Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG09G002600 Citrullus lanatus HOM05D001432 ORTHO05D150367 5.5e-101 370.9 182 100.0
MELO3C023394.2 Cucumis melo HOM05D001432 ORTHO05D009001 6.6e-22 108.2 72 76.4
ClCG09G002630 Citrullus lanatus HOM05D001432 ORTHO05D009001 1.5e-21 107.1 72 75.0
CsaV3_7G032700 Cucumis sativus L. HOM05D001432 ORTHO05D009001 2.8e-20 102.8 72 73.6
Ca_07177_v3 Cicer arietinum L. HOM05D001432 ORTHO05D009001 3.6e-20 102.4 72 69.4
Cfa002016 Carpinus fangiana HOM05D001432 ORTHO05D009001 4.8e-20 102.1 92 62.0
Ciclev10025319m.g Citrus clementina HOM05D001432 ORTHO05D009001 1.1e-19 100.9 72 69.4
Nitab4.5_0006854g0010 Nicotiana tabacum HOM05D001432 ORTHO05D009001 1.1e-19 100.9 72 72.2
Sed0021672 Sechium edule HOM05D001432 ORTHO05D009001 3.1e-19 99.4 72 69.4
TWI12G0405 Tripterygium wilfordii HOM05D001432 ORTHO05D009001 4.0e-19 99.0 103 55.3
Haze_16505 Corylus avellana HOM05D001432 ORTHO05D009001 6.9e-19 98.2 72 70.8
HanXRQChr09g0274821 Helianthus annuus HOM05D001432 ORTHO05D009001 6.9e-19 98.2 108 50.9
HanXRQChr09g0274891 Helianthus annuus HOM05D001432 ORTHO05D009001 6.9e-19 98.2 108 50.9
QL05p034025 Quercus lobata HOM05D001432 ORTHO05D009001 6.9e-19 98.2 72 69.4
RcHm_v2.0_Chr2g0136821 Rosa chinensis HOM05D001432 ORTHO05D009001 6.9e-19 98.2 72 69.4
Cc04_g03940 Coffea canephora HOM05D001432 ORTHO05D009001 9.0e-19 97.8 92 58.7
Prupe.3G078500 Prunus persica HOM05D001432 ORTHO05D009001 9.0e-19 97.8 108 52.8
Thecc.06G074500 Theobroma cacao HOM05D001432 ORTHO05D009001 9.0e-19 97.8 92 58.7
SalBow2G3379 Salvia bowleyana HOM05D001432 ORTHO05D009001 1.2e-18 97.4 108 51.9
Atru.chr1.3144 Acer truncatum HOM05D001432 ORTHO05D009001 1.5e-18 97.1 72 69.4
Duzib235G0345 Durio zibethinus HOM05D001432 ORTHO05D009001 2.0e-18 96.7 72 68.1
arahy.Tifrunner.gnm1.ann1.NTT2QB Arachis hypogaea HOM05D001432 ORTHO05D009001 2.6e-18 96.3 73 69.9
FvH4_6g30470 Fragaria vesca HOM05D001432 ORTHO05D009001 2.6e-18 96.3 72 69.4
FAN14G3546 Fragaria x ananassa HOM05D001432 ORTHO05D009001 2.6e-18 96.3 72 69.4
Psat7g254920 Pisum sativum HOM05D001432 ORTHO05D009001 2.6e-18 96.3 72 68.1
Lj3g0019131 Lotus japonicus HOM05D001432 ORTHO05D009001 3.4e-18 95.9 72 69.4
Phvul.010G153200 Phaseolus vulgaris HOM05D001432 ORTHO05D009001 3.4e-18 95.9 72 68.1
Manes.04G117500 Manihot esculenta HOM05D001432 ORTHO05D009001 5.8e-18 95.1 72 66.7
Medtr4g011370 Medicago truncatula HOM05D001432 ORTHO05D009001 5.8e-18 95.1 72 65.3
Hund00555 Selenicereus undatus HOM05D001432 ORTHO05D009001 7.6e-18 94.7 108 47.2
VMungo0331G1721 Vigna mungo HOM05D001432 ORTHO05D009001 7.6e-18 94.7 74 68.9
COL.COLO4_12882 Corchorus olitorius HOM05D001432 ORTHO05D009001 9.9e-18 94.4 72 66.7
CSS0039762 Camellia sinensis var. sinensis HOM05D001432 ORTHO05D009001 1.3e-17 94.0 72 65.3
PGSC0003DMG400028620 Solanum tuberosum HOM05D001432 ORTHO05D009001 1.3e-17 94.0 72 66.7
CANSAT56G2537 Cannabis sativa HOM05D001432 ORTHO05D009001 2.2e-17 93.2 108 50.9
FAN05G1517 Fragaria x ananassa HOM05D001432 ORTHO05D009001 2.2e-17 93.2 72 68.1
unitig_62.g23602 Utricularia gibba HOM05D001315 ORTHO05D001618 2.2e-17 93.2 72 66.7
AUR62011574 Chenopodium quinoa HOM05D001432 ORTHO05D009001 3.8e-17 92.4 72 62.5
Potri.003G060000 Populus trichocarpa HOM05D001432 ORTHO05D009001 3.8e-17 92.4 108 49.1
BcaC09g48531 Brassica carinata HOM05D001432 ORTHO05D009001 4.9e-17 92.0 72 63.9
Rhsim12G0193900 Rhododendron simsii HOM05D001432 ORTHO05D009001 6.4e-17 91.7 72 62.5
SGA_v2.0_scaffold5G02656 Striga asiatica HOM05D001432 ORTHO05D009001 6.4e-17 91.7 108 49.1
vmacro16924 Vaccinium macrocarpon HOM05D001432 ORTHO05D009001 6.4e-17 91.7 72 62.5
C01p48790 Brassica napus HOM05D001432 ORTHO05D009001 8.4e-17 91.3 72 63.9
BolC1t04834H Brassica oleracea HOM05D001432 ORTHO05D009001 8.4e-17 91.3 72 63.9
Cpa.g.sc10.218 Carica papaya HOM05D001432 ORTHO05D009001 8.4e-17 91.3 72 62.5
Sopen12g022090 Solanum pennellii HOM05D001432 ORTHO05D009001 8.4e-17 91.3 72 63.9
GSVIVG01017239001 Vitis vinifera HOM05D001432 ORTHO05D009001 8.4e-17 91.3 72 63.9
A01p38460 Brassica napus HOM05D001432 ORTHO05D009001 1.1e-16 90.9 72 62.5
CAN.G303.78 Capsicum annuum HOM05D001432 ORTHO05D009001 1.1e-16 90.9 71 64.8
Dinv30562 Davidia involucrata HOM05D001432 ORTHO05D009001 1.1e-16 90.9 72 62.5
Lsat_1_v5_gn_4_104581 Lactuca sativa HOM05D001432 ORTHO05D009001 1.4e-16 90.5 72 62.5
Oeu015234.1 Olea europaea HOM05D001432 ORTHO05D009001 1.4e-16 90.5 72 63.9
Solyc12g042910.2 Solanum lycopersicum HOM05D001432 ORTHO05D009001 1.9e-16 90.1 72 62.5
arahy.Tifrunner.gnm1.ann1.P8UK8X Arachis hypogaea HOM05D001432 ORTHO05D009001 2.4e-16 89.7 89 57.3
BraA01t03896Z Brassica rapa HOM05D001432 ORTHO05D009001 2.4e-16 89.7 72 61.1
Gohir.D06G123500 Gossypium hirsutum HOM05D001432 ORTHO05D009001 2.4e-16 89.7 72 63.9
CiPaw.02G154200 Carya illinoinensis HOM05D001432 ORTHO05D009001 3.2e-16 89.4 72 66.7
Migut.I00806 Erythranthe guttata HOM05D001432 ORTHO05D009001 3.2e-16 89.4 108 49.1
Gohir.A06G119300 Gossypium hirsutum HOM05D001432 ORTHO05D009001 3.2e-16 89.4 72 63.9
Carub.0003s1537 Capsella rubella HOM05D001432 ORTHO05D009001 4.2e-16 89.0 72 62.5
MD17G1203600 Malus domestica HOM05D001432 ORTHO05D009001 4.2e-16 89.0 72 65.3
Sp3g13920 Schrenkiella parvula HOM05D001432 ORTHO05D009001 4.2e-16 89.0 72 62.5
TAR383G0401 Trochodendron aralioides HOM05D001432 ORTHO05D009001 4.2e-16 89.0 72 63.9
ECA232G2422 Erigeron canadensis HOM05D001432 ORTHO05D009001 5.4e-16 88.6 72 59.7
EL10Ac9g21949 Beta vulgaris HOM05D001432 ORTHO05D009001 7.1e-16 88.2 108 42.6
Thhalv10020425m.g Eutrema salsugineum HOM05D001432 ORTHO05D009001 7.1e-16 88.2 72 61.1
PGR031G1163 Punica granatum HOM05D001432 ORTHO05D009001 7.1e-16 88.2 91 56.0
AL3G28260 Arabidopsis lyrata HOM05D001432 ORTHO05D009001 9.3e-16 87.8 72 62.5
Actinidia16000 Actinidia chinensis HOM05D001262 ORTHO05D009001 1.2e-15 87.4 72 61.1
AT3G15620 Arabidopsis thaliana HOM05D001432 ORTHO05D009001 1.2e-15 87.4 72 61.1
AUR62016390 Chenopodium quinoa HOM05D001432 ORTHO05D009001 1.2e-15 87.4 72 56.9
Sabra03G0034400 Salix brachista HOM05D001432 ORTHO05D009001 1.2e-15 87.4 72 62.5
THA.LOC104818045 Tarenaya hassleriana HOM05D001432 ORTHO05D009001 1.2e-15 87.4 103 49.5
Glyma.08G209600 Glycine max HOM05D001432 ORTHO05D009001 1.6e-15 87.0 72 63.9
Gorai.010G143600 Gossypium raimondii HOM05D001432 ORTHO05D009001 1.6e-15 87.0 69 63.8
Peaxi162Scf00034g01311 Petunia axillaris HOM05D001432 ORTHO05D009001 1.6e-15 87.0 72 66.7
Ah.01g020870 Amaranthus hybridus HOM05D001432 ORTHO05D009001 2.1e-15 86.7 72 58.3
Aqoxy7G02054 Aquilegia oxysepala HOM05D001432 ORTHO05D009001 2.7e-15 86.3 72 61.1
Nn8g39367 Nelumbo nucifera HOM05D001432 ORTHO05D009001 2.7e-15 86.3 72 62.5
Eucgr.J03037 Eucalyptus grandis HOM05D001432 ORTHO05D009001 6.0e-15 85.1 72 62.5
Aa31LG8G2830 Aethionema arabicum HOM05D001432 ORTHO05D009001 7.9e-15 84.7 72 61.1
CDE04G0156 Ceratophyllum demersum HOM05D001432 ORTHO05D009001 1.8e-14 83.6 83 54.2
MBI01_g07130_MAGBIO Magnolia biondii HOM05D001432 ORTHO05D009001 1.8e-14 83.6 108 45.4
BcaB04g20913 Brassica carinata HOM05D001432 ORTHO05D009001 2.3e-14 83.2 72 59.7
HPP92_008657 Vanilla planifolia HOM05D001432 ORTHO05D009001 8.7e-14 81.3 72 55.6
AagrBONN_evm.TU.Sc2ySwM_362.2051 Anthoceros agrestis HOM05D001432 ORTHO05D009001 4.8e-12 75.5 76 52.6
Sc10g0005650 Simmondsia chinensis HOM05D001432 ORTHO05D009001 1.1e-11 74.3 72 54.2
Pp3c22_7890 Physcomitrium patens HOM05D001432 ORTHO05D009001 2.4e-11 73.2 183 35.0
Mapoly0095s0027 Marchantia polymorpha HOM05D001432 ORTHO05D009001 4.0e-11 72.4 72 52.8
Mapoly0049s0130 Marchantia polymorpha HOM05D001432 ORTHO05D009001 2.0e-10 70.1 72 51.4
Mapoly0163s0002 Marchantia polymorpha HOM05D001432 ORTHO05D009001 2.0e-10 70.1 72 51.4
CBR_g30581 Chara braunii HOM05D000019 ORTHO05D000048 5.8e-10 68.6 75 49.3
TPR.G38677 Trifolium pratense HOM05D001432 ORTHO05D009001 1.3e-09 67.4 48 60.4
ATR0815G018 Amborella trichopoda HOM05D001432 ORTHO05D009001 2.2e-09 66.6 76 46.1
PSO170G4564 Papaver somniferum HOM05D001432 ORTHO05D009001 2.2e-09 66.6 72 47.2
SMO169G0266 Selaginella moellendorffii HOM05D001432 ORTHO05D009001 2.9e-09 66.2 130 34.6
SEGI_39830 Sequoiadendron giganteum HOM05D001432 ORTHO05D009001 2.9e-09 66.2 72 48.6
Nitab4.5_0003011g0090 Nicotiana tabacum HOM05D001432 ORTHO05D009001 4.9e-09 65.5 117 38.5
Rhsim12G0194000 Rhododendron simsii HOM05D000061 ORTHO05D009001 4.9e-09 65.5 58 62.1
Zm00001eb235370 Zea mays HOM05D001432 ORTHO05D009001 3.2e-08 62.8 102 40.2
PSO455G0239 Papaver somniferum HOM05D001432 ORTHO05D009001 4.2e-08 62.4 72 45.8
MCO04G063 Micromonas commoda HOM05D001432 ORTHO05D009001 7.1e-08 61.6 118 35.6
Os02g0204400 Oryza sativa ssp. japonica HOM05D001432 ORTHO05D009001 9.3e-08 61.2 112 37.5


User provided reference genes

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