Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc169.30 Carica papaya HOM05D001849 ORTHO05D004689 2.6e-94 348.6 162 100.0
Atru.chr2.1505 Acer truncatum HOM05D001849 ORTHO05D004689 2.3e-66 255.8 174 71.3
Dinv20408 Davidia involucrata HOM05D001849 ORTHO05D004689 2.3e-66 255.8 173 72.3
Actinidia32206 Actinidia chinensis HOM05D001849 ORTHO05D004689 5.1e-66 254.6 174 70.1
Manes.11G016400 Manihot esculenta HOM05D001849 ORTHO05D004689 5.1e-66 254.6 174 70.7
CSS0036951 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 8.7e-66 253.8 174 70.7
QL05p003662 Quercus lobata HOM05D001849 ORTHO05D004689 8.7e-66 253.8 174 71.3
Gohir.A09G079900 Gossypium hirsutum HOM05D001849 ORTHO05D004689 1.9e-65 252.7 174 69.5
Thecc.06G124800 Theobroma cacao HOM05D001849 ORTHO05D004689 2.5e-65 252.3 174 69.0
Gorai.006G094800 Gossypium raimondii HOM05D001849 ORTHO05D004689 4.3e-65 251.5 174 69.0
Rhsim08G0241300 Rhododendron simsii HOM05D001849 ORTHO05D004689 4.3e-65 251.5 174 69.5
vmacro15054 Vaccinium macrocarpon HOM05D001849 ORTHO05D004689 4.3e-65 251.5 174 70.1
Duzib235G0671 Durio zibethinus HOM05D001849 ORTHO05D004689 1.6e-64 249.6 174 68.4
Sabra01G0127400 Salix brachista HOM05D001849 ORTHO05D004689 4.8e-64 248.1 174 69.5
CiPaw.01G216000 Carya illinoinensis HOM05D001849 ORTHO05D004689 8.1e-64 247.3 174 69.0
Gohir.D09G079550 Gossypium hirsutum HOM05D001849 ORTHO05D004689 8.1e-64 247.3 174 69.0
Cfa003503 Carpinus fangiana HOM05D001849 ORTHO05D004689 1.1e-63 246.9 174 69.0
Lj9C535G6 Lonicera japonica HOM05D001849 ORTHO05D004689 1.1e-63 246.9 177 67.8
GSVIVG01016717001 Vitis vinifera HOM05D001849 ORTHO05D004689 1.1e-63 246.9 174 67.8
Oeu008524.4 Olea europaea HOM05D001849 ORTHO05D004689 1.8e-63 246.1 187 65.2
COL.COLO4_30797 Corchorus olitorius HOM05D001849 ORTHO05D004689 5.3e-63 244.6 174 68.4
Potri.001G165900 Populus trichocarpa HOM05D001849 ORTHO05D004689 9.0e-63 243.8 174 68.4
MELO3C024334.2 Cucumis melo HOM05D001849 ORTHO05D004689 1.2e-62 243.4 181 64.1
Duzib192G0006 Durio zibethinus HOM05D001849 ORTHO05D004689 1.5e-62 243.0 174 68.4
CSS0050059 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 2.0e-62 242.7 187 64.2
Thhalv10019957m.g Eutrema salsugineum HOM05D001849 ORTHO05D004689 2.0e-62 242.7 177 67.2
MBI13_g01700_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 2.0e-62 242.7 177 65.0
CSS0003623 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 2.6e-62 242.3 120 89.2
Haze_16076 Corylus avellana HOM05D001849 ORTHO05D004689 2.6e-62 242.3 130 84.6
TWI59G1440 Tripterygium wilfordii HOM05D001849 ORTHO05D004689 3.4e-62 241.9 174 67.2
TAR626G0833 Trochodendron aralioides HOM05D001849 ORTHO05D004689 3.4e-62 241.9 174 66.7
CsaV3_7G034250 Cucumis sativus L. HOM05D001849 ORTHO05D004689 4.5e-62 241.5 174 66.1
Sed0016273 Sechium edule HOM05D001849 ORTHO05D004689 4.5e-62 241.5 174 66.1
C01p50480 Brassica napus HOM05D001849 ORTHO05D004689 5.8e-62 241.1 177 66.7
BolC1t05000H Brassica oleracea HOM05D001849 ORTHO05D004689 5.8e-62 241.1 177 66.7
Lj3g0004011 Lotus japonicus HOM05D001849 ORTHO05D004689 7.6e-62 240.7 175 68.0
PSO386G0179 Papaver somniferum HOM05D001849 ORTHO05D004689 7.6e-62 240.7 174 64.9
PSO724G1390 Papaver somniferum HOM05D001849 ORTHO05D004689 7.6e-62 240.7 174 64.9
SGA_v2.0_scaffold4G02078 Striga asiatica HOM05D001849 ORTHO05D004689 7.6e-62 240.7 174 66.7
AL3G26350 Arabidopsis lyrata HOM05D001849 ORTHO05D004689 1.0e-61 240.4 177 66.1
C05p53520 Brassica napus HOM05D001849 ORTHO05D004689 1.0e-61 240.4 177 66.7
Prupe.3G037400 Prunus persica HOM05D001849 ORTHO05D004689 1.0e-61 240.4 174 67.8
Carub.0003s1373 Capsella rubella HOM05D001849 ORTHO05D004689 1.3e-61 240.0 177 66.1
ClCG09G001140 Citrullus lanatus HOM05D001849 ORTHO05D004689 1.3e-61 240.0 174 64.9
A05p35330 Brassica napus HOM05D001849 ORTHO05D004689 1.7e-61 239.6 177 66.7
BraA05t22343Z Brassica rapa HOM05D001849 ORTHO05D004689 1.7e-61 239.6 177 66.7
Migut.D00924 Erythranthe guttata HOM05D001849 ORTHO05D004689 2.2e-61 239.2 172 66.9
A01p39550 Brassica napus HOM05D001849 ORTHO05D004689 3.8e-61 238.4 177 66.1
SHI25232 Sapria himalayana HOM05D001849 ORTHO05D004689 3.8e-61 238.4 180 62.8
Ca_23411_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004689 4.9e-61 238.0 174 67.2
Nitab4.5_0000189g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 4.9e-61 238.0 174 66.7
CAN.G1243.9 Capsicum annuum HOM05D001849 ORTHO05D004689 8.4e-61 237.3 174 66.7
Sp3g12380 Schrenkiella parvula HOM05D001849 ORTHO05D004689 1.4e-60 236.5 177 65.5
EL10Ac7g16444 Beta vulgaris HOM05D001849 ORTHO05D004689 1.9e-60 236.1 174 66.7
BolC5t34029H Brassica oleracea HOM05D001849 ORTHO05D004689 1.9e-60 236.1 177 65.5
CANSAT56G0878 Cannabis sativa HOM05D001849 ORTHO05D004689 1.9e-60 236.1 174 63.8
TPR.G29992 Trifolium pratense HOM05D001849 ORTHO05D004689 3.2e-60 235.3 174 67.2
AT3G14120 Arabidopsis thaliana HOM05D001849 ORTHO05D004689 4.2e-60 235.0 177 64.4
CDE06G0404 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 5.5e-60 234.6 187 59.9
Ciclev10027090m.g Citrus clementina HOM05D001849 ORTHO05D004689 5.5e-60 234.6 174 64.9
THA.LOC104822664 Tarenaya hassleriana HOM05D001849 ORTHO05D004689 7.1e-60 234.2 174 67.2
Cc04_g01040 Coffea canephora HOM05D001849 ORTHO05D004689 9.3e-60 233.8 174 64.4
Medtr8g022010 Medicago truncatula HOM05D001849 ORTHO05D004689 1.2e-59 233.4 174 65.5
AUR62001443 Chenopodium quinoa HOM05D001849 ORTHO05D004689 1.6e-59 233.0 174 66.1
AUR62009922 Chenopodium quinoa HOM05D001849 ORTHO05D004689 1.6e-59 233.0 174 66.1
Eucgr.K02038 Eucalyptus grandis HOM05D001849 ORTHO05D004689 1.6e-59 233.0 174 64.9
Solyc12g049410.3 Solanum lycopersicum HOM05D001849 ORTHO05D004689 2.1e-59 232.6 174 65.5
Sopen12g023890 Solanum pennellii HOM05D001849 ORTHO05D004689 2.1e-59 232.6 174 65.5
Aa31LG8G1350 Aethionema arabicum HOM05D001849 ORTHO05D004689 3.5e-59 231.9 177 65.0
Hund18672 Selenicereus undatus HOM05D001849 ORTHO05D004689 4.6e-59 231.5 174 64.9
CDE07G1134 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 6.0e-59 231.1 175 62.9
arahy.Tifrunner.gnm1.ann1.1RN2YG Arachis hypogaea HOM05D001849 ORTHO05D004689 7.9e-59 230.7 174 65.5
arahy.Tifrunner.gnm1.ann1.RMM65D Arachis hypogaea HOM05D001849 ORTHO05D004689 7.9e-59 230.7 174 65.5
Peaxi162Scf00177g00518 Petunia axillaris HOM05D001849 ORTHO05D004689 7.9e-59 230.7 174 64.9
Psat4g166880 Pisum sativum HOM05D001849 ORTHO05D004689 1.0e-58 230.3 174 65.5
Lalb_Chr10g0101321 Lupinus albus HOM05D001849 ORTHO05D004689 1.3e-58 229.9 174 64.4
MD09G1178100 Malus domestica HOM05D001849 ORTHO05D004689 2.3e-58 229.2 121 85.1
PGR119G1999 Punica granatum HOM05D001849 ORTHO05D004689 3.0e-58 228.8 121 83.5
VMungo0331G1611 Vigna mungo HOM05D001849 ORTHO05D004689 5.1e-58 228.0 174 65.5
Glyma.07G042000 Glycine max HOM05D001849 ORTHO05D004689 8.7e-58 227.3 174 63.8
FAN02G0489 Fragaria x ananassa HOM05D001849 ORTHO05D004689 1.5e-57 226.5 175 64.6
Phvul.010G127100 Phaseolus vulgaris HOM05D001849 ORTHO05D004689 1.5e-57 226.5 174 64.9
BcaC05g29121 Brassica carinata HOM05D001849 ORTHO05D004689 2.5e-57 225.7 177 63.8
FvH4_6g35170 Fragaria vesca HOM05D001849 ORTHO05D004689 2.5e-57 225.7 174 64.9
Zm00001eb165950 Zea mays HOM05D001849 ORTHO05D004689 2.5e-57 225.7 174 61.5
FAN09G4066 Fragaria x ananassa HOM05D001849 ORTHO05D004689 4.3e-57 224.9 174 64.4
DCAR_026423 Daucus carota HOM05D001849 ORTHO05D004689 5.7e-57 224.6 174 63.2
FAN05G2930 Fragaria x ananassa HOM05D001849 ORTHO05D004689 5.7e-57 224.6 174 64.4
FAN14G1459 Fragaria x ananassa HOM05D001849 ORTHO05D004689 9.6e-57 223.8 174 64.4
ATR0681G401 Amborella trichopoda HOM05D001849 ORTHO05D004689 1.3e-56 223.4 139 74.1
Aqoxy7G04006 Aquilegia oxysepala HOM05D001849 ORTHO05D004689 1.3e-56 223.4 121 81.8
Lsat_1_v5_gn_4_91381 Lactuca sativa HOM05D001849 ORTHO05D004689 2.8e-56 222.2 174 62.1
SalBow7G1889 Salvia bowleyana HOM05D001849 ORTHO05D004689 3.7e-56 221.9 187 59.9
RcHm_v2.0_Chr2g0146431 Rosa chinensis HOM05D001849 ORTHO05D004689 4.8e-56 221.5 121 81.8
Hma1.2p1_0229F.1_g096760 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 1.8e-55 219.5 174 63.8
Hma1.2p1_0229F.1_g096770 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 1.8e-55 219.5 174 63.8
ECA232G2821 Erigeron canadensis HOM05D001849 ORTHO05D004689 2.4e-55 219.2 174 60.3
HanXRQChr09g0277131 Helianthus annuus HOM05D001849 ORTHO05D004689 6.9e-55 217.6 174 59.8
unitig_578.g16691 Utricularia gibba HOM05D001849 ORTHO05D004689 3.4e-54 215.3 121 76.0
HPP92_022009 Vanilla planifolia HOM05D001849 ORTHO05D004689 2.2e-53 212.6 121 75.2
CSS0020628 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 2.5e-52 209.1 177 59.9
MD17G1148600 Malus domestica HOM05D001849 ORTHO05D004689 6.7e-50 201.1 108 84.3
Pp3c8_15880 Physcomitrium patens HOM05D001849 ORTHO05D004689 8.2e-40 167.5 122 65.6
FAN05G4033 Fragaria x ananassa HOM05D001849 ORTHO05D004689 3.1e-39 165.6 141 61.0
AagrBONN_evm.TU.Sc2ySwM_362.2383 Anthoceros agrestis HOM05D001849 ORTHO05D004689 7.7e-38 161.0 122 63.1
SMO304G0023 Selaginella moellendorffii HOM05D001849 ORTHO05D004689 3.0e-34 149.1 122 58.2
Mapoly0024s0112 Marchantia polymorpha HOM05D001849 ORTHO05D004689 6.7e-34 147.9 133 56.4
SEGI_30532 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 8.2e-32 141.0 89 73.0
CBR_g39720 Chara braunii HOM05D001849 ORTHO05D004689 1.9e-28 129.8 131 50.4
Cre10.g425675 Chlamydomonas reinhardtii HOM05D001849 ORTHO05D004689 5.2e-10 68.6 132 33.3
PRCOL_00005073 Prasinoderma coloniale HOM05D001849 ORTHO05D004689 4.9e-08 62.0 140 31.4


User provided reference genes

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