Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc169.31 Carica papaya HOM05D001849 ORTHO05D004689 6.3e-48 193.7 95 100.0
Potri.001G165900 Populus trichocarpa HOM05D001849 ORTHO05D004689 2.0e-38 162.2 84 91.7
Duzib192G0006 Durio zibethinus HOM05D001849 ORTHO05D004689 7.7e-38 160.2 84 89.3
Duzib235G0671 Durio zibethinus HOM05D001849 ORTHO05D004689 1.3e-37 159.5 84 89.3
Manes.11G016400 Manihot esculenta HOM05D001849 ORTHO05D004689 1.3e-37 159.5 84 90.5
Gohir.A09G079900 Gossypium hirsutum HOM05D001849 ORTHO05D004689 2.5e-36 155.2 84 88.1
Thecc.06G124800 Theobroma cacao HOM05D001849 ORTHO05D004689 1.6e-35 152.5 84 85.7
CiPaw.01G216000 Carya illinoinensis HOM05D001849 ORTHO05D004689 4.7e-35 151.0 83 85.5
COL.COLO4_30797 Corchorus olitorius HOM05D001849 ORTHO05D004689 1.8e-34 149.1 85 83.5
A05p35330 Brassica napus HOM05D001849 ORTHO05D004689 1.1e-33 146.4 90 80.0
BolC5t34029H Brassica oleracea HOM05D001849 ORTHO05D004689 1.1e-33 146.4 90 80.0
BraA05t22343Z Brassica rapa HOM05D001849 ORTHO05D004689 1.1e-33 146.4 90 80.0
SGA_v2.0_scaffold4G02078 Striga asiatica HOM05D001849 ORTHO05D004689 1.1e-33 146.4 84 79.8
THA.LOC104822664 Tarenaya hassleriana HOM05D001849 ORTHO05D004689 1.1e-33 146.4 84 83.3
TWI59G1440 Tripterygium wilfordii HOM05D001849 ORTHO05D004689 1.1e-33 146.4 82 84.1
BcaC05g29121 Brassica carinata HOM05D001849 ORTHO05D004689 1.5e-33 146.0 90 80.0
C05p53520 Brassica napus HOM05D001849 ORTHO05D004689 1.5e-33 146.0 90 80.0
C01p50480 Brassica napus HOM05D001849 ORTHO05D004689 2.0e-33 145.6 90 78.9
BolC1t05000H Brassica oleracea HOM05D001849 ORTHO05D004689 2.0e-33 145.6 90 78.9
Sp3g12380 Schrenkiella parvula HOM05D001849 ORTHO05D004689 2.6e-33 145.2 90 78.9
HanXRQChr09g0277131 Helianthus annuus HOM05D001849 ORTHO05D004689 3.3e-33 144.8 84 78.6
Carub.0003s1373 Capsella rubella HOM05D001849 ORTHO05D004689 5.7e-33 144.1 90 77.8
A01p39550 Brassica napus HOM05D001849 ORTHO05D004689 9.7e-33 143.3 90 77.8
Thhalv10019957m.g Eutrema salsugineum HOM05D001849 ORTHO05D004689 9.7e-33 143.3 90 78.9
PGR119G1999 Punica granatum HOM05D001849 ORTHO05D004689 1.3e-32 142.9 84 81.0
Solyc12g049410.3 Solanum lycopersicum HOM05D001849 ORTHO05D004689 1.7e-32 142.5 84 79.8
Sopen12g023890 Solanum pennellii HOM05D001849 ORTHO05D004689 1.7e-32 142.5 84 79.8
CANSAT56G0878 Cannabis sativa HOM05D001849 ORTHO05D004689 2.8e-32 141.7 84 78.6
FvH4_6g35170 Fragaria vesca HOM05D001849 ORTHO05D004689 2.8e-32 141.7 84 81.0
FAN02G0489 Fragaria x ananassa HOM05D001849 ORTHO05D004689 2.8e-32 141.7 84 81.0
FAN05G2930 Fragaria x ananassa HOM05D001849 ORTHO05D004689 2.8e-32 141.7 84 81.0
FAN09G4066 Fragaria x ananassa HOM05D001849 ORTHO05D004689 2.8e-32 141.7 84 81.0
FAN14G1459 Fragaria x ananassa HOM05D001849 ORTHO05D004689 2.8e-32 141.7 84 81.0
Lsat_1_v5_gn_4_91381 Lactuca sativa HOM05D001849 ORTHO05D004689 3.7e-32 141.4 84 78.6
RcHm_v2.0_Chr2g0146431 Rosa chinensis HOM05D001849 ORTHO05D004689 3.7e-32 141.4 84 82.1
EL10Ac7g16444 Beta vulgaris HOM05D001849 ORTHO05D004689 4.8e-32 141.0 84 78.6
AT3G14120 Arabidopsis thaliana HOM05D001849 ORTHO05D004689 6.3e-32 140.6 90 76.7
AL3G26350 Arabidopsis lyrata HOM05D001849 ORTHO05D004689 1.8e-31 139.0 90 75.6
FAN05G4033 Fragaria x ananassa HOM05D001849 ORTHO05D004689 1.8e-31 139.0 84 78.6
ECA232G2821 Erigeron canadensis HOM05D001849 ORTHO05D004689 2.4e-31 138.7 84 77.4
Sabra01G0127400 Salix brachista HOM05D001849 ORTHO05D004689 2.4e-31 138.7 96 71.9
vmacro15054 Vaccinium macrocarpon HOM05D001849 ORTHO05D004689 3.1e-31 138.3 84 75.0
Aa31LG8G1350 Aethionema arabicum HOM05D001849 ORTHO05D004689 4.1e-31 137.9 84 78.6
SalBow7G1889 Salvia bowleyana HOM05D001849 ORTHO05D004689 7.0e-31 137.1 84 75.0
Glyma.07G042000 Glycine max HOM05D001849 ORTHO05D004689 1.2e-30 136.3 91 71.4
AUR62001443 Chenopodium quinoa HOM05D001849 ORTHO05D004689 2.0e-30 135.6 84 75.0
Ciclev10027090m.g Citrus clementina HOM05D001849 ORTHO05D004689 2.0e-30 135.6 88 76.1
Migut.D00924 Erythranthe guttata HOM05D001849 ORTHO05D004689 2.0e-30 135.6 88 75.0
PSO386G0179 Papaver somniferum HOM05D001849 ORTHO05D004689 2.6e-30 135.2 84 76.2
PSO724G1390 Papaver somniferum HOM05D001849 ORTHO05D004689 2.6e-30 135.2 84 76.2
DCAR_026423 Daucus carota HOM05D001849 ORTHO05D004689 4.5e-30 134.4 84 71.4
Rhsim08G0241300 Rhododendron simsii HOM05D001849 ORTHO05D004689 4.5e-30 134.4 84 72.6
Prupe.3G037400 Prunus persica HOM05D001849 ORTHO05D004689 1.0e-29 133.3 87 77.0
Medtr8g022010 Medicago truncatula HOM05D001849 ORTHO05D004689 1.7e-29 132.5 91 70.3
Cfa003503 Carpinus fangiana HOM05D001849 ORTHO05D004689 3.8e-29 131.3 92 73.9
MD17G1148600 Malus domestica HOM05D001849 ORTHO05D004689 1.1e-28 129.8 93 69.9
ATR0681G401 Amborella trichopoda HOM05D001849 ORTHO05D004689 2.5e-28 128.6 84 72.6
Aqoxy7G04006 Aquilegia oxysepala HOM05D001849 ORTHO05D004689 1.2e-27 126.3 84 73.8
AUR62009922 Chenopodium quinoa HOM05D001849 ORTHO05D004689 1.2e-27 126.3 94 67.0
Gorai.006G094800 Gossypium raimondii HOM05D001849 ORTHO05D004689 3.6e-27 124.8 110 60.9
MBI13_g01700_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 3.6e-27 124.8 84 72.6
MD09G1178100 Malus domestica HOM05D001849 ORTHO05D004689 3.6e-27 124.8 87 74.7
TPR.G29992 Trifolium pratense HOM05D001849 ORTHO05D004689 3.6e-27 124.8 106 60.4
VMungo0331G1611 Vigna mungo HOM05D001849 ORTHO05D004689 3.6e-27 124.8 100 63.0
ClCG09G001140 Citrullus lanatus HOM05D001849 ORTHO05D004689 1.4e-26 122.9 142 50.0
Gohir.D09G079550 Gossypium hirsutum HOM05D001849 ORTHO05D004689 1.8e-26 122.5 110 60.0
QL05p003662 Quercus lobata HOM05D001849 ORTHO05D004689 3.0e-26 121.7 107 59.8
Psat4g166880 Pisum sativum HOM05D001849 ORTHO05D004689 4.0e-26 121.3 120 54.2
MELO3C024334.2 Cucumis melo HOM05D001849 ORTHO05D004689 6.7e-26 120.6 88 71.6
Zm00001eb165950 Zea mays HOM05D001849 ORTHO05D004689 8.8e-26 120.2 84 67.9
Hma1.2p1_0229F.1_g096760 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 2.0e-25 119.0 84 70.2
CsaV3_7G034250 Cucumis sativus L. HOM05D001849 ORTHO05D004689 3.3e-25 118.2 88 70.5
unitig_578.g16691 Utricularia gibba HOM05D001849 ORTHO05D004689 4.4e-25 117.9 83 71.1
Actinidia32206 Actinidia chinensis HOM05D001849 ORTHO05D004689 9.7e-25 116.7 85 69.4
Haze_16076 Corylus avellana HOM05D001849 ORTHO05D004689 6.3e-24 114.0 121 54.5
arahy.Tifrunner.gnm1.ann1.1RN2YG Arachis hypogaea HOM05D001849 ORTHO05D004689 7.0e-23 110.5 84 66.7
arahy.Tifrunner.gnm1.ann1.RMM65D Arachis hypogaea HOM05D001849 ORTHO05D004689 7.0e-23 110.5 84 66.7
Phvul.010G127100 Phaseolus vulgaris HOM05D001849 ORTHO05D004689 7.0e-23 110.5 84 69.0
Lj3g0004011 Lotus japonicus HOM05D001849 ORTHO05D004689 3.5e-22 108.2 134 47.8
Ca_23411_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004689 1.3e-21 106.3 98 60.2
CDE06G0404 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 1.7e-21 105.9 84 67.9
Sed0016273 Sechium edule HOM05D001849 ORTHO05D004689 2.2e-21 105.5 90 63.3
Lj9C535G6 Lonicera japonica HOM05D001849 ORTHO05D004689 3.8e-21 104.8 88 63.6
GSVIVG01016717001 Vitis vinifera HOM05D001849 ORTHO05D004689 4.2e-20 101.3 51 92.2
Mapoly0024s0112 Marchantia polymorpha HOM05D001849 ORTHO05D004689 7.2e-20 100.5 91 57.1
CSS0020628 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.6e-19 99.4 95 57.9
Peaxi162Scf00177g00518 Petunia axillaris HOM05D001849 ORTHO05D004689 2.1e-19 99.0 84 60.7
CBR_g39720 Chara braunii HOM05D001849 ORTHO05D004689 6.1e-19 97.4 81 56.8
AagrBONN_evm.TU.Sc2ySwM_362.2383 Anthoceros agrestis HOM05D001849 ORTHO05D004689 3.0e-18 95.1 85 56.5
Hund18672 Selenicereus undatus HOM05D001849 ORTHO05D004689 3.0e-18 95.1 51 86.3
Atru.chr2.1505 Acer truncatum HOM05D001849 ORTHO05D004689 5.2e-18 94.4 52 80.8
SMO304G0023 Selaginella moellendorffii HOM05D001849 ORTHO05D004689 8.8e-18 93.6 84 57.1
Eucgr.K02038 Eucalyptus grandis HOM05D001849 ORTHO05D004689 3.4e-17 91.7 51 78.4
Cc04_g01040 Coffea canephora HOM05D001849 ORTHO05D004689 7.5e-17 90.5 74 62.2
Pp3c8_15880 Physcomitrium patens HOM05D001849 ORTHO05D004689 6.3e-16 87.4 85 49.4
CSS0050059 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 8.3e-16 87.0 84 57.1
CSS0036951 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.1e-15 86.7 84 57.1
CDE07G1134 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 1.4e-15 86.3 51 80.4
MBI03_g16538_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 1.4e-15 86.3 61 70.5
MBI13_g27860_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 1.8e-15 85.9 51 78.4
MBI04_g26258_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 4.1e-15 84.7 54 72.2
SHI25232 Sapria himalayana HOM05D001849 ORTHO05D004689 7.0e-15 84.0 41 90.2
MBI15_g17575_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 1.6e-14 82.8 51 76.5
Hma1.2p1_0229F.1_g096770 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 2.3e-13 79.0 39 92.3
CAN.G1243.9 Capsicum annuum HOM05D001849 ORTHO05D004689 3.8e-13 78.2 41 85.4
MBI18_g40032_MAGBIO Magnolia biondii HOM05D000132 ORTHO05D000058 6.5e-13 77.4 44 77.3
Lalb_Chr10g0101321 Lupinus albus HOM05D001849 ORTHO05D004689 6.1e-11 70.9 45 73.3
HPP92_022009 Vanilla planifolia HOM05D001849 ORTHO05D004689 6.1e-11 70.9 57 57.9
Oeu008524.4 Olea europaea HOM05D001849 ORTHO05D004689 4.0e-10 68.2 86 47.7
Lalb_Chr10g0101331 Lupinus albus HOM05D001849 ORTHO05D004689 2.2e-08 62.4 38 76.3
CSS0003623 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 4.9e-08 61.2 69 52.2
CAN.G1243.8 Capsicum annuum HOM05D001849 ORTHO05D004689 9.2e-07 57.0 31 80.6
CDE07G1706 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 9.2e-07 57.0 31 80.6
Cc04_g01050 Coffea canephora HOM05D001849 ORTHO05D004689 9.2e-07 57.0 31 80.6
TAR626G0833 Trochodendron aralioides HOM05D001849 ORTHO05D004689 3.5e-06 55.1 27 88.9
GSVIVG01016718001 Vitis vinifera HOM05D001849 ORTHO05D004689 5.9e-06 54.3 31 77.4


User provided reference genes

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