHO05D006601 6.5e-32 140.2 72 86.1
Duzib235G1486 Durio zibethinus HOM05D005380 ORTHO05D006601 6.5e-32 140.2 72 87.5
QL05p013204 Quercus lobata HOM05D005380 ORTHO05D006601 6.5e-32 140.2 72 86.1
Thhalv10006692m.g Eutrema salsugineum HOM05D005380 ORTHO05D006601 8.5e-32 139.8 72 86.1
MELO3C021785.2 Cucumis melo HOM05D005380 ORTHO05D006601 1.1e-31 139.4 72 81.9
Gorai.011G051400 Gossypium raimondii HOM05D005380 ORTHO05D006601 1.1e-31 139.4 72 86.1
Sc10g0009350 Simmondsia chinensis HOM05D005380 ORTHO05D006601 1.4e-31 139.0 72 87.5
Lsat_1_v5_gn_4_38401 Lactuca sativa HOM05D005380 ORTHO05D006601 1.9e-31 138.7 72 84.7
Duzib192G0856 Durio zibethinus HOM05D005380 ORTHO05D006601 2.5e-31 138.3 72 88.9
Solyc05g015210.4 Solanum lycopersicum HOM05D005380 ORTHO05D006601 3.2e-31 137.9 72 84.7
Aqoxy5G03588 Aquilegia oxysepala HOM05D005380 ORTHO05D006601 4.2e-31 137.5 72 84.7
CSS0038991 Camellia sinensis var. sinensis HOM05D005380 ORTHO05D006601 4.2e-31 137.5 72 84.7
Aa31LG7G6850 Aethionema arabicum HOM05D005380 ORTHO05D006601 5.5e-31 137.1 72 84.7
BcaB07g32281 Brassica carinata HOM05D005380 ORTHO05D006601 5.5e-31 137.1 72 83.3
BcaC05g26192 Brassica carinata HOM05D005380 ORTHO05D006601 5.5e-31 137.1 72 83.3
A09p41900 Brassica napus HOM05D005380 ORTHO05D006601 5.5e-31 137.1 72 83.3
C05p21950 Brassica napus HOM05D005380 ORTHO05D006601 5.5e-31 137.1 72 83.3
ClCG01G008980 Citrullus lanatus HOM05D005380 ORTHO05D006601 5.5e-31 137.1 70 82.9
Nn1g01426 Nelumbo nucifera HOM05D005380 ORTHO05D006601 5.5e-31 137.1 72 84.7
SalBow8G2602 Salvia bowleyana HOM05D005380 ORTHO05D006601 5.5e-31 137.1 72 84.7
SalBow8G4959 Salvia bowleyana HOM05D005380 ORTHO05D006601 5.5e-31 137.1 72 84.7
Carub.0001s2236 Capsella rubella HOM05D005380 ORTHO05D006601 7.2e-31 136.7 72 83.3
CAN.G890.49 Capsicum annuum HOM05D005380 ORTHO05D006601 7.2e-31 136.7 72 86.1
AUR62042012 Chenopodium quinoa HOM05D005380 ORTHO05D006601 7.2e-31 136.7 72 80.6
AUR62043348 Chenopodium quinoa HOM05D005380 ORTHO05D006601 7.2e-31 136.7 72 80.6
Sopen05g010460 Solanum pennellii HOM05D005380 ORTHO05D006601 7.2e-31 136.7 72 84.7
Cc09_g06540 Coffea canephora HOM05D005380 ORTHO05D006601 9.4e-31 136.3 72 83.3
BolC5t30892H Brassica oleracea HOM05D003679 ORTHO05D004265 1.2e-30 136.0 72 81.9
CANSAT80G1059 Cannabis sativa HOM05D005380 ORTHO05D006601 1.2e-30 136.0 72 81.9
Migut.M01950 Erythranthe guttata HOM05D005380 ORTHO05D006601 1.2e-30 136.0 72 84.7
AL1G36400 Arabidopsis lyrata HOM05D005380 ORTHO05D006601 1.6e-30 135.6 72 81.9
AT1G22860 Arabidopsis thaliana HOM05D005380 ORTHO05D006601 1.6e-30 135.6 72 81.9
Ah.14g085840 Amaranthus hybridus HOM05D005380 ORTHO05D006601 2.7e-30 134.8 72 81.9
MSTRG.12176 Avicennia marina HOM05D005380 ORTHO05D006601 2.7e-30 134.8 72 83.3
BraA09t39678Z Brassica rapa HOM05D005380 ORTHO05D006601 2.7e-30 134.8 72 81.9
CDE02G1822 Ceratophyllum demersum HOM05D005380 ORTHO05D006601 2.7e-30 134.8 72 81.9
CARHR023210 Cardamine hirsuta HOM05D005380 ORTHO05D006601 4.7e-30 134.0 70 82.9
HanXRQChr14g0457361 Helianthus annuus HOM05D005380 ORTHO05D006601 4.7e-30 134.0 72 81.9
Sp1g20340 Schrenkiella parvula HOM05D005380 ORTHO05D006601 4.7e-30 134.0 72 81.9
Sed0014613 Sechium edule HOM05D005380 ORTHO05D006601 4.7e-30 134.0 72 79.2
PSO170G0871 Papaver somniferum HOM05D005380 ORTHO05D006601 6.1e-30 133.7 72 81.9
PSO357G0674 Papaver somniferum HOM05D005380 ORTHO05D006601 6.1e-30 133.7 72 81.9
Zm00001eb267510 Zea mays HOM05D005380 ORTHO05D006601 6.1e-30 133.7 72 81.9
HPP92_023728 Vanilla planifolia HOM05D005380 ORTHO05D006601 1.0e-29 132.9 74 77.0
ECA247G3537 Erigeron canadensis HOM05D005380 ORTHO05D006601 1.4e-29 132.5 72 80.6
Psat4g204440 Pisum sativum HOM05D005380 ORTHO05D006601 1.4e-29 132.5 86 74.4
SGA_v2.0_scaffold223G42899 Striga asiatica HOM05D005380 ORTHO05D006601 1.4e-29 132.5 72 79.2
CDE04G2683 Ceratophyllum demersum HOM05D005380 ORTHO05D006601 1.8e-29 132.1 72 80.6
DCAR_003768 Daucus carota HOM05D005380 ORTHO05D006601 2.3e-29 131.7 72 81.9
ECA234G0325 Erigeron canadensis HOM05D005380 ORTHO05D006601 6.7e-29 130.2 72 77.8
vmacro04057 Vaccinium macrocarpon HOM05D005380 ORTHO05D006601 2.0e-28 128.6 108 61.1
Os05g0104100 Oryza sativa ssp. japonica HOM05D005380 ORTHO05D006601 5.7e-28 127.1 72 76.4
Peaxi162Scf00128g01143 Petunia axillaris HOM05D005380 ORTHO05D006601 7.4e-28 126.7 80 76.2
Haze_06032 Corylus avellana HOM05D005380 ORTHO05D006601 9.7e-28 126.3 93 66.7
SEGI_33229 Sequoiadendron giganteum HOM05D005380 ORTHO05D006601 3.1e-26 121.3 73 72.6
Nitab4.5_0002174g0030 Nicotiana tabacum HOM05D005380 ORTHO05D006601 2.9e-24 114.8 77 71.4
Nitab4.5_0005179g0030 Nicotiana tabacum HOM05D005380 ORTHO05D006601 3.8e-24 114.4 77 71.4
CSS0007558 Camellia sinensis var. sinensis HOM05D005380 ORTHO05D006601 7.4e-20 100.1 72 62.5
Mapoly0029s0138 Marchantia polymorpha HOM05D005380 ORTHO05D006601 6.3e-19 97.1 73 56.2
Pp3c6_25240 Physcomitrium patens HOM05D005380 ORTHO05D006601 8.2e-19 96.7 70 58.6
SMO146G0159 Selaginella moellendorffii HOM05D005380 ORTHO05D006601 1.8e-18 95.5 70 58.6
AagrBONN_evm.TU.Sc2ySwM_362.853 Anthoceros agrestis HOM05D005380 ORTHO05D006601 3.1e-18 94.7 67 59.7
CBR_g10913 Chara braunii HOM05D005380 ORTHO05D006601 2.0e-12 75.5 67 50.7
QL10p043084 Quercus lobata HOM05D005380 ORTHO05D006601 1.1e-10 69.7 40 82.5
QL10p044954 Quercus lobata HOM05D004535 ORTHO05D005341 8.0e-06 53.5 31 80.6


User provided reference genes

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