Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc14.41 Carica papaya HOM05D004526 ORTHO05D005548 1.3e-76 289.7 150 100.0
Haze_14584 Corylus avellana HOM05D004526 ORTHO05D005548 2.3e-52 209.1 132 79.5
Cfa007509 Carpinus fangiana HOM05D004526 ORTHO05D005548 1.1e-51 206.8 132 78.8
CiPaw.04G020200 Carya illinoinensis HOM05D004526 ORTHO05D005548 3.3e-51 205.3 132 78.8
CiPaw.03G030200 Carya illinoinensis HOM05D004526 ORTHO05D005548 1.2e-50 203.4 132 77.3
Duzib147G0459 Durio zibethinus HOM05D004526 ORTHO05D005548 1.2e-50 203.4 133 78.9
Lj5g0010112 Lotus japonicus HOM05D004526 ORTHO05D004861 4.7e-50 201.4 133 78.9
Manes.17G021000 Manihot esculenta HOM05D004526 ORTHO05D005548 4.7e-50 201.4 129 81.4
Glyma.20G242900 Glycine max HOM05D004526 ORTHO05D005548 6.2e-50 201.1 128 80.5
Thecc.04G074400 Theobroma cacao HOM05D004526 ORTHO05D005548 1.8e-49 199.5 133 78.2
COL.COLO4_25181 Corchorus olitorius HOM05D004526 ORTHO05D005548 2.4e-49 199.1 133 78.2
Dinv07025 Davidia involucrata HOM05D004526 ORTHO05D005548 5.2e-49 198.0 130 80.0
Glyma.10G292700 Glycine max HOM05D004526 ORTHO05D005548 5.2e-49 198.0 128 80.5
VMungo0720G0008 Vigna mungo HOM05D004526 ORTHO05D005548 5.2e-49 198.0 128 78.1
QL02p080561 Quercus lobata HOM05D004526 ORTHO05D005548 9.0e-49 197.2 132 76.5
Gohir.A05G364100 Gossypium hirsutum HOM05D004526 ORTHO05D005548 1.2e-48 196.8 134 77.6
Gohir.D04G050600 Gossypium hirsutum HOM05D004526 ORTHO05D005548 1.2e-48 196.8 134 77.6
Gorai.012G056100 Gossypium raimondii HOM05D004526 ORTHO05D005548 1.2e-48 196.8 134 77.6
Actinidia06070 Actinidia chinensis HOM05D004526 ORTHO05D005548 2.6e-48 195.7 131 78.6
THA.LOC104811064 Tarenaya hassleriana HOM05D004526 ORTHO05D005548 2.6e-48 195.7 130 76.9
Lalb_Chr21g0307111 Lupinus albus HOM05D004526 ORTHO05D005548 4.4e-48 194.9 132 75.8
CSS0019571 Camellia sinensis var. sinensis HOM05D004526 ORTHO05D005548 5.8e-48 194.5 130 77.7
TAR622G0275 Trochodendron aralioides HOM05D004526 ORTHO05D005548 5.8e-48 194.5 131 76.3
GSVIVG01032607001 Vitis vinifera HOM05D004526 ORTHO05D005548 9.9e-48 193.7 114 82.5
Ca_11340_v3 Cicer arietinum L. HOM05D004526 ORTHO05D005548 1.3e-47 193.4 131 77.9
Phvul.007G007300 Phaseolus vulgaris HOM05D004526 ORTHO05D005548 1.3e-47 193.4 128 75.8
TAR481G0009 Trochodendron aralioides HOM05D004526 ORTHO05D005548 2.2e-47 192.6 128 73.4
Atru.chr8.1914 Acer truncatum HOM05D004526 ORTHO05D005548 6.4e-47 191.0 131 73.3
Lj7A401T78 Lonicera japonica HOM05D004526 ORTHO05D005548 8.4e-47 190.7 130 73.8
Sed0004091 Sechium edule HOM05D004526 ORTHO05D005548 8.4e-47 190.7 128 73.4
Cc08_g10980 Coffea canephora HOM05D004526 ORTHO05D005548 1.4e-46 189.9 128 78.1
MELO3C021974.2 Cucumis melo HOM05D004526 ORTHO05D005548 1.9e-46 189.5 128 72.7
Prupe.3G272100 Prunus persica HOM05D004526 ORTHO05D005548 1.9e-46 189.5 130 76.2
CsaV3_5G037880 Cucumis sativus L. HOM05D004526 ORTHO05D005548 3.2e-46 188.7 128 72.7
MSTRG.1703 Avicennia marina HOM05D004526 ORTHO05D005548 4.2e-46 188.3 130 74.6
Nn4g23045 Nelumbo nucifera HOM05D004526 ORTHO05D005548 9.3e-46 187.2 134 75.4
Psat6g239400 Pisum sativum HOM05D004526 ORTHO05D005548 9.3e-46 187.2 130 76.2
Carub.0003s0384 Capsella rubella HOM05D004526 ORTHO05D005548 1.6e-45 186.4 133 72.2
Thhalv10020725m.g Eutrema salsugineum HOM05D004526 ORTHO05D005548 1.6e-45 186.4 133 72.9
Solyc01g009290.4 Solanum lycopersicum HOM05D004526 ORTHO05D005548 1.6e-45 186.4 130 73.1
Sopen01g004780 Solanum pennellii HOM05D004526 ORTHO05D005548 1.6e-45 186.4 130 73.1
PGSC0003DMG400030284 Solanum tuberosum HOM05D004526 ORTHO05D005548 1.6e-45 186.4 130 73.1
arahy.Tifrunner.gnm1.ann1.S1RF4U Arachis hypogaea HOM05D004526 ORTHO05D005548 2.1e-45 186.0 129 76.0
BcaB04g19307 Brassica carinata HOM05D004526 ORTHO05D005548 2.1e-45 186.0 134 71.6
ClCG09G018400 Citrullus lanatus HOM05D004526 ORTHO05D005548 2.1e-45 186.0 129 72.9
Lsat_1_v5_gn_4_176840 Lactuca sativa HOM05D004526 ORTHO05D005548 2.1e-45 186.0 130 75.4
Nitab4.5_0001504g0050 Nicotiana tabacum HOM05D004526 ORTHO05D005548 2.1e-45 186.0 130 73.8
Oeu018626.2 Olea europaea HOM05D004526 ORTHO05D005548 2.1e-45 186.0 126 75.4
Sp3g03530 Schrenkiella parvula HOM05D004526 ORTHO05D005548 2.1e-45 186.0 130 73.1
PGR142G4111 Punica granatum HOM05D004526 ORTHO05D005548 2.7e-45 185.7 128 75.0
Migut.E01591 Erythranthe guttata HOM05D004526 ORTHO05D005548 3.5e-45 185.3 130 71.5
Peaxi162Scf00345g00811 Petunia axillaris HOM05D004526 ORTHO05D005548 3.5e-45 185.3 130 73.1
vmacro05738 Vaccinium macrocarpon HOM05D004526 ORTHO05D005548 3.5e-45 185.3 132 73.5
AT3G04680 Arabidopsis thaliana HOM05D004526 ORTHO05D005548 4.6e-45 184.9 133 70.7
Ciclev10011737m.g Citrus clementina HOM05D004526 ORTHO05D005548 4.6e-45 184.9 132 75.8
A03p33780 Brassica napus HOM05D004526 ORTHO05D005548 7.8e-45 184.1 134 71.6
BraA03t12552Z Brassica rapa HOM05D004526 ORTHO05D005548 7.8e-45 184.1 134 71.6
Dinv06512 Davidia involucrata HOM05D004526 ORTHO05D005548 7.8e-45 184.1 138 71.0
Nitab4.5_0000157g0090 Nicotiana tabacum HOM05D004526 ORTHO05D005548 7.8e-45 184.1 130 74.6
RcHm_v2.0_Chr2g0169161 Rosa chinensis HOM05D004526 ORTHO05D005548 7.8e-45 184.1 118 76.3
PSO017G3834 Papaver somniferum HOM05D004526 ORTHO05D005548 1.0e-44 183.7 130 70.8
PSO478G0915 Papaver somniferum HOM05D004526 ORTHO05D005548 1.0e-44 183.7 130 71.5
Potri.017G077200 Populus trichocarpa HOM05D004526 ORTHO05D005548 1.0e-44 183.7 128 75.8
Aa31LG5G15080 Aethionema arabicum HOM05D004526 ORTHO05D005548 1.3e-44 183.3 134 71.6
CARHR078910 Cardamine hirsuta HOM05D004526 ORTHO05D005548 1.3e-44 183.3 133 70.7
RhsimUnG0055200 Rhododendron simsii HOM05D004526 ORTHO05D005548 1.3e-44 183.3 133 72.2
arahy.Tifrunner.gnm1.ann1.31SG4H Arachis hypogaea HOM05D004526 ORTHO05D005548 1.7e-44 183.0 129 75.2
FAN09G4881 Fragaria x ananassa HOM05D004526 ORTHO05D005548 1.7e-44 183.0 118 75.4
FAN14G2223 Fragaria x ananassa HOM05D004526 ORTHO05D005548 1.7e-44 183.0 118 75.4
CAN.G226.26 Capsicum annuum HOM05D004526 ORTHO05D005548 2.3e-44 182.6 130 72.3
FAN02G4162 Fragaria x ananassa HOM05D004526 ORTHO05D005548 2.3e-44 182.6 118 75.4
HanXRQChr09g0265571 Helianthus annuus HOM05D004526 ORTHO05D005548 3.9e-44 181.8 129 74.4
arahy.Tifrunner.gnm1.ann1.PC3EEW Arachis hypogaea HOM05D004526 ORTHO05D005548 5.1e-44 181.4 129 74.4
BcaC01g04355 Brassica carinata HOM05D004526 ORTHO05D005548 5.1e-44 181.4 135 70.4
C03p41080 Brassica napus HOM05D004526 ORTHO05D005548 5.1e-44 181.4 135 70.4
BolC3t16397H Brassica oleracea HOM05D004526 ORTHO05D005548 5.1e-44 181.4 135 70.4
PGR142G2860 Punica granatum HOM05D004526 ORTHO05D005548 8.7e-44 180.6 128 72.7
TWI60G0005 Tripterygium wilfordii HOM05D004526 ORTHO05D005548 8.7e-44 180.6 128 75.8
AL3G14740 Arabidopsis lyrata HOM05D004526 ORTHO05D005548 1.5e-43 179.9 132 69.7
Eucgr.I01917 Eucalyptus grandis HOM05D004526 ORTHO05D005548 1.5e-43 179.9 128 72.7
Aqoxy3G03268 Aquilegia oxysepala HOM05D004526 ORTHO05D005548 2.5e-43 179.1 128 70.3
FvH4_6g49260 Fragaria vesca HOM05D004526 ORTHO05D005548 2.5e-43 179.1 118 74.6
FAN05G4948 Fragaria x ananassa HOM05D004526 ORTHO05D005548 3.3e-43 178.7 118 72.9
Medtr1g116060 Medicago truncatula HOM05D004526 ORTHO05D005548 3.3e-43 178.7 129 73.6
Sc11g0006930 Simmondsia chinensis HOM05D004526 ORTHO05D005548 3.3e-43 178.7 117 76.9
Hund13244 Selenicereus undatus HOM05D004526 ORTHO05D005548 7.3e-43 177.6 114 76.3
TAR305G0002 Trochodendron aralioides HOM05D004526 ORTHO05D005548 1.6e-42 176.4 131 70.2
Nn3g17130 Nelumbo nucifera HOM05D004526 ORTHO05D005548 2.1e-42 176.0 138 68.1
arahy.Tifrunner.gnm1.ann1.C6A6VI Arachis hypogaea HOM05D004526 ORTHO05D005548 3.6e-42 175.3 129 72.1
unitig_578.g15969 Utricularia gibba HOM05D004526 ORTHO05D005548 1.8e-41 172.9 130 68.5
EL10Ac2g02933 Beta vulgaris HOM05D004526 ORTHO05D005548 2.4e-41 172.6 111 74.8
PSO591G0197 Papaver somniferum HOM05D004526 ORTHO05D005548 3.1e-41 172.2 132 67.4
PSO832G1140 Papaver somniferum HOM05D004526 ORTHO05D005548 4.0e-41 171.8 132 67.4
DCAR_021672 Daucus carota HOM05D004526 ORTHO05D005548 1.5e-40 169.9 114 73.7
SalBow1G4721 Salvia bowleyana HOM05D004526 ORTHO05D005548 2.6e-40 169.1 130 68.5
HanXRQChr12g0357441 Helianthus annuus HOM05D004526 ORTHO05D005548 2.9e-39 165.6 128 68.0
MD17G1047000 Malus domestica HOM05D004526 ORTHO05D005548 4.2e-38 161.8 135 65.9
ECA232G3358 Erigeron canadensis HOM05D004526 ORTHO05D005548 1.2e-37 160.2 130 65.4
CDE04G0248 Ceratophyllum demersum HOM05D004526 ORTHO05D005548 2.7e-37 159.1 110 70.9
HPP92_012836 Vanilla planifolia HOM05D004526 ORTHO05D005548 3.5e-37 158.7 111 69.4
SHI08813 Sapria himalayana HOM05D004526 ORTHO05D005548 6.0e-37 157.9 110 69.1
ATR0051G026 Amborella trichopoda HOM05D004526 ORTHO05D005548 7.9e-37 157.5 108 74.1
MD09G1046200 Malus domestica HOM05D004526 ORTHO05D005548 2.3e-36 156.0 128 65.6
CSS0012548 Camellia sinensis var. sinensis HOM05D004526 ORTHO05D005548 3.0e-36 155.6 94 80.9
Sp1g35350 Schrenkiella parvula HOM05D004526 ORTHO05D005548 3.9e-36 155.2 126 65.1
CSS0008092 Camellia sinensis var. sinensis HOM05D004526 ORTHO05D005548 1.9e-35 152.9 94 79.8
SEGI_10762 Sequoiadendron giganteum HOM05D004526 ORTHO05D005548 3.3e-35 152.1 115 67.0
Sabra17G0069000 Salix brachista HOM05D004526 ORTHO05D005548 5.3e-33 144.8 132 62.9
Zm00001eb205260 Zea mays HOM05D004526 ORTHO05D005548 3.4e-32 142.1 122 58.2
Actinidia27487 Actinidia chinensis HOM05D004526 ORTHO05D005548 4.9e-31 138.3 138 60.9
AagrBONN_evm.TU.Sc2ySwM_344.3939 Anthoceros agrestis HOM05D004526 ORTHO05D005548 4.9e-31 138.3 134 57.5
Os02g0217500 Oryza sativa ssp. japonica HOM05D004526 ORTHO05D005548 6.4e-31 137.9 132 53.8
Mapoly0016s0080 Marchantia polymorpha HOM05D004526 ORTHO05D005548 8.4e-31 137.5 118 54.2
SMO165G0052 Selaginella moellendorffii HOM05D004526 ORTHO05D005548 8.4e-31 137.5 101 64.4
HPP92_009728 Vanilla planifolia HOM05D004526 ORTHO05D005548 3.2e-30 135.6 114 59.6
BcaC02g08842 Brassica carinata HOM05D004526 ORTHO05D005548 1.8e-28 129.8 133 53.4
C04p49900 Brassica napus HOM05D004526 ORTHO05D005548 1.8e-28 129.8 133 53.4
AT5G39930 Arabidopsis thaliana HOM05D004526 ORTHO05D005548 1.9e-27 126.3 111 54.1
arahy.Tifrunner.gnm1.ann1.TUDV7U Arachis hypogaea HOM05D004526 ORTHO05D005548 3.3e-27 125.6 127 56.7
AL7G50210 Arabidopsis lyrata HOM05D004526 ORTHO05D005548 2.1e-26 122.9 111 56.8
BcaB06g27742 Brassica carinata HOM05D004526 ORTHO05D005548 4.8e-26 121.7 111 53.2
A04p15620 Brassica napus HOM05D004526 ORTHO05D005548 1.1e-25 120.6 133 51.1
BraA04t17197Z Brassica rapa HOM05D004526 ORTHO05D005548 1.1e-25 120.6 133 51.1
Carub.0007s3580 Capsella rubella HOM05D004526 ORTHO05D005548 1.1e-25 120.6 112 58.9
MD09G1046500 Malus domestica HOM05D004526 ORTHO05D005548 6.9e-25 117.9 149 49.7
arahy.Tifrunner.gnm1.ann1.QUI3Q9 Arachis hypogaea HOM05D004526 ORTHO05D005548 1.2e-24 117.1 76 72.4
CBR_g42172 Chara braunii HOM05D004526 ORTHO05D005548 1.5e-24 116.7 113 55.8
BolC4t26581H Brassica oleracea HOM05D004526 ORTHO05D005548 2.0e-24 116.3 103 56.3
Thhalv10028283m.g Eutrema salsugineum HOM05D004526 ORTHO05D005548 1.6e-21 106.7 106 50.9
arahy.Tifrunner.gnm1.ann1.HJC8LN Arachis hypogaea HOM05D004526 ORTHO05D005548 2.1e-21 106.3 129 52.7
CARHR262250 Cardamine hirsuta HOM05D004526 ORTHO05D005548 3.9e-20 102.1 110 49.1
Cfa007708 Carpinus fangiana HOM05D004526 ORTHO05D005548 6.7e-20 101.3 54 88.9
TPR.G73 Trifolium pratense HOM05D004526 ORTHO05D005548 8.7e-20 100.9 74 74.3
MD09G1046100 Malus domestica HOM05D004526 ORTHO05D005548 1.1e-19 100.5 98 57.1
AUR62031643 Chenopodium quinoa HOM05D004526 ORTHO05D005548 5.3e-17 91.7 62 69.4
AUR62038875 Chenopodium quinoa HOM05D004526 ORTHO05D005548 2.6e-16 89.4 59 72.9
MCO09G184 Micromonas commoda HOM05D004526 ORTHO05D005548 3.8e-15 85.5 126 38.9
Actinidia23573 Actinidia chinensis HOM05D004526 ORTHO05D005548 1.9e-14 83.2 67 64.2
PRCOL_00003252 Prasinoderma coloniale HOM05D004526 ORTHO05D005548 7.9e-13 77.8 92 46.7
arahy.Tifrunner.gnm1.ann1.9G88ZW Arachis hypogaea HOM05D004526 ORTHO05D005548 1.8e-12 76.6 48 77.1
C06p02960 Brassica napus HOM05D004526 ORTHO05D005548 1.8e-12 76.6 121 42.1
BolC6t35419H Brassica oleracea HOM05D004526 ORTHO05D005548 1.8e-12 76.6 121 42.1
Sp7g01800 Schrenkiella parvula HOM05D004526 ORTHO05D005548 3.0e-12 75.9 108 40.7
BcaC08g43036 Brassica carinata HOM05D004526 ORTHO05D005548 6.7e-12 74.7 121 42.1
CSS0037061 Camellia sinensis var. sinensis HOM05D004526 ORTHO05D005548 1.5e-11 73.6 48 79.2
SpUn0485_0020 Schrenkiella parvula HOM05D004526 ORTHO05D005548 1.9e-11 73.2 129 38.8
Cre03.g194800 Chlamydomonas reinhardtii HOM05D004526 ORTHO05D005548 9.7e-11 70.9 118 33.9


User provided reference genes

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