Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc19.179 Carica papaya HOM05D005334 ORTHO05D006560 6.2e-177 624.0 313 100.0
Cfa006855 Carpinus fangiana HOM05D005334 ORTHO05D006560 2.5e-138 495.7 364 70.9
vmacro09003 Vaccinium macrocarpon HOM05D005334 ORTHO05D006560 5.3e-136 488.0 364 70.6
Thecc.10G018300 Theobroma cacao HOM05D005334 ORTHO05D006560 9.0e-136 487.3 364 70.9
Haze_03908 Corylus avellana HOM05D005334 ORTHO05D006560 1.3e-134 483.4 357 70.3
CANSAT01G0836 Cannabis sativa HOM05D005334 ORTHO05D006560 2.2e-134 482.6 364 69.5
Potri.010G189500 Populus trichocarpa HOM05D005334 ORTHO05D006560 8.5e-134 480.7 364 68.7
Gorai.008G084700 Gossypium raimondii HOM05D005334 ORTHO05D006560 1.1e-133 480.3 363 71.3
QL06p036434 Quercus lobata HOM05D005334 ORTHO05D006560 5.5e-133 478.0 363 68.6
Duzib128G0185 Durio zibethinus HOM05D005334 ORTHO05D006560 1.2e-132 476.9 370 69.5
Gohir.D12G076300 Gossypium hirsutum HOM05D005334 ORTHO05D006560 1.6e-132 476.5 364 70.6
Hma1.2p1_0964F.1_g242010 Hydrangea macrophylla HOM05D005334 ORTHO05D006560 3.6e-132 475.3 380 66.8
Rhsim04G0113300 Rhododendron simsii HOM05D005334 ORTHO05D006560 3.6e-132 475.3 364 69.5
Ciclev10008278m.g Citrus clementina HOM05D005334 ORTHO05D006560 1.0e-131 473.8 364 67.9
TWI34G1275 Tripterygium wilfordii HOM05D005334 ORTHO05D006560 8.8e-131 470.7 365 68.8
GSVIVG01003946001 Vitis vinifera HOM05D005334 ORTHO05D006560 8.8e-131 470.7 362 68.8
FAN26G1496 Fragaria x ananassa HOM05D005334 ORTHO05D006560 1.5e-130 469.9 364 69.0
RcHm_v2.0_Chr6g0270401 Rosa chinensis HOM05D005334 ORTHO05D006560 4.3e-130 468.4 364 69.0
Manes.10G013400 Manihot esculenta HOM05D005334 ORTHO05D006560 5.7e-130 468.0 364 68.1
RcHm_v2.0_Chr6g0270301 Rosa chinensis HOM05D005334 ORTHO05D006560 2.2e-129 466.1 364 68.7
FvH4_7g07230 Fragaria vesca HOM05D005334 ORTHO05D006560 2.8e-129 465.7 364 68.4
Eucgr.A00094 Eucalyptus grandis HOM05D005334 ORTHO05D006560 4.8e-129 464.9 364 67.0
ClCG01G018260 Citrullus lanatus HOM05D005334 ORTHO05D006560 6.3e-129 464.5 364 66.2
Actinidia05483 Actinidia chinensis HOM05D005334 ORTHO05D006560 8.2e-129 464.2 364 65.7
Lj2C525G9 Lonicera japonica HOM05D005334 ORTHO05D006560 1.4e-128 463.4 330 73.9
FAN23G0357 Fragaria x ananassa HOM05D005334 ORTHO05D006560 2.4e-128 462.6 364 68.4
FAN23G0783 Fragaria x ananassa HOM05D005334 ORTHO05D006560 2.4e-128 462.6 364 68.4
Prupe.1G076500 Prunus persica HOM05D005334 ORTHO05D006560 3.1e-128 462.2 364 67.3
Ciclev10008715m.g Citrus clementina HOM05D005334 ORTHO05D006560 9.1e-128 460.7 367 66.5
Lj3g0001207 Lotus japonicus HOM05D005334 ORTHO05D006560 1.2e-127 460.3 364 67.9
MD01G1042400 Malus domestica HOM05D005334 ORTHO05D006560 1.2e-127 460.3 364 67.3
FvH4_1g19290 Fragaria vesca HOM05D005334 ORTHO05D006560 1.5e-127 459.9 364 68.1
Sopen11g005690 Solanum pennellii HOM05D005334 ORTHO05D006560 2.0e-127 459.5 364 66.2
CiPaw.07G045200 Carya illinoinensis HOM05D005334 ORTHO05D006560 2.6e-127 459.1 365 67.1
CAN.G1813.2 Capsicum annuum HOM05D005334 ORTHO05D006560 3.4e-127 458.8 364 65.9
SGA_v2.0_scaffold45G17221 Striga asiatica HOM05D005334 ORTHO05D006560 3.4e-127 458.8 364 66.8
Sabra10G0146100 Salix brachista HOM05D005334 ORTHO05D006560 4.5e-127 458.4 385 64.2
Nitab4.5_0000402g0140 Nicotiana tabacum HOM05D005334 ORTHO05D006560 1.3e-126 456.8 364 65.9
FAN19G2596 Fragaria x ananassa HOM05D005334 ORTHO05D006560 2.2e-126 456.1 327 74.3
CsaV3_6G044840 Cucumis sativus L. HOM05D005334 ORTHO05D006560 2.9e-126 455.7 364 65.1
Peaxi162Scf00085g00115 Petunia axillaris HOM05D005334 ORTHO05D006560 5.0e-126 454.9 364 65.7
Solyc11g010950.2 Solanum lycopersicum HOM05D005334 ORTHO05D006560 1.4e-125 453.4 364 65.4
Sed0026061 Sechium edule HOM05D005334 ORTHO05D006560 1.9e-125 453.0 367 65.7
MELO3C007703.2 Cucumis melo HOM05D005334 ORTHO05D006560 5.5e-125 451.4 368 64.4
Medtr8g007340 Medicago truncatula HOM05D005334 ORTHO05D006560 1.2e-124 450.3 364 65.9
PGSC0003DMG400016186 Solanum tuberosum HOM05D005334 ORTHO05D006560 2.7e-124 449.1 364 65.1
PSO832G1169 Papaver somniferum HOM05D005334 ORTHO05D006560 3.6e-124 448.7 364 66.8
PSO700G0130 Papaver somniferum HOM05D005334 ORTHO05D006560 4.7e-124 448.4 365 66.0
Migut.K00814 Erythranthe guttata HOM05D005334 ORTHO05D006560 1.4e-123 446.8 357 68.1
Nn5g29815 Nelumbo nucifera HOM05D005334 ORTHO05D006560 1.8e-123 446.4 364 65.4
Glyma.13G008300 Glycine max HOM05D005334 ORTHO05D006560 2.3e-123 446.0 364 66.2
CiPaw.07G045000 Carya illinoinensis HOM05D005334 ORTHO05D006560 5.1e-123 444.9 366 66.1
CSS0002721 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 6.7e-123 444.5 337 68.0
Psat4g223080 Pisum sativum HOM05D005334 ORTHO05D006560 8.8e-123 444.1 365 65.5
Phvul.010G045900 Phaseolus vulgaris HOM05D005334 ORTHO05D006560 1.1e-122 443.7 364 65.9
Phvul.010G046100 Phaseolus vulgaris HOM05D005334 ORTHO05D006560 5.7e-122 441.4 364 65.7
Ca_14799_v3 Cicer arietinum L. HOM05D005334 ORTHO05D006560 9.7e-122 440.7 365 65.5
PSO761G0425 Papaver somniferum HOM05D005334 ORTHO05D006560 1.3e-121 440.3 366 65.6
Sc03g0000510 Simmondsia chinensis HOM05D005334 ORTHO05D006560 1.3e-121 440.3 364 64.6
Cc07_g13790 Coffea canephora HOM05D005334 ORTHO05D006560 8.2e-121 437.6 365 64.1
arahy.Tifrunner.gnm1.ann1.DY9T0P Arachis hypogaea HOM05D005334 ORTHO05D006560 2.4e-120 436.0 364 64.6
TAR625G0036 Trochodendron aralioides HOM05D005334 ORTHO05D006560 3.1e-120 435.6 363 64.7
MSTRG.3723 Avicennia marina HOM05D005334 ORTHO05D006560 1.2e-119 433.7 365 63.3
arahy.Tifrunner.gnm1.ann1.D5QNLH Arachis hypogaea HOM05D005334 ORTHO05D006560 1.5e-119 433.3 364 64.3
Thhalv10021017m.g Eutrema salsugineum HOM05D005334 ORTHO05D006560 4.5e-119 431.8 364 65.7
VMungo0331G1245 Vigna mungo HOM05D005334 ORTHO05D006560 4.5e-119 431.8 364 63.7
CARHR085780 Cardamine hirsuta HOM05D005334 ORTHO05D006560 5.0e-118 428.3 364 64.8
SalBow5G4670 Salvia bowleyana HOM05D005334 ORTHO05D006560 5.0e-118 428.3 360 63.1
SalBow5G3116 Salvia bowleyana HOM05D005334 ORTHO05D006560 8.5e-118 427.6 360 63.1
ECA233G4415 Erigeron canadensis HOM05D005334 ORTHO05D006560 3.2e-117 425.6 363 62.8
Sp3g09500 Schrenkiella parvula HOM05D005334 ORTHO05D006560 2.1e-116 422.9 364 64.0
AUR62003692 Chenopodium quinoa HOM05D005334 ORTHO05D006560 2.7e-116 422.5 365 61.4
A05p38080 Brassica napus HOM05D005334 ORTHO05D006560 4.7e-116 421.8 366 63.7
BcaC05g29390 Brassica carinata HOM05D005334 ORTHO05D006560 6.1e-116 421.4 365 63.8
C05p56870 Brassica napus HOM05D005334 ORTHO05D006560 8.0e-116 421.0 366 63.7
Carub.0003s1053 Capsella rubella HOM05D005334 ORTHO05D006560 8.0e-116 421.0 367 64.9
PGR031G2068 Punica granatum HOM05D005334 ORTHO05D006560 8.0e-116 421.0 369 62.6
Aqoxy6G01573 Aquilegia oxysepala HOM05D005334 ORTHO05D006560 3.9e-115 418.7 356 63.5
BraA05t22600Z Brassica rapa HOM05D005334 ORTHO05D006560 5.2e-115 418.3 366 63.1
COL.COLO4_25710 Corchorus olitorius HOM05D005334 ORTHO05D006560 8.8e-115 417.5 307 71.3
AT3G11220 Arabidopsis thaliana HOM05D005334 ORTHO05D006560 1.5e-114 416.8 365 64.7
AUR62018003 Chenopodium quinoa HOM05D005334 ORTHO05D006560 2.0e-114 416.4 390 58.2
HanXRQChr08g0226671 Helianthus annuus HOM05D005334 ORTHO05D006560 2.0e-114 416.4 364 61.3
Aa31LG3G4530 Aethionema arabicum HOM05D005334 ORTHO05D006560 5.7e-114 414.8 364 64.0
Lalb_Chr12g0210501 Lupinus albus HOM05D005334 ORTHO05D006560 2.8e-113 412.5 364 61.8
BolC5t34351H Brassica oleracea HOM05D005334 ORTHO05D006560 3.7e-113 412.1 391 59.6
AL3G22740 Arabidopsis lyrata HOM05D005334 ORTHO05D006560 6.3e-113 411.4 372 62.9
THA.LOC104816551 Tarenaya hassleriana HOM05D005334 ORTHO05D006560 6.3e-113 411.4 364 62.9
CiPaw.07G049700 Carya illinoinensis HOM05D005334 ORTHO05D006560 2.2e-110 402.9 365 60.8
Lsat_1_v5_gn_6_15620 Lactuca sativa HOM05D005334 ORTHO05D006560 4.7e-108 395.2 320 67.2
PSO013G0112 Papaver somniferum HOM05D005334 ORTHO05D006560 5.7e-106 388.3 320 65.9
Hund14075 Selenicereus undatus HOM05D005334 ORTHO05D006560 1.8e-104 383.3 313 63.9
CiPaw.07G044700 Carya illinoinensis HOM05D005334 ORTHO05D006560 3.5e-103 379.0 367 58.0
unitig_0.g2648 Utricularia gibba HOM05D005334 ORTHO05D006560 3.8e-102 375.6 378 55.0
Os06g0639600 Oryza sativa ssp. japonica HOM05D005334 ORTHO05D006560 5.2e-99 365.2 367 55.0
Atru.chr12.1050 Acer truncatum HOM05D005334 ORTHO05D006560 1.2e-98 364.0 333 60.7
SHI03443 Sapria himalayana HOM05D005334 ORTHO05D006560 1.5e-98 363.6 354 55.6
CDE04G2384 Ceratophyllum demersum HOM05D005334 ORTHO05D006560 2.0e-98 363.2 366 57.7
FAN03G2380 Fragaria x ananassa HOM05D005334 ORTHO05D006560 2.2e-97 359.8 378 55.8
Ah.02g123390 Amaranthus hybridus HOM05D005334 ORTHO05D006560 3.8e-94 349.0 361 52.9
Glyma.03G108600 Glycine max HOM05D005334 ORTHO05D006560 2.1e-92 343.2 302 62.6
Zm00001eb387250 Zea mays HOM05D005334 ORTHO05D006560 4.7e-92 342.0 367 52.9
Dinv36960 Davidia involucrata HOM05D005334 ORTHO05D006560 2.8e-89 332.8 277 63.9
Prupe.6G206700 Prunus persica HOM05D005334 ORTHO05D006560 1.1e-80 304.3 313 57.5
SEGI_17743 Sequoiadendron giganteum HOM05D005334 ORTHO05D006560 1.4e-80 303.9 385 44.9
MBI10_g34777_MAGBIO Magnolia biondii HOM05D005334 ORTHO05D006560 3.2e-80 302.8 341 50.7
DCAR_003438 Daucus carota HOM05D005334 ORTHO05D006560 1.3e-78 297.4 257 61.9
Gohir.A12G078265 Gossypium hirsutum HOM05D005334 ORTHO05D006560 1.7e-73 280.4 245 64.9
ATR1153G009 Amborella trichopoda HOM05D005334 ORTHO05D006560 8.6e-70 268.1 308 49.7
Pp3c9_23940 Physcomitrium patens HOM05D005334 ORTHO05D006560 2.0e-66 256.9 370 41.9
Mapoly0006s0234 Marchantia polymorpha HOM05D005334 ORTHO05D006560 4.4e-66 255.8 387 40.6
TPR.G11130 Trifolium pratense HOM05D005334 ORTHO05D006560 7.8e-63 245.0 173 71.1
Lj6g0009802 Lotus japonicus HOM05D005334 ORTHO05D006560 2.5e-61 240.0 173 69.9
AagrBONN_evm.TU.Sc2ySwM_117.1770 Anthoceros agrestis HOM05D005334 ORTHO05D006560 2.4e-59 233.4 414 37.9
Lsat_1_v5_gn_8_12861 Lactuca sativa HOM05D005334 ORTHO05D006560 4.0e-59 232.6 161 71.4
Thecc.09G278800 Theobroma cacao HOM05D005334 ORTHO05D006560 2.6e-58 229.9 277 49.1
TPR.G5292 Trifolium pratense HOM05D005334 ORTHO05D006560 4.9e-57 225.7 140 82.1
Lsat_1_v5_gn_4_105120 Lactuca sativa HOM05D005334 ORTHO05D006560 1.4e-56 224.2 173 64.2
Lj2g0000099 Lotus japonicus HOM05D005334 ORTHO05D006560 1.9e-56 223.8 140 82.1
Dinv27014 Davidia involucrata HOM05D005334 ORTHO05D006560 4.6e-55 219.2 215 56.3
BcaB06g25638 Brassica carinata HOM05D005334 ORTHO05D006560 2.8e-52 209.9 141 80.1
CiPaw.07G044400 Carya illinoinensis HOM05D005334 ORTHO05D006560 6.2e-52 208.8 145 73.1
CSS0046374 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 4.6e-47 192.6 122 79.5
CSS0016906 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 1.1e-45 188.0 122 77.9
Lsat_1_v5_gn_4_67481 Lactuca sativa HOM05D005334 ORTHO05D006560 6.2e-44 182.2 140 66.4
Lsat_1_v5_gn_5_29040 Lactuca sativa HOM05D005334 ORTHO05D006560 5.3e-43 179.1 173 54.9
RcHm_v2.0_Chr2g0110581 Rosa chinensis HOM05D005334 ORTHO05D006560 3.0e-38 163.3 258 44.6
CSS0017464 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 1.8e-35 154.1 122 67.2
Lsat_1_v5_gn_1_79261 Lactuca sativa HOM05D005334 ORTHO05D006560 2.0e-34 150.6 140 57.9
ATR0022G031 Amborella trichopoda HOM05D005334 ORTHO05D006560 7.6e-34 148.7 141 59.6
SMO146G0066 Selaginella moellendorffii HOM05D005334 ORTHO05D006560 1.0e-33 148.3 241 39.4
HPP92_008022 Vanilla planifolia HOM05D005334 ORTHO05D006560 3.9e-30 136.3 115 58.3
MD01G1042700 Malus domestica HOM05D005334 ORTHO05D006560 4.8e-28 129.4 142 53.5
SEGI_40300 Sequoiadendron giganteum HOM05D005334 ORTHO05D006560 8.2e-28 128.6 169 43.8
CSS0026696 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 1.2e-23 114.8 72 76.4
HPP92_008021 Vanilla planifolia HOM05D005334 ORTHO05D006560 3.5e-23 113.2 79 75.9
MBI03_g45376_MAGBIO Magnolia biondii HOM05D005334 ORTHO05D006560 6.1e-23 112.5 82 69.5
MBI03_g46739_MAGBIO Magnolia biondii HOM05D005334 ORTHO05D006560 2.6e-18 97.1 77 62.3
Cre03.g196000 Chlamydomonas reinhardtii HOM05D005334 ORTHO05D006560 1.4e-16 91.3 416 22.8
CBR_g30786 Chara braunii HOM05D000019 ORTHO05D000002 4.8e-12 76.3 86 43.0
MCO12G220 Micromonas commoda HOM05D005334 ORTHO05D006560 2.2e-09 67.4 143 35.0


User provided reference genes

Program Settings