Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc169.29 Carica papaya HOM05D001849 ORTHO05D004689 1.6e-106 389.4 190 100.0
Gohir.A09G079900 Gossypium hirsutum HOM05D001849 ORTHO05D004689 4.6e-34 148.7 99 73.7
Gohir.D09G079550 Gossypium hirsutum HOM05D001849 ORTHO05D004689 4.6e-34 148.7 99 73.7
Manes.11G016400 Manihot esculenta HOM05D001849 ORTHO05D004689 6.0e-34 148.3 99 73.7
Thecc.06G124800 Theobroma cacao HOM05D001849 ORTHO05D004689 1.1e-32 144.1 99 71.7
Duzib192G0006 Durio zibethinus HOM05D001849 ORTHO05D004689 2.5e-32 142.9 99 71.7
COL.COLO4_30797 Corchorus olitorius HOM05D001849 ORTHO05D004689 4.3e-32 142.1 99 70.7
Duzib235G0671 Durio zibethinus HOM05D001849 ORTHO05D004689 7.4e-32 141.4 99 70.7
Atru.chr2.1505 Acer truncatum HOM05D001849 ORTHO05D004689 2.4e-30 136.3 106 64.2
Sabra01G0127400 Salix brachista HOM05D001849 ORTHO05D004689 1.2e-29 134.0 99 67.7
Gorai.006G094800 Gossypium raimondii HOM05D001849 ORTHO05D004689 3.4e-29 132.5 99 68.7
GSVIVG01016717001 Vitis vinifera HOM05D001849 ORTHO05D004689 3.4e-29 132.5 99 67.7
VMungo0331G1611 Vigna mungo HOM05D001849 ORTHO05D004689 1.0e-28 131.0 99 61.6
Potri.001G165900 Populus trichocarpa HOM05D001849 ORTHO05D004689 1.3e-28 130.6 99 66.7
Glyma.07G042000 Glycine max HOM05D001849 ORTHO05D004689 1.7e-28 130.2 93 65.6
TWI59G1440 Tripterygium wilfordii HOM05D001849 ORTHO05D004689 1.7e-28 130.2 99 61.6
Eucgr.K02038 Eucalyptus grandis HOM05D001849 ORTHO05D004689 2.9e-28 129.4 99 64.6
Phvul.010G127100 Phaseolus vulgaris HOM05D001849 ORTHO05D004689 2.9e-28 129.4 99 61.6
TAR626G0833 Trochodendron aralioides HOM05D001849 ORTHO05D004689 8.4e-28 127.9 99 64.6
PGR119G1999 Punica granatum HOM05D001849 ORTHO05D004689 1.1e-27 127.5 99 64.6
CiPaw.01G216000 Carya illinoinensis HOM05D001849 ORTHO05D004689 2.5e-27 126.3 99 63.6
Lj9C535G6 Lonicera japonica HOM05D001849 ORTHO05D004689 2.5e-27 126.3 99 64.6
Lj3g0004011 Lotus japonicus HOM05D001849 ORTHO05D004689 4.2e-27 125.6 99 60.6
arahy.Tifrunner.gnm1.ann1.1RN2YG Arachis hypogaea HOM05D001849 ORTHO05D004689 5.5e-27 125.2 99 60.6
Prupe.3G037400 Prunus persica HOM05D001849 ORTHO05D004689 5.5e-27 125.2 99 62.6
MD17G1148600 Malus domestica HOM05D001849 ORTHO05D004689 7.2e-27 124.8 99 62.6
Ciclev10027090m.g Citrus clementina HOM05D001849 ORTHO05D004689 9.3e-27 124.4 99 61.6
Psat4g166880 Pisum sativum HOM05D001849 ORTHO05D004689 1.2e-26 124.0 99 57.6
arahy.Tifrunner.gnm1.ann1.RMM65D Arachis hypogaea HOM05D001849 ORTHO05D004689 2.1e-26 123.2 99 59.6
Lalb_Chr10g0101321 Lupinus albus HOM05D001849 ORTHO05D004689 3.5e-26 122.5 93 61.3
TPR.G29992 Trifolium pratense HOM05D001849 ORTHO05D004689 3.5e-26 122.5 93 62.4
AUR62001443 Chenopodium quinoa HOM05D001849 ORTHO05D004689 4.6e-26 122.1 94 67.0
THA.LOC104822664 Tarenaya hassleriana HOM05D001849 ORTHO05D004689 4.6e-26 122.1 99 59.6
BcaC05g29121 Brassica carinata HOM05D001849 ORTHO05D004689 7.9e-26 121.3 99 61.6
C05p53520 Brassica napus HOM05D001849 ORTHO05D004689 7.9e-26 121.3 99 61.6
AUR62009922 Chenopodium quinoa HOM05D001849 ORTHO05D004689 1.0e-25 120.9 94 67.0
MD09G1178100 Malus domestica HOM05D001849 ORTHO05D004689 1.0e-25 120.9 99 60.6
BraA05t22343Z Brassica rapa HOM05D001849 ORTHO05D004689 1.8e-25 120.2 99 60.6
DCAR_026423 Daucus carota HOM05D001849 ORTHO05D004689 1.8e-25 120.2 99 60.6
BolC5t34029H Brassica oleracea HOM05D001849 ORTHO05D004689 2.3e-25 119.8 99 58.6
CANSAT56G0878 Cannabis sativa HOM05D001849 ORTHO05D004689 2.3e-25 119.8 99 59.6
vmacro15054 Vaccinium macrocarpon HOM05D001849 ORTHO05D004689 2.3e-25 119.8 99 60.6
Actinidia32206 Actinidia chinensis HOM05D001849 ORTHO05D004689 3.9e-25 119.0 99 61.6
Aa31LG8G1350 Aethionema arabicum HOM05D001849 ORTHO05D004689 3.9e-25 119.0 99 60.6
EL10Ac7g16444 Beta vulgaris HOM05D001849 ORTHO05D004689 3.9e-25 119.0 99 60.6
Rhsim08G0241300 Rhododendron simsii HOM05D001849 ORTHO05D004689 5.1e-25 118.6 100 61.0
CSS0036461 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 6.7e-25 118.2 98 63.3
Dinv20408 Davidia involucrata HOM05D001849 ORTHO05D004689 6.7e-25 118.2 106 60.4
Medtr8g022010 Medicago truncatula HOM05D001849 ORTHO05D004689 6.7e-25 118.2 94 61.7
CSS0036951 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 8.7e-25 117.9 99 60.6
Hund18672 Selenicereus undatus HOM05D001849 ORTHO05D004689 8.7e-25 117.9 99 59.6
Aqoxy7G04006 Aquilegia oxysepala HOM05D001849 ORTHO05D004689 1.1e-24 117.5 99 57.6
AT3G14120 Arabidopsis thaliana HOM05D001849 ORTHO05D004689 1.1e-24 117.5 99 59.6
Thhalv10019957m.g Eutrema salsugineum HOM05D001849 ORTHO05D004689 1.1e-24 117.5 99 59.6
MBI13_g01700_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 1.1e-24 117.5 99 60.6
AL3G26350 Arabidopsis lyrata HOM05D001849 ORTHO05D004689 1.5e-24 117.1 99 59.6
Carub.0003s1373 Capsella rubella HOM05D001849 ORTHO05D004689 1.5e-24 117.1 99 59.6
FAN09G4066 Fragaria x ananassa HOM05D001849 ORTHO05D004689 1.9e-24 116.7 99 59.6
ATR0681G401 Amborella trichopoda HOM05D001849 ORTHO05D004689 2.5e-24 116.3 99 57.6
C01p50480 Brassica napus HOM05D001849 ORTHO05D004689 2.5e-24 116.3 99 58.6
BolC1t05000H Brassica oleracea HOM05D001849 ORTHO05D004689 2.5e-24 116.3 99 58.6
Migut.D00924 Erythranthe guttata HOM05D001849 ORTHO05D004689 2.5e-24 116.3 120 53.3
QL05p003662 Quercus lobata HOM05D001849 ORTHO05D004689 3.3e-24 115.9 99 59.6
CSS0020628 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 4.3e-24 115.5 99 60.6
CSS0036362 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 4.3e-24 115.5 93 63.4
A05p35330 Brassica napus HOM05D001849 ORTHO05D004689 5.7e-24 115.2 99 58.6
Hma1.2p1_0229F.1_g096760 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 5.7e-24 115.2 99 59.6
Hma1.2p1_0229F.1_g096770 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 5.7e-24 115.2 99 59.6
FvH4_6g35170 Fragaria vesca HOM05D001849 ORTHO05D004689 7.4e-24 114.8 99 58.6
PSO386G0179 Papaver somniferum HOM05D001849 ORTHO05D004689 9.7e-24 114.4 99 57.6
A01p39550 Brassica napus HOM05D001849 ORTHO05D004689 1.3e-23 114.0 99 58.6
CsaV3_7G034250 Cucumis sativus L. HOM05D001849 ORTHO05D004689 2.2e-23 113.2 99 58.6
FAN14G1459 Fragaria x ananassa HOM05D001849 ORTHO05D004689 2.2e-23 113.2 99 57.6
Cc04_g01040 Coffea canephora HOM05D001849 ORTHO05D004689 2.8e-23 112.8 99 58.6
Ca_23411_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004689 3.7e-23 112.5 99 56.6
RcHm_v2.0_Chr2g0146431 Rosa chinensis HOM05D001849 ORTHO05D004689 3.7e-23 112.5 99 56.6
Sp3g12380 Schrenkiella parvula HOM05D001849 ORTHO05D004689 3.7e-23 112.5 99 55.6
Sed0016273 Sechium edule HOM05D001849 ORTHO05D004689 3.7e-23 112.5 99 59.6
FAN05G2930 Fragaria x ananassa HOM05D001849 ORTHO05D004689 4.8e-23 112.1 99 56.6
PSO724G1390 Papaver somniferum HOM05D001849 ORTHO05D004689 4.8e-23 112.1 100 57.0
FAN02G0489 Fragaria x ananassa HOM05D001849 ORTHO05D004689 1.1e-22 110.9 99 57.6
Nitab4.5_0004322g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 2.4e-22 109.8 99 55.6
SGA_v2.0_scaffold4G02078 Striga asiatica HOM05D001849 ORTHO05D004689 2.4e-22 109.8 99 53.5
ClCG09G001140 Citrullus lanatus HOM05D001849 ORTHO05D004689 4.1e-22 109.0 99 55.6
Peaxi162Scf00177g00518 Petunia axillaris HOM05D001849 ORTHO05D004689 5.3e-22 108.6 99 55.6
CSS0003623 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 6.9e-22 108.2 89 60.7
MELO3C024334.2 Cucumis melo HOM05D001849 ORTHO05D004689 9.0e-22 107.8 93 59.1
Nitab4.5_0000189g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 9.0e-22 107.8 99 54.5
CAN.G1243.9 Capsicum annuum HOM05D001849 ORTHO05D004689 2.0e-21 106.7 99 56.6
Cfa003503 Carpinus fangiana HOM05D001849 ORTHO05D004689 2.0e-21 106.7 99 54.5
Solyc12g049410.3 Solanum lycopersicum HOM05D001849 ORTHO05D004689 2.6e-21 106.3 99 58.6
Sopen12g023890 Solanum pennellii HOM05D001849 ORTHO05D004689 2.6e-21 106.3 99 58.6
HanXRQChr09g0277131 Helianthus annuus HOM05D001849 ORTHO05D004689 7.7e-21 104.8 100 57.0
Lsat_1_v5_gn_4_91381 Lactuca sativa HOM05D001849 ORTHO05D004689 1.3e-20 104.0 99 57.6
SalBow7G1889 Salvia bowleyana HOM05D001849 ORTHO05D004689 1.7e-20 103.6 99 54.5
SHI25232 Sapria himalayana HOM05D001849 ORTHO05D004689 5.0e-20 102.1 87 58.6
unitig_578.g16691 Utricularia gibba HOM05D001849 ORTHO05D004689 3.2e-19 99.4 99 51.5
Haze_16076 Corylus avellana HOM05D001849 ORTHO05D004689 2.1e-18 96.7 93 51.6
Oeu008524.4 Olea europaea HOM05D001849 ORTHO05D004689 6.1e-18 95.1 99 48.5
ECA232G2821 Erigeron canadensis HOM05D001849 ORTHO05D004689 2.3e-17 93.2 93 57.0
Zm00001eb165950 Zea mays HOM05D001849 ORTHO05D004689 3.0e-17 92.8 99 49.5
SEGI_11558 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 6.7e-17 91.7 93 49.5
HPP92_022009 Vanilla planifolia HOM05D001849 ORTHO05D004689 9.7e-16 87.8 102 48.0
PGSC0003DMG402004368 Solanum tuberosum HOM05D001849 ORTHO05D004689 3.4e-13 79.3 73 61.6
Lsat_1_v5_gn_3_42421 Lactuca sativa HOM05D001849 ORTHO05D004689 7.7e-13 78.2 84 52.4
CDE06G0404 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 2.9e-12 76.3 52 67.3
CSS0004697 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 3.8e-12 75.9 98 46.9
CDE07G1134 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 5.0e-12 75.5 52 65.4
Mapoly0024s0112 Marchantia polymorpha HOM05D001849 ORTHO05D004689 8.5e-12 74.7 99 43.4
AagrBONN_evm.TU.Sc2ySwM_362.2383 Anthoceros agrestis HOM05D001849 ORTHO05D004689 9.4e-11 71.2 122 34.4
CSS0050059 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 2.1e-10 70.1 89 43.8
Pp3c8_15880 Physcomitrium patens HOM05D001849 ORTHO05D004689 7.9e-10 68.2 103 35.9
Lsat_1_v5_gn_7_52500 Lactuca sativa HOM05D001849 ORTHO05D004689 3.3e-08 62.8 73 50.7
SMO304G0023 Selaginella moellendorffii HOM05D001849 ORTHO05D004689 1.3e-07 60.8 93 36.6
Cpa.g.sc670.2 Carica papaya HOM05D000003 ORTHO05D000004 9.1e-06 54.7 52 51.9


User provided reference genes

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