Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc13.231 Carica papaya HOM05D005564 ORTHO05D006872 4.6e-166 587.8 292 100.0
Duzib084G1177 Durio zibethinus HOM05D005564 ORTHO05D006872 1.0e-112 410.6 294 70.7
Thecc.03G145600 Theobroma cacao HOM05D005564 ORTHO05D006872 3.2e-111 405.6 293 70.3
Gorai.001G052100 Gossypium raimondii HOM05D005564 ORTHO05D006872 5.7e-108 394.8 295 68.8
Gohir.D07G048900 Gossypium hirsutum HOM05D005564 ORTHO05D006872 1.3e-107 393.7 295 68.8
Manes.06G130000 Manihot esculenta HOM05D005564 ORTHO05D006872 2.8e-107 392.5 296 67.6
Potri.015G111628 Populus trichocarpa HOM05D005564 ORTHO05D006872 2.8e-107 392.5 293 67.6
Cfa013601 Carpinus fangiana HOM05D005564 ORTHO05D006872 3.7e-107 392.1 296 69.9
Gohir.A13G032000 Gossypium hirsutum HOM05D005564 ORTHO05D006872 4.8e-107 391.7 295 67.8
CSS0008072 Camellia sinensis var. sinensis HOM05D005564 ORTHO05D006872 2.6e-105 386.0 294 68.0
Sabra15G0133100 Salix brachista HOM05D005564 ORTHO05D006872 4.5e-105 385.2 294 66.7
Gorai.007G289400 Gossypium raimondii HOM05D005564 ORTHO05D006872 7.7e-105 384.4 294 67.0
Gorai.005G129900 Gossypium raimondii HOM05D005564 ORTHO05D006872 3.8e-104 382.1 296 67.2
FvH4_7g26720 Fragaria vesca HOM05D005564 ORTHO05D006872 6.5e-104 381.3 294 65.6
THA.LOC104825050 Tarenaya hassleriana HOM05D005564 ORTHO05D006872 6.5e-104 381.3 295 66.1
TWI39G1038 Tripterygium wilfordii HOM05D005564 ORTHO05D006872 9.4e-103 377.5 294 67.7
GSVIVG01024470001 Vitis vinifera HOM05D005564 ORTHO05D006872 6.1e-102 374.8 294 65.3
CiPaw.07G183300 Carya illinoinensis HOM05D005564 ORTHO05D006872 8.8e-101 370.9 237 75.9
Aa31LG3G7670 Aethionema arabicum HOM05D005564 ORTHO05D006872 1.1e-100 370.5 298 63.4
Dinv34536 Davidia involucrata HOM05D005564 ORTHO05D006872 1.5e-100 370.2 280 69.6
QL09p027441 Quercus lobata HOM05D005564 ORTHO05D006872 2.6e-100 369.4 293 66.6
Atru.chr6.1979 Acer truncatum HOM05D005564 ORTHO05D006872 3.3e-100 369.0 299 65.6
Atru.chr6.2007 Acer truncatum HOM05D005564 ORTHO05D006872 3.3e-100 369.0 299 65.6
Migut.F00541 Erythranthe guttata HOM05D005564 ORTHO05D006872 1.3e-99 367.1 300 63.7
HanXRQChr08g0221891 Helianthus annuus HOM05D005564 ORTHO05D006872 1.3e-99 367.1 289 67.5
AT5G51170 Arabidopsis thaliana HOM05D005564 ORTHO05D006872 4.8e-99 365.2 294 64.6
COL.COLO4_37310 Corchorus olitorius HOM05D005564 ORTHO05D006872 6.3e-99 364.8 261 70.5
Hma1.2p1_1014F.1_g247960 Hydrangea macrophylla HOM05D005564 ORTHO05D006872 6.3e-99 364.8 296 65.9
Hma1.2p1_1305F.1_g274526 Hydrangea macrophylla HOM05D005564 ORTHO05D006872 6.3e-99 364.8 296 65.9
Lj1g0017373 Lotus japonicus HOM05D005564 ORTHO05D006872 1.4e-98 363.6 292 66.1
Ciclev10032148m.g Citrus clementina HOM05D005564 ORTHO05D006872 1.8e-98 363.2 323 58.5
HanXRQChr08g0223121 Helianthus annuus HOM05D005564 ORTHO05D006872 1.8e-98 363.2 289 67.1
MD07G1241800 Malus domestica HOM05D005564 ORTHO05D006872 1.8e-98 363.2 294 63.9
Glyma.01G079300 Glycine max HOM05D005564 ORTHO05D006872 5.3e-98 361.7 292 65.8
Thhalv10014247m.g Eutrema salsugineum HOM05D005564 ORTHO05D006872 1.2e-97 360.5 300 63.3
Sp6g13380 Schrenkiella parvula HOM05D005564 ORTHO05D006872 1.2e-97 360.5 295 63.4
Lalb_Chr19g0127411 Lupinus albus HOM05D005564 ORTHO05D006872 2.0e-97 359.8 292 64.0
CARHR256880 Cardamine hirsuta HOM05D005564 ORTHO05D006872 2.7e-97 359.4 299 63.5
Prupe.2G270700 Prunus persica HOM05D005564 ORTHO05D006872 2.7e-97 359.4 292 64.0
BraSC35t46004Z Brassica rapa HOM05D005564 ORTHO05D006872 4.5e-97 358.6 296 62.8
TPR.G39148 Trifolium pratense HOM05D005564 ORTHO05D006872 7.7e-97 357.8 305 62.0
TAR629G2772 Trochodendron aralioides HOM05D005564 ORTHO05D006872 7.7e-97 357.8 297 64.3
A10p07960 Brassica napus HOM05D005564 ORTHO05D006872 1.0e-96 357.5 296 62.5
Haze_22223 Corylus avellana HOM05D005564 ORTHO05D006872 1.0e-96 357.5 282 68.4
CANSAT56G0249 Cannabis sativa HOM05D005564 ORTHO05D006872 2.2e-96 356.3 292 64.0
AL8G25430 Arabidopsis lyrata HOM05D005564 ORTHO05D006872 3.8e-96 355.5 299 63.9
C09p39850 Brassica napus HOM05D005564 ORTHO05D006872 5.0e-96 355.1 295 62.0
Phvul.008G143300 Phaseolus vulgaris HOM05D005564 ORTHO05D006872 5.0e-96 355.1 292 63.7
BcaC04g20726 Brassica carinata HOM05D005564 ORTHO05D006872 1.1e-95 354.0 295 61.7
BolC9t56884H Brassica oleracea HOM05D005564 ORTHO05D006872 1.1e-95 354.0 295 61.7
Nitab4.5_0003973g0040 Nicotiana tabacum HOM05D005564 ORTHO05D006872 1.5e-95 353.6 295 62.4
BcaB08g35471 Brassica carinata HOM05D005564 ORTHO05D006872 1.9e-95 353.2 297 62.0
VMungo1383G3643 Vigna mungo HOM05D005564 ORTHO05D006872 3.2e-95 352.4 292 64.7
Medtr0053s0020 Medicago truncatula HOM05D005564 ORTHO05D006872 5.5e-95 351.7 304 60.9
SalBow3G4594 Salvia bowleyana HOM05D005564 ORTHO05D006872 9.4e-95 350.9 289 63.3
CsaV3_5G005020 Cucumis sativus L. HOM05D005564 ORTHO05D006872 1.6e-94 350.1 294 59.2
PSO063G5398 Papaver somniferum HOM05D005564 ORTHO05D006872 3.6e-94 349.0 293 62.1
MD07G1243700 Malus domestica HOM05D005564 ORTHO05D006872 6.1e-94 348.2 294 61.6
Carub.0008s1121 Capsella rubella HOM05D005564 ORTHO05D006872 8.0e-94 347.8 299 61.9
Nn6g33765 Nelumbo nucifera HOM05D005564 ORTHO05D006872 1.0e-93 347.4 290 62.8
arahy.Tifrunner.gnm1.ann1.2T0BFY Arachis hypogaea HOM05D005564 ORTHO05D006872 1.8e-93 346.7 292 63.0
Lj8A49G34 Lonicera japonica HOM05D005564 ORTHO05D006872 2.3e-93 346.3 307 62.2
MSTRG.27230 Avicennia marina HOM05D005564 ORTHO05D006872 5.2e-93 345.1 296 61.5
EL10Ac7g17720 Beta vulgaris HOM05D005564 ORTHO05D006872 2.0e-92 343.2 351 54.1
Phvul.005G030000 Phaseolus vulgaris HOM05D005564 ORTHO05D006872 4.8e-91 338.6 292 62.0
Ah.08g213710 Amaranthus hybridus HOM05D005564 ORTHO05D006872 8.3e-91 337.8 295 59.7
SGA_v2.0_scaffold60G20845 Striga asiatica HOM05D005564 ORTHO05D006872 8.3e-91 337.8 296 59.8
ClCG01G004820 Citrullus lanatus HOM05D005564 ORTHO05D006872 1.1e-90 337.4 299 59.2
CSS0031726 Camellia sinensis var. sinensis HOM05D005564 ORTHO05D006872 1.4e-90 337.0 260 66.5
PGR042G2925 Punica granatum HOM05D005564 ORTHO05D006872 2.4e-90 336.3 296 62.5
Ca_27086_v3 Cicer arietinum L. HOM05D005564 ORTHO05D006872 3.1e-90 335.9 281 63.7
TAR636G1392 Trochodendron aralioides HOM05D005564 ORTHO05D008130 5.4e-90 335.1 283 63.6
FAN06G0976 Fragaria x ananassa HOM05D005564 ORTHO05D006872 2.0e-89 333.2 266 64.3
Gorai.013G121700 Gossypium raimondii HOM05D005564 ORTHO05D006872 2.0e-89 333.2 260 66.9
MD01G1175500 Malus domestica HOM05D005564 ORTHO05D006872 1.0e-88 330.9 323 56.0
Hund18321 Selenicereus undatus HOM05D005564 ORTHO05D006872 1.0e-88 330.9 282 61.7
Oeu030874.1 Olea europaea HOM05D005564 ORTHO05D006872 1.3e-88 330.5 295 59.7
PGSC0003DMG400008328 Solanum tuberosum HOM05D005564 ORTHO05D006872 1.7e-88 330.1 295 59.0
CAN.G309.23 Capsicum annuum HOM05D005564 ORTHO05D006872 2.2e-88 329.7 250 65.6
FAN03G1301 Fragaria x ananassa HOM05D005564 ORTHO05D006872 2.9e-88 329.3 265 63.4
Gohir.A07G044400 Gossypium hirsutum HOM05D005564 ORTHO05D006872 2.9e-88 329.3 260 63.8
ECA233G5472 Erigeron canadensis HOM05D005564 ORTHO05D006872 1.5e-87 327.0 261 65.1
vmacro19959 Vaccinium macrocarpon HOM05D005564 ORTHO05D006872 1.5e-87 327.0 293 60.8
Sopen03g024760 Solanum pennellii HOM05D005564 ORTHO05D006872 5.5e-87 325.1 295 58.0
Solyc03g093880.3 Solanum lycopersicum HOM05D005564 ORTHO05D006872 7.2e-87 324.7 295 58.3
Sed0010204 Sechium edule HOM05D005564 ORTHO05D006872 2.1e-86 323.2 239 65.3
DCAR_020165 Daucus carota HOM05D005564 ORTHO05D006872 2.7e-86 322.8 291 60.8
PSO782G4004 Papaver somniferum HOM05D005564 ORTHO05D006872 2.7e-86 322.8 293 59.0
Eucgr.A02932 Eucalyptus grandis HOM05D005564 ORTHO05D006872 2.3e-85 319.7 299 57.2
Cc00_g13030 Coffea canephora HOM05D005564 ORTHO05D006872 3.0e-85 319.3 296 57.8
ClCG09G010750 Citrullus lanatus HOM05D005564 ORTHO05D006872 4.0e-85 318.9 285 57.2
Peaxi162Scf00073g01727 Petunia axillaris HOM05D005564 ORTHO05D006872 4.0e-85 318.9 295 58.0
VMungo1080G0069 Vigna mungo HOM05D005564 ORTHO05D006872 2.0e-84 316.6 333 54.1
RcHm_v2.0_Chr1g0373311 Rosa chinensis HOM05D005564 ORTHO05D006872 1.4e-82 310.5 226 68.6
PSO017G2767 Papaver somniferum HOM05D005564 ORTHO05D006872 1.8e-82 310.1 230 63.9
CDE02G1506 Ceratophyllum demersum HOM05D005564 ORTHO05D006872 7.0e-82 308.1 290 55.5
AUR62008825 Chenopodium quinoa HOM05D005564 ORTHO05D006872 4.5e-81 305.4 210 68.6
MD07G1244900 Malus domestica HOM05D005564 ORTHO05D006872 1.3e-80 303.9 209 69.9
AUR62025416 Chenopodium quinoa HOM05D005564 ORTHO05D006872 2.5e-79 299.7 215 66.0
FAN10G0633 Fragaria x ananassa HOM05D005564 ORTHO05D006872 4.3e-79 298.9 227 67.0
MELO3C005454.2 Cucumis melo HOM05D005564 ORTHO05D006872 3.6e-78 295.8 228 63.6
SHI14145 Sapria himalayana HOM05D005564 ORTHO05D000001 2.3e-77 293.1 279 56.6
FAN01G2799 Fragaria x ananassa HOM05D005564 ORTHO05D006872 6.4e-75 285.0 300 52.0
Zm00001eb249040 Zea mays HOM05D005564 ORTHO05D006872 6.6e-72 275.0 292 49.7
ATR0188G007 Amborella trichopoda HOM05D005564 ORTHO05D006872 1.2e-70 270.8 287 52.6
unitig_21.g20780 Utricularia gibba HOM05D005564 ORTHO05D006872 4.0e-69 265.8 265 55.5
Rhsim03G0157100 Rhododendron simsii HOM05D005564 ORTHO05D006872 4.4e-68 262.3 250 58.0
Gorai.006G046400 Gossypium raimondii HOM05D005564 ORTHO05D006872 1.1e-63 247.7 227 60.4
Medtr0092s0090 Medicago truncatula HOM05D005564 ORTHO05D006872 6.2e-62 241.9 215 60.0
SEGI_35477 Sequoiadendron giganteum HOM05D005564 ORTHO05D006872 8.9e-61 238.0 282 48.9
Nn6g32633 Nelumbo nucifera HOM05D005564 ORTHO05D006872 2.0e-60 236.9 204 60.8
Nitab4.5_0000103g0380 Nicotiana tabacum HOM05D005564 ORTHO05D006872 3.7e-59 232.6 162 66.7
Sc19g0002740 Simmondsia chinensis HOM05D005564 ORTHO05D006872 5.4e-58 228.8 204 58.3
Os02g0651000 Oryza sativa ssp. japonica HOM05D005564 ORTHO05D006872 1.9e-55 220.3 192 56.8
MD07G1243300 Malus domestica HOM05D005564 ORTHO05D006872 1.2e-54 217.6 237 53.6
MD07G1245400 Malus domestica HOM05D005564 ORTHO05D006872 3.1e-53 213.0 152 69.7
AagrBONN_evm.TU.Sc2ySwM_228.2399 Anthoceros agrestis HOM05D005564 ORTHO05D006872 2.6e-52 209.9 263 44.9
Hma1.2p1_1014F.1_g247920 Hydrangea macrophylla HOM05D005564 ORTHO05D006872 3.4e-52 209.5 182 61.5
SMO145G0164 Selaginella moellendorffii HOM05D005564 ORTHO05D006872 1.9e-50 203.8 302 39.4
arahy.Tifrunner.gnm1.ann1.R6MN5Z Arachis hypogaea HOM05D005564 ORTHO05D006872 3.2e-50 203.0 281 46.3
CANSAT78G0945 Cannabis sativa HOM05D005564 ORTHO05D006872 3.2e-50 203.0 221 51.1
Dinv34539 Davidia involucrata HOM05D005564 ORTHO05D006872 3.5e-49 199.5 274 48.9
Gohir.D02G135666 Gossypium hirsutum HOM05D005564 ORTHO05D006872 2.1e-46 190.3 109 78.9
CDE11G0070 Ceratophyllum demersum HOM05D005564 ORTHO05D006872 6.4e-43 178.7 204 51.0
Pp3c13_1340 Physcomitrium patens HOM05D005564 ORTHO05D006872 1.4e-42 177.6 237 44.3
Aqoxy3G02663 Aquilegia oxysepala HOM05D005564 ORTHO05D006872 5.4e-42 175.6 134 66.4
Rhsim03G0158000 Rhododendron simsii HOM05D005564 ORTHO05D006872 1.2e-41 174.5 294 40.5
CAN.G1016.1 Capsicum annuum HOM05D005564 ORTHO05D006872 1.1e-39 167.9 130 63.8
Prupe.4G133000 Prunus persica HOM05D005564 ORTHO05D006872 1.1e-37 161.4 173 51.4
Gohir.D02G130966 Gossypium hirsutum HOM05D005564 ORTHO05D006872 1.5e-36 157.5 138 58.7
Lsat_1_v5_gn_8_13861 Lactuca sativa HOM05D000071 ORTHO05D006872 7.9e-33 145.2 117 62.4
Psat3g166160 Pisum sativum HOM05D005564 ORTHO05D006872 3.9e-32 142.9 218 39.4
Psat3g164240 Pisum sativum HOM05D005564 ORTHO05D006872 1.8e-29 134.0 200 41.0
CBR_g31024 Chara braunii HOM05D005564 ORTHO05D006872 4.0e-29 132.9 231 35.5
Nn6g32636 Nelumbo nucifera HOM05D005564 ORTHO05D006872 5.1e-24 115.9 87 66.7
Mapoly0036s0004 Marchantia polymorpha HOM05D005564 ORTHO05D006872 1.1e-21 108.2 179 41.9
MCO11G677 Micromonas commoda HOM05D005564 ORTHO05D006872 1.8e-16 90.9 219 30.1
Cre01.g041900 Chlamydomonas reinhardtii HOM05D005564 ORTHO05D006872 1.4e-13 81.3 211 29.9
Aqoxy3G02664 Aquilegia oxysepala HOM05D000665 ORTHO05D000140 1.9e-07 60.8 87 47.1


User provided reference genes

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