Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG06G016990 Citrullus lanatus HOM05D004647 ORTHO05D005349 6.6e-134 480.7 244 100.0
Sed0013198 Sechium edule HOM05D004647 ORTHO05D005349 1.6e-124 449.5 244 92.2
Glyma.02G112000 Glycine max HOM05D004647 ORTHO05D005349 2.4e-107 392.5 239 81.2
Sabra12G0057400 Salix brachista HOM05D004647 ORTHO05D005349 5.3e-107 391.3 238 80.7
Potri.012G080300 Populus trichocarpa HOM05D004647 ORTHO05D005349 6.9e-107 391.0 240 79.6
arahy.Tifrunner.gnm1.ann1.HI7WIW Arachis hypogaea HOM05D004647 ORTHO05D005349 4.5e-106 388.3 240 80.4
Prupe.5G174300 Prunus persica HOM05D004647 ORTHO05D005349 4.5e-106 388.3 244 77.9
TPR.G14966 Trifolium pratense HOM05D004647 ORTHO05D005349 4.5e-106 388.3 240 79.6
Psat2g127400 Pisum sativum HOM05D004647 ORTHO05D005349 7.6e-106 387.5 236 81.4
arahy.Tifrunner.gnm1.ann1.T8C5SJ Arachis hypogaea HOM05D004647 ORTHO05D005349 9.9e-106 387.1 240 80.4
CiPaw.11G026900 Carya illinoinensis HOM05D004647 ORTHO05D005349 1.7e-105 386.3 244 79.9
TPR.G19928 Trifolium pratense HOM05D004647 ORTHO05D005349 2.2e-105 386.0 240 78.8
Lj5A124T65 Lonicera japonica HOM05D004647 ORTHO05D005349 8.4e-105 384.0 235 81.7
Lj2g0019057 Lotus japonicus HOM05D004647 ORTHO05D005349 8.4e-105 384.0 240 79.2
Ciclev10021986m.g Citrus clementina HOM05D004647 ORTHO05D005349 1.1e-104 383.6 240 78.8
Glyma.01G053700 Glycine max HOM05D004647 ORTHO05D005349 1.9e-104 382.9 240 78.8
Medtr5g043110 Medicago truncatula HOM05D004647 ORTHO05D005349 3.2e-104 382.1 240 77.9
Phvul.002G091200 Phaseolus vulgaris HOM05D004647 ORTHO05D005349 4.2e-104 381.7 240 77.9
TWI15G0781 Tripterygium wilfordii HOM05D004647 ORTHO05D005349 4.2e-104 381.7 243 79.0
GSVIVG01007738001 Vitis vinifera HOM05D004647 ORTHO05D005349 7.1e-104 380.9 231 81.8
MD06G1174300 Malus domestica HOM05D004647 ORTHO05D005349 1.2e-103 380.2 243 77.8
vmacro16607 Vaccinium macrocarpon HOM05D004647 ORTHO05D005349 1.6e-103 379.8 239 78.2
Phvul.003G111100 Phaseolus vulgaris HOM05D004647 ORTHO05D005349 2.1e-103 379.4 240 77.9
Actinidia19099 Actinidia chinensis HOM05D004647 ORTHO05D005349 2.7e-103 379.0 240 77.9
Eucgr.B00371 Eucalyptus grandis HOM05D004647 ORTHO05D005349 2.7e-103 379.0 240 78.3
Rhsim12G0164400 Rhododendron simsii HOM05D004647 ORTHO05D005349 2.7e-103 379.0 240 77.5
Atru.chr9.2461 Acer truncatum HOM05D004647 ORTHO05D005349 6.0e-103 377.9 240 77.1
Lalb_Chr10g0098541 Lupinus albus HOM05D004647 ORTHO05D005349 6.0e-103 377.9 232 80.2
Gorai.005G137000 Gossypium raimondii HOM05D004647 ORTHO05D005349 2.3e-102 375.9 240 77.5
Gohir.D02G116700 Gossypium hirsutum HOM05D004647 ORTHO05D005349 6.7e-102 374.4 240 77.1
TWI53G1063 Tripterygium wilfordii HOM05D004647 ORTHO05D005349 8.7e-102 374.0 243 78.2
CANSAT64G1060 Cannabis sativa HOM05D004647 ORTHO05D005349 1.1e-101 373.6 244 77.5
Gohir.A03G097600 Gossypium hirsutum HOM05D004647 ORTHO05D005349 1.5e-101 373.2 240 76.7
PGR083G2070 Punica granatum HOM05D004647 ORTHO05D005349 1.9e-101 372.9 240 76.7
QL10p011820 Quercus lobata HOM05D004647 ORTHO05D005349 1.9e-101 372.9 243 77.8
Ca_06453_v3 Cicer arietinum L. HOM05D004647 ORTHO05D005349 3.3e-101 372.1 221 82.4
DCAR_016485 Daucus carota HOM05D004647 ORTHO05D005349 2.1e-100 369.4 235 77.0
PSO017G4490 Papaver somniferum HOM05D004647 ORTHO05D005349 2.8e-100 369.0 238 76.1
RcHm_v2.0_Chr7g0193601 Rosa chinensis HOM05D004647 ORTHO05D005349 4.8e-100 368.2 230 78.3
Cc04_g13970 Coffea canephora HOM05D004647 ORTHO05D005349 6.2e-100 367.9 240 75.8
PSO478G0146 Papaver somniferum HOM05D004647 ORTHO05D005349 6.2e-100 367.9 238 75.6
Aqoxy3G01032 Aquilegia oxysepala HOM05D004647 ORTHO05D005349 1.1e-99 367.1 235 77.0
ATR0680G372 Amborella trichopoda HOM05D004647 ORTHO05D005349 1.4e-99 366.7 240 73.3
Hma1.2p1_0701F.1_g205920 Hydrangea macrophylla HOM05D004647 ORTHO05D005349 1.4e-99 366.7 231 78.8
Hund09433 Selenicereus undatus HOM05D004647 ORTHO05D005349 1.4e-99 366.7 240 75.8
FAN04G0366 Fragaria x ananassa HOM05D004647 ORTHO05D005349 1.8e-99 366.3 228 78.9
THA.LOC104807116 Tarenaya hassleriana HOM05D004647 ORTHO05D005349 2.4e-99 365.9 239 75.7
THA.LOC104824976 Tarenaya hassleriana HOM05D004647 ORTHO05D005349 2.4e-99 365.9 239 75.7
FAN13G1078 Fragaria x ananassa HOM05D004647 ORTHO05D005349 3.1e-99 365.5 230 78.3
Carub.0004s0503 Capsella rubella HOM05D004647 ORTHO05D005349 4.0e-99 365.2 239 74.9
Manes.14G066300 Manihot esculenta HOM05D004647 ORTHO05D005349 5.3e-99 364.8 212 83.5
Nitab4.5_0000003g0580 Nicotiana tabacum HOM05D004647 ORTHO05D005349 1.2e-98 363.6 239 73.2
AUR62030968 Chenopodium quinoa HOM05D004647 ORTHO05D005349 1.5e-98 363.2 240 74.6
FAN08G1047 Fragaria x ananassa HOM05D004647 ORTHO05D005349 2.0e-98 362.8 230 77.4
Nitab4.5_0000866g0170 Nicotiana tabacum HOM05D004647 ORTHO05D005349 3.4e-98 362.1 239 72.8
HPP92_005895 Vanilla planifolia HOM05D004647 ORTHO05D005349 7.6e-98 360.9 239 74.1
FAN18G2734 Fragaria x ananassa HOM05D004647 ORTHO05D005349 9.9e-98 360.5 230 77.0
Oeu035987.1 Olea europaea HOM05D004647 ORTHO05D005349 2.2e-97 359.4 240 75.0
CARHR059710 Cardamine hirsuta HOM05D004647 ORTHO05D005349 2.9e-97 359.0 239 73.6
MSTRG.11448 Avicennia marina HOM05D004647 ORTHO05D005349 8.4e-97 357.5 240 73.3
MBI16_g05634_MAGBIO Magnolia biondii HOM05D004647 ORTHO05D005349 4.2e-96 355.1 245 73.1
Sopen06g027740 Solanum pennellii HOM05D004647 ORTHO05D005349 5.5e-96 354.8 227 74.4
AL7G19680 Arabidopsis lyrata HOM05D004647 ORTHO05D005349 2.1e-95 352.8 236 74.2
QL02p100995 Quercus lobata HOM05D004647 ORTHO05D005349 2.1e-95 352.8 343 57.4
CAN.G628.78 Capsicum annuum HOM05D004647 ORTHO05D005349 1.0e-94 350.5 231 71.9
COL.COLO4_30028 Corchorus olitorius HOM05D004647 ORTHO05D005349 1.0e-94 350.5 273 66.7
Lsat_1_v5_gn_4_75321 Lactuca sativa HOM05D004647 ORTHO05D005349 1.3e-94 350.1 241 73.4
Sc10g0010060 Simmondsia chinensis HOM05D004647 ORTHO05D005349 1.3e-94 350.1 229 76.4
Solyc06g071460.3 Solanum lycopersicum HOM05D004647 ORTHO05D005349 2.3e-94 349.4 230 73.5
Os01g0891400 Oryza sativa ssp. japonica HOM05D004647 ORTHO05D005349 3.0e-94 349.0 230 74.8
AT4G32175 Arabidopsis thaliana HOM05D004647 ORTHO05D005349 3.9e-94 348.6 236 73.7
Migut.I00016 Erythranthe guttata HOM05D004647 ORTHO05D005349 5.1e-94 348.2 240 72.1
EL10Ac5g10752 Beta vulgaris HOM05D004647 ORTHO05D005349 8.7e-94 347.4 227 75.3
Os01g0661400 Oryza sativa ssp. japonica HOM05D004647 ORTHO05D005349 1.5e-93 346.7 230 73.9
Sp7g29960 Schrenkiella parvula HOM05D004647 ORTHO05D005349 1.9e-93 346.3 236 74.6
AUR62008215 Chenopodium quinoa HOM05D004647 ORTHO05D005349 2.5e-93 345.9 265 67.2
BcaC01g01036 Brassica carinata HOM05D004647 ORTHO05D005349 3.3e-93 345.5 236 73.3
A08p18330 Brassica napus HOM05D004647 ORTHO05D005349 3.3e-93 345.5 236 73.3
BraA08t33790Z Brassica rapa HOM05D004647 ORTHO05D005349 3.3e-93 345.5 236 73.3
PGSC0003DMG400027091 Solanum tuberosum HOM05D004647 ORTHO05D005349 3.3e-93 345.5 227 72.7
AT2G25355 Arabidopsis thaliana HOM05D004647 ORTHO05D005349 7.4e-93 344.4 234 71.4
Thecc.03G011300 Theobroma cacao HOM05D004647 ORTHO05D005349 1.6e-92 343.2 212 79.7
SGA_v2.0_scaffold90G27942 Striga asiatica HOM05D004647 ORTHO05D005349 2.1e-92 342.8 259 67.6
CSS0008435 Camellia sinensis var. sinensis HOM05D004647 ORTHO05D005349 3.7e-92 342.0 235 72.8
HanXRQChr16g0504011 Helianthus annuus HOM05D004647 ORTHO05D005349 4.8e-92 341.7 231 73.2
BolC3t21057H Brassica oleracea HOM05D004647 ORTHO05D005349 6.2e-92 341.3 236 72.9
MD06G1174500 Malus domestica HOM05D004647 ORTHO05D005349 1.1e-91 340.5 245 71.4
AL4G16790 Arabidopsis lyrata HOM05D004647 ORTHO05D005349 1.8e-91 339.7 234 70.1
TAR374G0909 Trochodendron aralioides HOM05D004647 ORTHO05D005349 1.8e-91 339.7 202 83.7
BcaB03g12733 Brassica carinata HOM05D004647 ORTHO05D005349 4.0e-91 338.6 227 74.4
CsaV3_1G001530 Cucumis sativus L. HOM05D004647 ORTHO05D005349 5.3e-91 338.2 171 97.7
FAN18G2015 Fragaria x ananassa HOM05D004647 ORTHO05D005349 1.2e-90 337.0 285 62.1
unitig_52.g17486 Utricularia gibba HOM05D004647 ORTHO05D005349 1.2e-90 337.0 240 70.8
FvH4_5g05270 Fragaria vesca HOM05D004647 ORTHO05D005349 2.0e-90 336.3 211 77.7
ECA232G2959 Erigeron canadensis HOM05D004647 ORTHO05D005349 1.7e-89 333.2 232 70.7
HanXRQChr16g0526511 Helianthus annuus HOM05D004647 ORTHO05D005349 2.2e-89 332.8 233 72.1
Thhalv10026115m.g Eutrema salsugineum HOM05D004647 ORTHO05D005349 2.9e-89 332.4 236 71.2
Zm00001eb157720 Zea mays HOM05D004647 ORTHO05D005349 1.4e-88 330.1 230 71.7
Cpa.g.sc124.56 Carica papaya HOM05D004647 ORTHO05D005349 4.2e-88 328.6 202 80.2
CARHR240100 Cardamine hirsuta HOM05D004647 ORTHO05D005349 5.5e-88 328.2 227 70.0
CDE11G0116 Ceratophyllum demersum HOM05D004647 ORTHO05D005349 1.2e-87 327.0 213 74.6
SalBow3G4197 Salvia bowleyana HOM05D004647 ORTHO05D005349 1.9e-85 319.7 283 60.4
DCAR_028017 Daucus carota HOM05D004647 ORTHO05D005349 3.3e-85 318.9 194 80.9
Peaxi162Scf00689g00228 Petunia axillaris HOM05D004647 ORTHO05D005349 5.9e-82 308.1 240 65.0
Haze_07464 Corylus avellana HOM05D004647 ORTHO05D005349 1.7e-81 306.6 244 68.0
Zm00001eb157740 Zea mays HOM05D004647 ORTHO05D005349 3.2e-80 302.4 204 73.0
Carub.0007s0838 Capsella rubella HOM05D004647 ORTHO05D005349 1.8e-78 296.6 186 77.4
Mapoly0033s0011 Marchantia polymorpha HOM05D004647 ORTHO05D005349 1.2e-74 283.9 231 59.7
Aa31LG2G17760 Aethionema arabicum HOM05D004647 ORTHO05D005349 2.6e-74 282.7 235 63.8
Pp3c9_4960 Physcomitrium patens HOM05D004647 ORTHO05D005349 5.5e-72 275.0 230 60.0
Dinv02900 Davidia involucrata HOM05D004647 ORTHO05D005349 3.6e-71 272.3 176 75.0
SMO358G0755 Selaginella moellendorffii HOM05D004647 ORTHO05D005349 1.4e-70 270.4 225 58.7
THA.LOC104801749 Tarenaya hassleriana HOM05D004647 ORTHO05D005349 2.4e-67 259.6 167 75.4
MELO3C026290.2 Cucumis melo HOM05D004647 ORTHO05D005349 7.0e-67 258.1 135 95.6
Sed0007118 Sechium edule HOM05D004647 ORTHO05D005349 8.0e-63 244.6 182 71.4
THA.LOC104815465 Tarenaya hassleriana HOM05D004647 ORTHO05D005349 6.7e-62 241.5 149 77.9
Nn3g16872 Nelumbo nucifera HOM05D004647 ORTHO05D005349 4.8e-60 235.3 145 76.6
AagrBONN_evm.TU.Sc2ySwM_117.3294 Anthoceros agrestis HOM05D004647 ORTHO05D005349 7.7e-58 228.0 192 58.3
SEGI_17588 Sequoiadendron giganteum HOM05D004647 ORTHO05D005349 9.7e-53 211.1 140 75.0
SEGI_39775 Sequoiadendron giganteum HOM05D004647 ORTHO05D005349 9.7e-53 211.1 140 75.0
Cre07.g319900 Chlamydomonas reinhardtii HOM05D004647 ORTHO05D005349 1.7e-49 200.3 232 44.0
QL02p101105 Quercus lobata HOM05D004647 ORTHO05D005349 2.2e-49 199.9 123 82.1
VMungo1215G1703 Vigna mungo HOM05D004647 ORTHO05D005349 2.9e-49 199.5 123 79.7
QL02p101061 Quercus lobata HOM05D004647 ORTHO05D005349 3.8e-49 199.1 123 82.1
PSO384G3338 Papaver somniferum HOM05D004647 ORTHO05D005349 9.4e-48 194.5 169 60.9
VMungo1215G3307 Vigna mungo HOM05D004647 ORTHO05D005349 3.6e-47 192.6 120 76.7
Zm00001eb359590 Zea mays HOM05D004647 ORTHO05D005349 4.0e-46 189.1 131 69.5
CSS0025503 Camellia sinensis var. sinensis HOM05D004647 ORTHO05D005349 1.5e-45 187.2 126 72.2
Medtr5g009430 Medicago truncatula HOM05D004647 ORTHO05D005349 2.6e-45 186.4 119 73.9
CBR_g61059 Chara braunii HOM05D004647 ORTHO05D005349 9.1e-43 177.9 227 45.4
Ca_07701_v3 Cicer arietinum L. HOM05D004647 ORTHO05D005349 1.5e-37 160.6 128 65.6
Glyma.19G045000 Glycine max HOM05D004647 ORTHO05D005349 5.9e-34 148.7 120 62.5
CAN.G110.1 Capsicum annuum HOM05D004647 ORTHO05D005349 1.3e-33 147.5 151 53.0
SEGI_00924 Sequoiadendron giganteum HOM05D004647 ORTHO05D005349 2.3e-30 136.7 100 70.0
CSS0039197 Camellia sinensis var. sinensis HOM05D004647 ORTHO05D005349 5.8e-29 132.1 111 64.9
Oeu005668.1 Olea europaea HOM05D004647 ORTHO05D005349 5.8e-29 132.1 85 74.1
PRCOL_00002933 Prasinoderma coloniale HOM05D004647 ORTHO05D005349 9.8e-29 131.3 183 41.5
Cc00_g25260 Coffea canephora HOM05D004647 ORTHO05D005349 2.2e-28 130.2 81 79.0
Cfa024128 Carpinus fangiana HOM05D004647 ORTHO05D005349 2.9e-28 129.8 219 37.4
SEGI_26695 Sequoiadendron giganteum HOM05D004647 ORTHO05D005349 4.1e-27 125.9 147 41.5
Cc00_g18100 Coffea canephora HOM05D004647 ORTHO05D005349 9.2e-27 124.8 89 68.5
Ca_22423_v3 Cicer arietinum L. HOM05D004647 ORTHO05D005349 1.5e-24 117.5 100 66.0
Ca_24957_v3 Cicer arietinum L. HOM05D004647 ORTHO05D005349 7.3e-24 115.2 106 58.5
PGSC0003DMG400042364 Solanum tuberosum HOM05D004647 ORTHO05D005349 1.4e-22 110.9 80 67.5
MCO01G631 Micromonas commoda HOM05D004647 ORTHO05D005349 3.1e-22 109.8 184 34.8
Potri.015G075400 Populus trichocarpa HOM05D004647 ORTHO05D005349 5.8e-21 105.5 71 70.4
CSS0048825 Camellia sinensis var. sinensis HOM05D004647 ORTHO05D005349 6.0e-18 95.5 54 85.2
MD14G1181100 Malus domestica HOM05D004647 ORTHO05D005349 1.7e-17 94.0 166 42.2
Cc00_g33640 Coffea canephora HOM05D004647 ORTHO05D005349 3.9e-17 92.8 51 82.4
SEGI_09107 Sequoiadendron giganteum HOM05D004647 ORTHO05D005349 5.2e-14 82.4 53 69.8
QL02p027014 Quercus lobata HOM05D004647 ORTHO05D005349 9.5e-08 61.6 32 84.4
SHI17043 Sapria himalayana HOM05D004647 ORTHO05D005349 1.1e-06 58.2 30 90.0
QL02p024044 Quercus lobata HOM05D004647 ORTHO05D005349 1.4e-06 57.8 33 72.7
Medtr5g009450 Medicago truncatula HOM05D004647 ORTHO05D005349 8.9e-06 55.1 37 78.4


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