Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc21.91 Carica papaya HOM05D005380 ORTHO05D006601 9.0e-72 273.5 138 100.0
Potri.001G081900 Populus trichocarpa HOM05D005380 ORTHO05D006601 1.1e-48 196.8 120 81.7
Sabra03G0108200 Salix brachista HOM05D005380 ORTHO05D006601 9.1e-48 193.7 120 78.3
COL.COLO4_30926 Corchorus olitorius HOM05D005380 ORTHO05D006601 1.0e-46 190.3 120 78.3
Thecc.06G135400 Theobroma cacao HOM05D005380 ORTHO05D006601 1.3e-46 189.9 120 78.3
Ciclev10014143m.g Citrus clementina HOM05D005380 ORTHO05D006601 1.7e-46 189.5 120 76.7
Manes.16G057200 Manihot esculenta HOM05D005380 ORTHO05D006601 2.2e-46 189.1 120 77.5
Potri.003G148700 Populus trichocarpa HOM05D005380 ORTHO05D006601 2.2e-46 189.1 120 76.7
Manes.11G052180 Manihot esculenta HOM05D005380 ORTHO05D006601 2.9e-46 188.7 120 77.5
Atru.chr10.626 Acer truncatum HOM05D005380 ORTHO05D006601 8.5e-46 187.2 120 75.8
Atru.chr10.630_Atru.chr10.631 Acer truncatum HOM05D005380 ORTHO05D006601 8.5e-46 187.2 120 75.8
Cfa000719 Carpinus fangiana HOM05D005380 ORTHO05D006601 1.9e-45 186.0 120 79.2
Haze_06032 Corylus avellana HOM05D005380 ORTHO05D006601 1.9e-45 186.0 120 79.2
TWI09G1549 Tripterygium wilfordii HOM05D005380 ORTHO05D006601 2.5e-45 185.7 120 74.2
CiPaw.10G065000 Carya illinoinensis HOM05D005380 ORTHO05D006601 4.2e-45 184.9 121 76.0
Dinv01434 Davidia involucrata HOM05D005380 ORTHO05D006601 7.2e-45 184.1 120 75.8
Duzib235G1486 Durio zibethinus HOM05D005380 ORTHO05D006601 2.7e-44 182.2 120 73.3
Duzib192G0856 Durio zibethinus HOM05D005380 ORTHO05D006601 3.6e-44 181.8 120 75.0
GSVIVG01013627001 Vitis vinifera HOM05D005380 ORTHO05D006601 3.6e-44 181.8 120 76.7
Gohir.D10G048301 Gossypium hirsutum HOM05D005380 ORTHO05D006601 2.3e-43 179.1 120 76.7
Gorai.011G051400 Gossypium raimondii HOM05D005380 ORTHO05D006601 2.3e-43 179.1 120 76.7
MBI10_g16336_MAGBIO Magnolia biondii HOM05D005380 ORTHO05D006601 2.3e-43 179.1 120 74.2
QL11p017903 Quercus lobata HOM05D005380 ORTHO05D006601 3.0e-43 178.7 120 75.0
RcHm_v2.0_Chr5g0019211 Rosa chinensis HOM05D005380 ORTHO05D006601 4.0e-43 178.3 124 71.8
TAR365G0677 Trochodendron aralioides HOM05D005380 ORTHO05D006601 6.8e-43 177.6 120 74.2
Prupe.4G105500 Prunus persica HOM05D005380 ORTHO05D006601 8.8e-43 177.2 121 71.9
MD05G1259300 Malus domestica HOM05D005380 ORTHO05D006601 1.2e-42 176.8 116 75.9
MD10G1238900 Malus domestica HOM05D005380 ORTHO05D006601 2.6e-42 175.6 120 72.5
QL05p013201 Quercus lobata HOM05D005380 ORTHO05D006601 1.3e-41 173.3 118 72.9
vmacro04057 Vaccinium macrocarpon HOM05D005380 ORTHO05D006601 1.3e-41 173.3 121 71.9
CANSAT80G1059 Cannabis sativa HOM05D005380 ORTHO05D006601 2.8e-41 172.2 141 61.0
Ca_23214_v3 Cicer arietinum L. HOM05D005380 ORTHO05D006601 2.8e-41 172.2 120 68.3
CSS0002209 Camellia sinensis var. sinensis HOM05D005380 ORTHO05D006601 3.7e-41 171.8 120 75.8
CSS0007558 Camellia sinensis var. sinensis HOM05D005380 ORTHO05D006601 3.7e-41 171.8 120 75.8
Nn1g01426 Nelumbo nucifera HOM05D005380 ORTHO05D006601 8.3e-41 170.6 120 69.2
Lj3g0005152 Lotus japonicus HOM05D005380 ORTHO05D006601 1.1e-40 170.2 117 70.9
FvH4_3g11790 Fragaria vesca HOM05D005380 ORTHO05D006601 4.1e-40 168.3 124 67.7
Phvul.010G053600 Phaseolus vulgaris HOM05D005380 ORTHO05D006601 4.1e-40 168.3 117 70.1
PSO170G0871 Papaver somniferum HOM05D005380 ORTHO05D006601 5.4e-40 167.9 120 70.0
VMungo0331G1684 Vigna mungo HOM05D005380 ORTHO05D006601 5.4e-40 167.9 117 70.1
PSO357G0674 Papaver somniferum HOM05D005380 ORTHO05D006601 9.1e-40 167.2 120 70.0
FAN25G3771 Fragaria x ananassa HOM05D005380 ORTHO05D006601 1.6e-39 166.4 124 66.9
Glyma.07G119900 Glycine max HOM05D005380 ORTHO05D006601 2.0e-39 166.0 117 68.4
FAN21G3255 Fragaria x ananassa HOM05D005380 ORTHO05D006601 2.7e-39 165.6 121 67.8
TPR.G31565 Trifolium pratense HOM05D005380 ORTHO05D006601 4.5e-39 164.9 117 68.4
Lalb_Chr07g0194321 Lupinus albus HOM05D005380 ORTHO05D006601 1.0e-38 163.7 117 67.5
Medtr8g012560 Medicago truncatula HOM05D005380 ORTHO05D006601 1.0e-38 163.7 117 68.4
Eucgr.E02010 Eucalyptus grandis HOM05D005380 ORTHO05D006601 1.7e-38 162.9 120 66.7
FAN16G1170 Fragaria x ananassa HOM05D005380 ORTHO05D006601 1.7e-38 162.9 124 66.1
ECA234G0325 Erigeron canadensis HOM05D005380 ORTHO05D006601 2.2e-38 162.5 117 69.2
ECA247G3537 Erigeron canadensis HOM05D005380 ORTHO05D006601 2.2e-38 162.5 117 70.1
arahy.Tifrunner.gnm1.ann1.UEF6CF Arachis hypogaea HOM05D005380 ORTHO05D006601 2.9e-38 162.2 117 65.8
Glyma.03G103900 Glycine max HOM05D005380 ORTHO05D006601 2.9e-38 162.2 117 67.5
Lsat_1_v5_gn_4_38401 Lactuca sativa HOM05D005380 ORTHO05D006601 8.5e-38 160.6 117 69.2
Actinidia12893 Actinidia chinensis HOM05D005380 ORTHO05D006601 2.5e-37 159.1 118 70.3
HanXRQChr14g0457361 Helianthus annuus HOM05D005380 ORTHO05D006601 2.5e-37 159.1 117 68.4
PGR083G1975 Punica granatum HOM05D005380 ORTHO05D006601 2.5e-37 159.1 123 67.5
arahy.Tifrunner.gnm1.ann1.GT0B0E Arachis hypogaea HOM05D005380 ORTHO05D006601 5.5e-37 157.9 120 64.2
Os05g0104100 Oryza sativa ssp. japonica HOM05D005380 ORTHO05D006601 1.2e-36 156.8 122 66.4
Psat4g204440 Pisum sativum HOM05D005380 ORTHO05D006601 1.2e-36 156.8 117 65.8
Hma1.2p1_1380F.1_g279310 Hydrangea macrophylla HOM05D005380 ORTHO05D006601 1.6e-36 156.4 120 66.7
CsaV3_1G046710 Cucumis sativus L. HOM05D005380 ORTHO05D006601 2.1e-36 156.0 120 65.0
MELO3C021785.2 Cucumis melo HOM05D005380 ORTHO05D006601 3.6e-36 155.2 120 65.0
THA.LOC104810347 Tarenaya hassleriana HOM05D005380 ORTHO05D006601 4.7e-36 154.8 120 61.7
DCAR_003768 Daucus carota HOM05D005380 ORTHO05D006601 8.0e-36 154.1 120 65.8
Rhsim13G0198600 Rhododendron simsii HOM05D005380 ORTHO05D006601 1.8e-35 152.9 119 65.5
Zm00001eb267510 Zea mays HOM05D005380 ORTHO05D006601 2.3e-35 152.5 120 66.7
Aqoxy5G03588 Aquilegia oxysepala HOM05D005380 ORTHO05D006601 3.0e-35 152.1 120 63.3
AT1G22860 Arabidopsis thaliana HOM05D005380 ORTHO05D006601 5.2e-35 151.4 123 58.5
ClCG01G008980 Citrullus lanatus HOM05D005380 ORTHO05D006601 5.2e-35 151.4 126 60.3
Thhalv10006692m.g Eutrema salsugineum HOM05D005380 ORTHO05D006601 5.2e-35 151.4 123 57.7
ATR0743G092 Amborella trichopoda HOM05D005380 ORTHO05D006601 1.2e-34 150.2 120 65.0
Sp1g20340 Schrenkiella parvula HOM05D005380 ORTHO05D006601 2.0e-34 149.4 123 56.9
AL1G36400 Arabidopsis lyrata HOM05D005380 ORTHO05D006601 2.6e-34 149.1 123 56.9
Aa31LG7G6850 Aethionema arabicum HOM05D005380 ORTHO05D006601 4.4e-34 148.3 123 56.9
Sc10g0009350 Simmondsia chinensis HOM05D005380 ORTHO05D006601 5.7e-34 147.9 120 60.8
Carub.0001s2236 Capsella rubella HOM05D005380 ORTHO05D006601 9.8e-34 147.1 123 56.1
Ah.14g085840 Amaranthus hybridus HOM05D005380 ORTHO05D006601 1.3e-33 146.7 125 60.0
Nitab4.5_0002174g0030 Nicotiana tabacum HOM05D005380 ORTHO05D006601 1.3e-33 146.7 120 62.5
BcaB07g32281 Brassica carinata HOM05D005380 ORTHO05D006601 1.7e-33 146.4 123 56.1
BcaC05g26192 Brassica carinata HOM05D005380 ORTHO05D006601 1.7e-33 146.4 123 56.1
A09p41900 Brassica napus HOM05D005380 ORTHO05D006601 1.7e-33 146.4 123 56.1
C05p21950 Brassica napus HOM05D005380 ORTHO05D006601 1.7e-33 146.4 123 56.1
BolC5t30892H Brassica oleracea HOM05D003679 ORTHO05D004265 1.7e-33 146.4 123 56.1
Oeu000486.1 Olea europaea HOM05D005380 ORTHO05D006601 3.7e-33 145.2 132 59.1
Solyc05g015210.4 Solanum lycopersicum HOM05D005380 ORTHO05D006601 3.7e-33 145.2 120 62.5
Sopen05g010460 Solanum pennellii HOM05D005380 ORTHO05D006601 3.7e-33 145.2 120 61.7
BraA09t39678Z Brassica rapa HOM05D005380 ORTHO05D006601 4.9e-33 144.8 123 55.3
CARHR023210 Cardamine hirsuta HOM05D005380 ORTHO05D006601 4.9e-33 144.8 123 55.3
Nitab4.5_0005179g0030 Nicotiana tabacum HOM05D005380 ORTHO05D006601 4.9e-33 144.8 120 62.5
HPP92_023728 Vanilla planifolia HOM05D005380 ORTHO05D006601 1.1e-32 143.7 120 61.7
CAN.G890.49 Capsicum annuum HOM05D005380 ORTHO05D006601 3.1e-32 142.1 120 60.0
Hund06739 Selenicereus undatus HOM05D005380 ORTHO05D006601 4.1e-32 141.7 120 60.0
Sed0014613 Sechium edule HOM05D005380 ORTHO05D006601 7.0e-32 141.0 121 60.3
AUR62042012 Chenopodium quinoa HOM05D005380 ORTHO05D006601 3.5e-31 138.7 120 56.7
Migut.M01950 Erythranthe guttata HOM05D005380 ORTHO05D006601 4.5e-31 138.3 121 62.0
Peaxi162Scf00128g01143 Petunia axillaris HOM05D005380 ORTHO05D006601 4.5e-31 138.3 120 61.7
EL10Ac8g19470 Beta vulgaris HOM05D005380 ORTHO05D006601 7.7e-31 137.5 120 58.3
Cc09_g06540 Coffea canephora HOM05D005380 ORTHO05D006601 1.3e-30 136.7 120 60.8
AUR62043348 Chenopodium quinoa HOM05D005380 ORTHO05D006601 2.3e-30 136.0 120 56.7
Lj1A1141T73 Lonicera japonica HOM05D005380 ORTHO05D006601 3.3e-29 132.1 91 72.5
unitig_747.g21990 Utricularia gibba HOM05D005380 ORTHO05D006601 1.0e-27 127.1 120 57.5
MSTRG.12176 Avicennia marina HOM05D005380 ORTHO05D006601 2.6e-26 122.5 121 55.4
CDE02G1822 Ceratophyllum demersum HOM05D005380 ORTHO05D006601 3.4e-26 122.1 121 52.1
SGA_v2.0_scaffold223G42899 Striga asiatica HOM05D005380 ORTHO05D006601 1.3e-25 120.2 112 56.2
SalBow8G2602 Salvia bowleyana HOM05D005380 ORTHO05D006601 2.2e-25 119.4 98 62.2
SalBow8G4959 Salvia bowleyana HOM05D005380 ORTHO05D006601 2.2e-25 119.4 98 62.2
SEGI_33229 Sequoiadendron giganteum HOM05D005380 ORTHO05D006601 1.6e-20 103.2 121 47.9
CDE04G2683 Ceratophyllum demersum HOM05D005380 ORTHO05D006601 2.9e-17 92.4 101 47.5
BcaNung06594 Brassica carinata HOM05D005380 ORTHO05D006601 1.1e-16 90.5 120 42.5
CSS0038991 Camellia sinensis var. sinensis HOM05D005380 ORTHO05D006601 1.9e-16 89.7 53 81.1
Pp3c6_25240 Physcomitrium patens HOM05D005380 ORTHO05D006601 8.6e-14 80.9 121 40.5
Mapoly0029s0138 Marchantia polymorpha HOM05D005380 ORTHO05D006601 5.6e-13 78.2 121 41.3
AagrBONN_evm.TU.Sc2ySwM_362.853 Anthoceros agrestis HOM05D005380 ORTHO05D006601 8.9e-11 70.9 131 37.4
CBR_g10913 Chara braunii HOM05D005380 ORTHO05D006601 1.0e-06 57.4 134 31.3


User provided reference genes

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