Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c44154 Carica papaya HOM05D005545 ORTHO05D006917 5.3e-195 684.1 327 100.0
Thecc.10G162000 Theobroma cacao HOM05D005545 ORTHO05D006917 3.2e-160 568.5 328 80.8
Gohir.A05G400900 Gossypium hirsutum HOM05D005545 ORTHO05D006917 2.3e-158 562.4 328 80.8
COL.COLO4_21694 Corchorus olitorius HOM05D005545 ORTHO05D006917 7.4e-157 557.4 328 79.3
Gorai.012G017400 Gossypium raimondii HOM05D005545 ORTHO05D006917 7.4e-157 557.4 328 80.5
Duzib114G0439 Durio zibethinus HOM05D005545 ORTHO05D006917 3.7e-156 555.1 328 79.9
Dinv32030 Davidia involucrata HOM05D005545 ORTHO05D006917 1.4e-155 553.1 329 80.2
Ciclev10004162m.g Citrus clementina HOM05D005545 ORTHO05D006917 2.6e-154 548.9 329 79.0
Atru.chr12.1348 Acer truncatum HOM05D005545 ORTHO05D006917 3.5e-154 548.5 328 80.2
Actinidia10163 Actinidia chinensis HOM05D005545 ORTHO05D006917 7.7e-154 547.4 329 79.3
Prupe.2G034500 Prunus persica HOM05D005545 ORTHO05D006917 3.8e-153 545.0 328 78.7
GSVIVG01013494001 Vitis vinifera HOM05D005545 ORTHO05D006917 3.8e-153 545.0 328 78.7
FvH4_7g02950 Fragaria vesca HOM05D005545 ORTHO05D006917 3.2e-152 542.0 328 77.7
Gohir.D04G014900 Gossypium hirsutum HOM05D005545 ORTHO05D006917 2.1e-151 539.3 328 78.7
TWI63G0062 Tripterygium wilfordii HOM05D005545 ORTHO05D006917 6.1e-151 537.7 327 78.6
CSS0017863 Camellia sinensis var. sinensis HOM05D005545 ORTHO05D006917 3.9e-150 535.0 328 78.4
CSS0046105 Camellia sinensis var. sinensis HOM05D005545 ORTHO05D006917 3.9e-150 535.0 328 78.4
Manes.04G160000 Manihot esculenta HOM05D005545 ORTHO05D006917 8.8e-150 533.9 327 78.0
MD07G1038300 Malus domestica HOM05D005545 ORTHO05D006917 1.5e-149 533.1 327 76.8
FAN03G2070 Fragaria x ananassa HOM05D005545 ORTHO05D006917 2.0e-149 532.7 338 75.4
MD02G1288500 Malus domestica HOM05D005545 ORTHO05D006917 9.7e-149 530.4 327 75.8
TAR636G1823 Trochodendron aralioides HOM05D005545 ORTHO05D006917 3.7e-148 528.5 329 76.9
HanXRQChr11g0341811 Helianthus annuus HOM05D005545 ORTHO05D006917 9.1e-147 523.9 328 75.9
FAN06G4324 Fragaria x ananassa HOM05D005545 ORTHO05D006917 3.5e-146 521.9 345 73.6
Oeu040901.1 Olea europaea HOM05D005545 ORTHO05D006917 7.7e-146 520.8 332 74.4
CiPaw.13G013000 Carya illinoinensis HOM05D005545 ORTHO05D006917 1.5e-144 516.5 327 74.3
Nn2g14866 Nelumbo nucifera HOM05D005545 ORTHO05D006917 1.9e-144 516.2 329 75.1
Sed0011144 Sechium edule HOM05D005545 ORTHO05D006917 7.2e-144 514.2 327 74.9
Lj9A655T39 Lonicera japonica HOM05D005545 ORTHO05D006917 9.4e-144 513.8 329 76.0
Cfa010879 Carpinus fangiana HOM05D005545 ORTHO05D006917 2.1e-143 512.7 327 74.3
Aqoxy2G00348 Aquilegia oxysepala HOM05D005545 ORTHO05D006917 3.6e-143 511.9 329 73.6
QL04p014793 Quercus lobata HOM05D005545 ORTHO05D006917 6.1e-143 511.1 328 73.8
QL04p018188 Quercus lobata HOM05D005545 ORTHO05D006917 6.1e-143 511.1 328 73.8
CANSAT56G1029 Cannabis sativa HOM05D005545 ORTHO05D006917 3.0e-142 508.8 328 74.4
Lsat_1_v5_gn_1_115460 Lactuca sativa HOM05D005545 ORTHO05D006917 3.0e-142 508.8 327 74.9
Nn7g36650 Nelumbo nucifera HOM05D005545 ORTHO05D006917 8.8e-142 507.3 328 74.1
ECA248G0597 Erigeron canadensis HOM05D005545 ORTHO05D006917 1.2e-141 506.9 329 73.9
vmacro13750 Vaccinium macrocarpon HOM05D005545 ORTHO05D006917 2.0e-141 506.1 358 68.4
Peaxi162Scf00025g01520 Petunia axillaris HOM05D005545 ORTHO05D006917 4.4e-141 505.0 332 72.6
CAN.G1074.9 Capsicum annuum HOM05D005545 ORTHO05D006917 5.7e-141 504.6 329 73.6
CsaV3_5G036710 Cucumis sativus L. HOM05D005545 ORTHO05D006917 9.7e-141 503.8 328 72.9
Solyc11g005250.3 Solanum lycopersicum HOM05D005545 ORTHO05D006917 1.3e-140 503.4 330 73.6
Migut.B01225 Erythranthe guttata HOM05D005545 ORTHO05D006917 2.8e-140 502.3 333 71.8
MSTRG.20517 Avicennia marina HOM05D005545 ORTHO05D006917 4.8e-140 501.5 327 72.2
ClCG05G026770 Citrullus lanatus HOM05D005545 ORTHO05D006917 4.8e-140 501.5 327 73.4
arahy.Tifrunner.gnm1.ann1.598UNF Arachis hypogaea HOM05D005545 ORTHO05D006917 8.3e-140 500.7 327 71.6
MELO3C012467.2 Cucumis melo HOM05D005545 ORTHO05D006917 8.3e-140 500.7 328 73.8
arahy.Tifrunner.gnm1.ann1.HR7PRR Arachis hypogaea HOM05D005545 ORTHO05D006917 1.4e-139 500.0 327 71.6
Lj3g0017403 Lotus japonicus HOM05D005545 ORTHO05D006917 1.4e-139 500.0 328 72.0
Sopen11g001260 Solanum pennellii HOM05D005545 ORTHO05D006917 1.4e-139 500.0 330 73.3
Potri.T125006 Populus trichocarpa HOM05D005545 ORTHO05D006917 1.8e-139 499.6 327 74.0
Lalb_Chr04g0264091 Lupinus albus HOM05D005545 ORTHO05D006917 4.1e-139 498.4 329 72.3
Potri.003G197701 Populus trichocarpa HOM05D005545 ORTHO05D006917 4.1e-139 498.4 327 73.7
VMungo1080G1426 Vigna mungo HOM05D005545 ORTHO05D006917 1.6e-138 496.5 327 73.1
AL5G35510 Arabidopsis lyrata HOM05D005545 ORTHO05D006917 5.0e-137 491.5 327 72.8
Thhalv10010067m.g Eutrema salsugineum HOM05D005545 ORTHO05D006917 1.5e-136 490.0 328 72.6
CDE12G0276 Ceratophyllum demersum HOM05D005545 ORTHO05D006917 5.5e-136 488.0 331 70.1
Psat5g217720 Pisum sativum HOM05D005545 ORTHO05D006917 5.5e-136 488.0 327 69.4
SGA_v2.0_scaffold319G48544 Striga asiatica HOM05D005545 ORTHO05D006917 7.2e-136 487.6 329 70.2
PSO384G2575 Papaver somniferum HOM05D005545 ORTHO05D006917 1.2e-135 486.9 327 70.0
Glyma.11G154800 Glycine max HOM05D005545 ORTHO05D006917 2.7e-135 485.7 328 71.0
Hma1.2p1_2114F.1_g314270 Hydrangea macrophylla HOM05D005545 ORTHO05D006917 2.7e-135 485.7 309 75.1
Ca_19084_v3 Cicer arietinum L. HOM05D005545 ORTHO05D006917 6.1e-135 484.6 327 69.1
Phvul.005G027400 Phaseolus vulgaris HOM05D005545 ORTHO05D006917 8.0e-135 484.2 327 72.2
AT3G54460 Arabidopsis thaliana HOM05D005545 ORTHO05D006917 1.0e-134 483.8 327 72.2
TPR.G17827 Trifolium pratense HOM05D005545 ORTHO05D006917 1.4e-134 483.4 327 69.7
Eucgr.J01185 Eucalyptus grandis HOM05D005545 ORTHO05D006917 8.8e-134 480.7 328 70.4
SalBow5G5421 Salvia bowleyana HOM05D005545 ORTHO05D006917 2.0e-133 479.6 327 69.7
EL10Ac2g02815 Beta vulgaris HOM05D005545 ORTHO05D006917 3.4e-133 478.8 328 70.1
SGA_v2.0_scaffold124G33619 Striga asiatica HOM05D005545 ORTHO05D006917 3.4e-133 478.8 328 70.1
PGR044G1070 Punica granatum HOM05D005545 ORTHO05D006917 7.5e-133 477.6 328 72.6
Glyma.04G138300 Glycine max HOM05D005545 ORTHO05D006917 9.8e-133 477.2 327 70.3
Ah.12g062880 Amaranthus hybridus HOM05D005545 ORTHO05D006917 1.7e-132 476.5 328 68.9
Haze_03077 Corylus avellana HOM05D005545 ORTHO05D006917 2.8e-132 475.7 327 70.6
Aa31sc35G110 Aethionema arabicum HOM05D005545 ORTHO05D006917 1.1e-131 473.8 327 71.6
BcaB02g08489 Brassica carinata HOM05D005545 ORTHO05D006917 1.4e-131 473.4 327 71.6
Sc10g0004410 Simmondsia chinensis HOM05D005545 ORTHO05D006917 2.4e-131 472.6 315 72.4
Carub.0005s2108 Capsella rubella HOM05D005545 ORTHO05D006917 4.1e-131 471.9 328 70.4
HPP92_001017 Vanilla planifolia HOM05D005545 ORTHO05D006917 9.1e-131 470.7 326 69.9
A04p05370 Brassica napus HOM05D005545 ORTHO05D006917 1.6e-130 469.9 327 71.3
THA.LOC104824192 Tarenaya hassleriana HOM05D005545 ORTHO05D006917 1.6e-130 469.9 327 69.7
BolC4t25380H Brassica oleracea HOM05D005545 ORTHO05D006917 1.3e-129 466.8 327 70.9
DCAR_003247 Daucus carota HOM05D005545 ORTHO05D006917 2.3e-129 466.1 327 68.2
BcaC02g09068 Brassica carinata HOM05D005545 ORTHO05D006917 3.8e-129 465.3 327 70.6
C04p38060 Brassica napus HOM05D005545 ORTHO05D006917 3.8e-129 465.3 327 70.6
Os01g0952200 Oryza sativa ssp. japonica HOM05D005545 ORTHO05D006917 3.8e-129 465.3 327 67.9
BraA04t16237Z Brassica rapa HOM05D005545 ORTHO05D006917 5.0e-129 464.9 327 70.0
CARHR164360 Cardamine hirsuta HOM05D005545 ORTHO05D006917 1.6e-127 459.9 327 68.5
Cc00_g05310 Coffea canephora HOM05D005545 ORTHO05D006917 1.6e-127 459.9 327 68.2
Hund15735 Selenicereus undatus HOM05D005545 ORTHO05D006917 6.1e-127 458.0 332 67.5
AUR62026877 Chenopodium quinoa HOM05D005545 ORTHO05D006917 2.3e-126 456.1 336 67.0
AUR62037185 Chenopodium quinoa HOM05D005545 ORTHO05D006917 4.4e-125 451.8 336 66.4
unitig_749.g13482 Utricularia gibba HOM05D005545 ORTHO05D006917 1.7e-124 449.9 327 66.1
Sp5g07960 Schrenkiella parvula HOM05D005545 ORTHO05D006917 5.4e-123 444.9 328 68.9
Pp3c16_14340 Physcomitrium patens HOM05D005545 ORTHO05D006917 1.6e-111 406.8 327 61.8
SMO351G0460 Selaginella moellendorffii HOM05D005545 ORTHO05D006917 8.0e-111 404.4 327 60.6
Nitab4.5_0003414g0020 Nicotiana tabacum HOM05D005545 ORTHO05D006917 2.3e-110 402.9 269 69.1
Rhsim07G0066900 Rhododendron simsii HOM05D005545 ORTHO05D006917 5.8e-109 398.3 326 62.6
Sabra03G0147100 Salix brachista HOM05D005545 ORTHO05D006917 7.8e-106 387.9 212 83.0
CBR_g54197 Chara braunii HOM05D005545 ORTHO05D006917 5.4e-99 365.2 330 56.4
ATR0745G085 Amborella trichopoda HOM05D005545 ORTHO05D006917 3.6e-95 352.4 204 79.4
Mapoly0059s0106 Marchantia polymorpha HOM05D005545 ORTHO05D006917 2.6e-93 346.3 327 55.4
AagrBONN_evm.TU.Sc2ySwM_368.3444 Anthoceros agrestis HOM05D005545 ORTHO05D006917 1.1e-91 340.9 265 61.5
AagrBONN_evm.TU.Sc2ySwM_117.768 Anthoceros agrestis HOM05D005545 ORTHO05D006917 3.2e-91 339.3 265 61.5
Nitab4.5_0000320g0210 Nicotiana tabacum HOM05D005545 ORTHO05D006917 1.5e-88 330.5 235 65.1
SMO338G0037 Selaginella moellendorffii HOM05D005545 ORTHO05D006917 1.4e-86 323.9 268 59.0
Peaxi162Scf00025g01521 Petunia axillaris HOM05D005545 ORTHO05D006917 1.2e-82 310.8 208 71.2
RcHm_v2.0_Chr1g0323901 Rosa chinensis HOM05D005545 ORTHO05D006917 5.5e-67 258.8 141 85.8
SMO140G0092 Selaginella moellendorffii HOM05D005545 ORTHO05D006917 3.0e-65 253.1 261 52.5
Actinidia06242 Actinidia chinensis HOM05D005545 ORTHO05D006917 3.3e-56 223.0 161 64.6
arahy.Tifrunner.gnm1.ann1.3MZP5F Arachis hypogaea HOM05D005545 ORTHO05D006917 2.6e-53 213.4 136 75.0
FAN01G2386 Fragaria x ananassa HOM05D005545 ORTHO05D006917 5.0e-52 209.1 163 66.9
MCO04G441 Micromonas commoda HOM05D005545 ORTHO05D006917 1.2e-37 161.4 349 33.5
PRCOL_00000400 Prasinoderma coloniale HOM05D005545 ORTHO05D006917 1.2e-37 161.4 320 33.4
ATR0745G092 Amborella trichopoda HOM05D005545 ORTHO05D006917 4.7e-26 122.9 115 55.7
Actinidia06243 Actinidia chinensis HOM05D005545 ORTHO05D006917 8.9e-09 65.5 33 90.9


User provided reference genes

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