Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG01G017380 Citrullus lanatus HOM05D001054 ORTHO05D007110 0.0e+00 1090.5 531 100.0
MELO3C007616.2 Cucumis melo HOM05D001054 ORTHO05D007110 3.4e-308 1060.8 561 93.4
CsaV3_6G043910 Cucumis sativus L. HOM05D001054 ORTHO05D007110 9.8e-308 1059.3 535 96.3
Sed0024674 Sechium edule HOM05D001054 ORTHO05D007110 7.5e-300 1033.1 535 94.0
Sed0014779 Sechium edule HOM05D001054 ORTHO05D007110 1.8e-298 1028.5 535 93.6
Nn7g37208 Nelumbo nucifera HOM05D001054 ORTHO05D007110 2.7e-273 944.9 539 83.9
Cpa.g.sc6.46 Carica papaya HOM05D001054 ORTHO05D007110 1.3e-272 942.6 540 84.3
CANSAT01G2549 Cannabis sativa HOM05D001054 ORTHO05D007110 1.7e-272 942.2 540 84.3
Cfa004102 Carpinus fangiana HOM05D001054 ORTHO05D007110 1.5e-271 939.1 536 84.0
Prupe.6G223800 Prunus persica HOM05D001054 ORTHO05D007110 3.6e-270 934.5 536 82.8
Thecc.01G069100 Theobroma cacao HOM05D001054 ORTHO05D007110 6.2e-270 933.7 536 84.1
TWI09G0178 Tripterygium wilfordii HOM05D001054 ORTHO05D007110 1.1e-269 932.9 539 82.4
Gorai.008G080600 Gossypium raimondii HOM05D001054 ORTHO05D007110 1.5e-268 929.1 536 83.2
PGR004G0129 Punica granatum HOM05D001054 ORTHO05D007110 1.3e-267 926.0 536 82.6
Gohir.D12G073300 Gossypium hirsutum HOM05D001054 ORTHO05D007110 2.9e-267 924.9 536 82.8
Eucgr.C03692 Eucalyptus grandis HOM05D001054 ORTHO05D007110 6.4e-267 923.7 541 81.7
TAR625G0225 Trochodendron aralioides HOM05D001054 ORTHO05D007110 8.4e-267 923.3 539 82.4
CiPaw.01G007000 Carya illinoinensis HOM05D001054 ORTHO05D007110 1.1e-266 922.9 536 83.0
FvH4_1g17270 Fragaria vesca HOM05D001054 ORTHO05D007110 1.1e-266 922.9 536 83.0
Atru.chr3.194 Acer truncatum HOM05D001054 ORTHO05D007110 1.4e-266 922.5 539 82.7
Manes.13G113500 Manihot esculenta HOM05D001054 ORTHO05D007110 1.9e-266 922.2 535 83.0
Atru.chr3.165 Acer truncatum HOM05D001054 ORTHO05D007110 4.2e-266 921.0 542 82.3
Haze_15309 Corylus avellana HOM05D001054 ORTHO05D007110 4.2e-266 921.0 552 80.6
FAN19G1445 Fragaria x ananassa HOM05D001054 ORTHO05D007110 7.1e-266 920.2 545 81.7
Duzib264G0621 Durio zibethinus HOM05D001054 ORTHO05D007110 8.7e-264 913.3 536 82.1
RcHm_v2.0_Chr2g0107461 Rosa chinensis HOM05D001054 ORTHO05D007110 1.1e-263 912.9 591 76.0
TAR628G0943 Trochodendron aralioides HOM05D001054 ORTHO05D007110 1.9e-263 912.1 539 80.7
Hma1.2p1_0017F.1_g012090 Hydrangea macrophylla HOM05D001054 ORTHO05D007110 4.3e-263 911.0 535 81.5
FAN26G1436 Fragaria x ananassa HOM05D001054 ORTHO05D007110 1.3e-262 909.4 571 77.9
MSTRG.23690 Avicennia marina HOM05D001054 ORTHO05D007110 2.1e-262 908.7 535 81.5
Lj7C88G8 Lonicera japonica HOM05D001054 ORTHO05D007110 2.8e-262 908.3 534 81.5
Eucgr.C03920 Eucalyptus grandis HOM05D001054 ORTHO05D007110 8.1e-262 906.7 541 80.2
FAN23G1327 Fragaria x ananassa HOM05D001054 ORTHO05D007110 8.1e-262 906.7 557 78.5
DCAR_010834 Daucus carota HOM05D001054 ORTHO05D007110 4.0e-261 904.4 548 79.6
Aa31LG6G14390 Aethionema arabicum HOM05D001054 ORTHO05D007110 1.5e-260 902.5 537 81.0
MBI19_g10811_MAGBIO Magnolia biondii HOM05D001054 ORTHO05D007110 2.0e-260 902.1 536 81.3
Sabra07G0046600 Salix brachista HOM05D001054 ORTHO05D007110 2.0e-260 902.1 531 81.7
COL.COLO4_11542 Corchorus olitorius HOM05D001054 ORTHO05D007110 2.6e-260 901.7 535 80.2
Potri.007G053000 Populus trichocarpa HOM05D001054 ORTHO05D007110 2.6e-260 901.7 535 81.3
CARHR245910 Cardamine hirsuta HOM05D001054 ORTHO05D007110 4.4e-260 901.0 535 81.3
Ciclev10025341m.g Citrus clementina HOM05D001054 ORTHO05D007110 7.6e-260 900.2 535 80.4
Oeu013280.1 Olea europaea HOM05D001054 ORTHO05D007110 9.9e-260 899.8 535 81.1
Cc07_g06840 Coffea canephora HOM05D001054 ORTHO05D007110 1.7e-259 899.0 540 80.4
AL7G13250 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 2.9e-259 898.3 533 81.6
Carub.0007s0278 Capsella rubella HOM05D001054 ORTHO05D007110 8.4e-259 896.7 533 81.1
Thhalv10024858m.g Eutrema salsugineum HOM05D001054 ORTHO05D007110 4.2e-258 894.4 525 81.9
PSO541G5579 Papaver somniferum HOM05D001054 ORTHO05D007110 4.2e-258 894.4 536 80.0
AT4G37510 Arabidopsis thaliana HOM05D001054 ORTHO05D007110 7.1e-258 893.6 533 81.4
HanXRQChr14g0441861 Helianthus annuus HOM05D001054 ORTHO05D007110 1.2e-257 892.9 518 81.3
PSO675G2247 Papaver somniferum HOM05D001054 ORTHO05D007110 1.6e-257 892.5 536 79.9
THA.LOC104807624 Tarenaya hassleriana HOM05D001054 ORTHO05D007110 2.1e-257 892.1 537 81.2
SalBow6G1211 Salvia bowleyana HOM05D001054 ORTHO05D007110 7.9e-257 890.2 535 79.3
Aqoxy2G00045 Aquilegia oxysepala HOM05D001054 ORTHO05D007110 2.3e-256 888.6 546 79.1
Sp7g35190 Schrenkiella parvula HOM05D001054 ORTHO05D007110 3.0e-256 888.3 525 81.1
Lj2g0007837 Lotus japonicus HOM05D001054 ORTHO05D007110 1.9e-255 885.6 538 80.5
Solyc10g080040.3 Solanum lycopersicum HOM05D001054 ORTHO05D007110 1.9e-255 885.6 535 79.8
Nitab4.5_0002331g0050 Nicotiana tabacum HOM05D001054 ORTHO05D007110 2.5e-255 885.2 531 80.6
PGSC0003DMG400023692 Solanum tuberosum HOM05D001054 ORTHO05D007110 2.5e-255 885.2 535 79.8
Peaxi162Scf00365g00936 Petunia axillaris HOM05D001054 ORTHO05D007110 3.3e-255 884.8 532 80.3
Sopen10g030650 Solanum pennellii HOM05D001054 ORTHO05D007110 4.3e-255 884.4 535 79.6
Nitab4.5_0006689g0010 Nicotiana tabacum HOM05D001054 ORTHO05D007110 7.3e-255 883.6 531 80.2
DCAR_021470 Daucus carota HOM05D001054 ORTHO05D007110 1.3e-254 882.9 519 81.3
Lalb_Chr05g0213551 Lupinus albus HOM05D001054 ORTHO05D007110 1.6e-254 882.5 532 80.6
Migut.H00367 Erythranthe guttata HOM05D001054 ORTHO05D007110 2.8e-254 881.7 538 78.8
SGA_v2.0_scaffold15G07420 Striga asiatica HOM05D001054 ORTHO05D007110 4.8e-254 880.9 532 80.1
Glyma.11G049900 Glycine max HOM05D001054 ORTHO05D007110 1.8e-253 879.0 541 79.7
SGA_v2.0_scaffold72G24093 Striga asiatica HOM05D001054 ORTHO05D007110 3.1e-253 878.2 519 79.6
Psat2g170280 Pisum sativum HOM05D001054 ORTHO05D007110 6.9e-253 877.1 539 78.7
Rhsim10G0102900 Rhododendron simsii HOM05D001054 ORTHO05D007110 5.8e-252 874.0 590 72.9
Lsat_1_v5_gn_2_83701 Lactuca sativa HOM05D001054 ORTHO05D007110 9.9e-252 873.2 537 78.0
Medtr5g016070 Medicago truncatula HOM05D001054 ORTHO05D007110 8.4e-251 870.2 538 79.0
VMungo1215G2035 Vigna mungo HOM05D001054 ORTHO05D007110 3.2e-250 868.2 536 80.2
Sc16g0004970 Simmondsia chinensis HOM05D001054 ORTHO05D007110 7.1e-250 867.1 539 77.7
TPR.G20955 Trifolium pratense HOM05D001054 ORTHO05D007110 9.3e-250 866.7 543 77.9
Phvul.002G012600 Phaseolus vulgaris HOM05D001054 ORTHO05D007110 1.6e-249 865.9 537 79.9
Glyma.01G192200 Glycine max HOM05D001054 ORTHO05D007110 3.5e-249 864.8 541 79.3
CDE04G1953 Ceratophyllum demersum HOM05D001054 ORTHO05D007110 7.9e-249 863.6 538 79.9
Ca_24720_v3 Cicer arietinum L. HOM05D001054 ORTHO05D007110 3.9e-248 861.3 536 78.4
BraA01t00139Z Brassica rapa HOM05D001054 ORTHO05D007110 1.1e-247 859.8 538 78.1
BcaNung03665 Brassica carinata HOM05D001054 ORTHO05D007110 1.5e-247 859.4 544 77.4
C01p01620 Brassica napus HOM05D001054 ORTHO05D007110 1.5e-247 859.4 544 77.4
ATR1096G061 Amborella trichopoda HOM05D001054 ORTHO05D007110 2.5e-247 858.6 533 77.1
A01p01450 Brassica napus HOM05D001054 ORTHO05D007110 2.5e-247 858.6 538 78.1
Lalb_Chr09g0323511 Lupinus albus HOM05D001054 ORTHO05D007110 2.8e-246 855.1 548 76.8
EL10Ac6g15648 Beta vulgaris HOM05D001054 ORTHO05D007110 1.4e-245 852.8 538 75.8
BolC1t00157H Brassica oleracea HOM05D001054 ORTHO05D007110 1.4e-245 852.8 545 77.1
BcaNung05084 Brassica carinata HOM05D001054 ORTHO05D007110 1.8e-245 852.4 538 77.1
arahy.Tifrunner.gnm1.ann1.AR4BCX Arachis hypogaea HOM05D001054 ORTHO05D007110 3.1e-245 851.7 542 77.9
Hund13932 Selenicereus undatus HOM05D001054 ORTHO05D007110 1.5e-244 849.4 539 76.6
arahy.Tifrunner.gnm1.ann1.UKA06W Arachis hypogaea HOM05D001054 ORTHO05D007110 2.0e-244 849.0 545 77.8
AUR62003982 Chenopodium quinoa HOM05D001054 ORTHO05D007110 4.5e-244 847.8 539 75.7
AUR62040267 Chenopodium quinoa HOM05D001054 ORTHO05D007110 3.8e-243 844.7 539 75.5
arahy.Tifrunner.gnm1.ann1.5YK3TE Arachis hypogaea HOM05D001054 ORTHO05D007110 1.1e-242 843.2 542 75.5
unitig_0.g506 Utricularia gibba HOM05D001054 ORTHO05D007110 1.9e-242 842.4 469 84.2
arahy.Tifrunner.gnm1.ann1.S94KHE Arachis hypogaea HOM05D001054 ORTHO05D007110 1.2e-241 839.7 561 75.4
arahy.Tifrunner.gnm1.ann1.V4EKGG Arachis hypogaea HOM05D001054 ORTHO05D007110 3.9e-240 834.7 561 75.0
CSS0030463 Camellia sinensis var. sinensis HOM05D001054 ORTHO05D007110 1.0e-235 820.1 525 76.0
Os01g0810100 Oryza sativa ssp. japonica HOM05D001054 ORTHO05D007110 6.5e-235 817.4 483 79.3
arahy.Tifrunner.gnm1.ann1.SB8Z2H Arachis hypogaea HOM05D001054 ORTHO05D007110 8.4e-235 817.0 564 71.6
HPP92_018502 Vanilla planifolia HOM05D001054 ORTHO05D007110 1.6e-233 812.8 545 73.0
VMungo0251G1033 Vigna mungo HOM05D001054 ORTHO05D007110 2.1e-233 812.4 537 74.5
Lj4g0019986 Lotus japonicus HOM05D001054 ORTHO05D007110 4.8e-230 801.2 538 73.4
Phvul.003G236900 Phaseolus vulgaris HOM05D001054 ORTHO05D007110 8.2e-230 800.4 537 73.2
HPP92_017544 Vanilla planifolia HOM05D001054 ORTHO05D007110 2.1e-217 759.2 477 75.3
Medtr4g095410 Medicago truncatula HOM05D001054 ORTHO05D007110 4.8e-214 748.0 532 69.9
TPR.G23864 Trifolium pratense HOM05D001054 ORTHO05D007110 7.0e-213 744.2 536 68.1
ECA238G1085 Erigeron canadensis HOM05D001054 ORTHO05D007110 1.7e-206 723.0 398 82.9
Ah.02g125600 Amaranthus hybridus HOM05D001054 ORTHO05D007110 1.4e-205 719.9 426 77.9
Zm00001eb150280 Zea mays HOM05D001054 ORTHO05D007110 7.0e-205 717.6 466 73.8
Gohir.A12G075200 Gossypium hirsutum HOM05D001054 ORTHO05D007110 3.8e-203 711.8 432 78.7
Dinv26904 Davidia involucrata HOM05D001054 ORTHO05D007110 7.0e-189 664.5 408 79.4
Actinidia36442 Actinidia chinensis HOM05D001054 ORTHO05D007110 1.2e-188 663.7 511 66.1
Psat4g083600 Pisum sativum HOM05D001054 ORTHO05D007110 4.0e-184 648.7 398 75.9
CSS0024742 Camellia sinensis var. sinensis HOM05D001054 ORTHO05D007110 4.4e-175 618.6 332 84.9
AL5G41245 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 4.6e-156 555.4 401 70.8
Pp3c5_10700 Physcomitrium patens HOM05D001054 ORTHO05D007110 7.3e-154 548.1 469 58.0
Mapoly0005s0153 Marchantia polymorpha HOM05D001054 ORTHO05D007110 4.7e-153 545.4 468 57.1
GSVIVG01000148001 Vitis vinifera HOM05D001054 ORTHO05D007110 6.8e-152 541.6 283 88.0
HPP92_017568 Vanilla planifolia HOM05D001054 ORTHO05D007110 9.9e-151 537.7 396 67.9
vmacro05387 Vaccinium macrocarpon HOM05D001054 ORTHO05D007110 7.9e-132 474.9 346 66.5
SEGI_29234 Sequoiadendron giganteum HOM05D001054 ORTHO05D007110 1.0e-131 474.6 364 62.9
SMO119G0428 Selaginella moellendorffii HOM05D001054 ORTHO05D007110 6.7e-131 471.9 451 52.8
AagrBONN_evm.TU.Sc2ySwM_368.879 Anthoceros agrestis HOM05D001054 ORTHO05D007110 6.2e-129 465.3 463 51.4
Glyma.05G104100 Glycine max HOM05D001054 ORTHO05D007110 1.4e-128 464.2 330 70.6
vmacro05388 Vaccinium macrocarpon HOM05D001054 ORTHO05D007110 1.1e-109 401.4 270 74.8
FAN28G0670 Fragaria x ananassa HOM05D001054 ORTHO05D007110 1.4e-96 357.8 230 77.8
MD15G1293700 Malus domestica HOM05D001054 ORTHO05D007110 7.5e-90 335.5 181 84.5
Duzib147G0207 Durio zibethinus HOM05D001054 ORTHO05D007110 2.2e-86 323.9 182 83.5
AL7G13080 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 7.2e-77 292.4 168 79.2
SEGI_10508 Sequoiadendron giganteum HOM05D001054 ORTHO05D007110 3.7e-57 226.9 135 76.3
Actinidia11996 Actinidia chinensis HOM05D001054 ORTHO05D007110 3.9e-46 190.3 115 79.1
Eucgr.C03694 Eucalyptus grandis HOM05D001054 ORTHO05D026867 1.5e-42 178.3 102 80.4
Actinidia11995 Actinidia chinensis HOM05D001054 ORTHO05D038022 1.8e-35 154.8 81 87.7
Oeu038701.1 Olea europaea HOM05D001054 ORTHO05D038022 5.8e-26 123.2 66 80.3
AT2G48121 Arabidopsis thaliana HOM05D001054 ORTHO05D026867 7.4e-21 106.3 58 84.5
A03p65210 Brassica napus HOM05D001054 ORTHO05D026867 1.6e-20 105.1 62 77.4
BraA03t15579Z Brassica rapa HOM05D001054 ORTHO05D026867 1.6e-20 105.1 62 77.4
C07p62420 Brassica napus HOM05D001054 ORTHO05D007110 6.2e-20 103.2 56 80.4
BcaNung02059 Brassica carinata HOM05D001054 ORTHO05D007110 9.9e-18 95.9 50 80.0
Sed0007349 Sechium edule HOM05D001054 ORTHO05D007110 1.4e-16 92.0 78 62.8
Sed0024086 Sechium edule HOM05D001054 ORTHO05D373058 2.0e-10 71.6 81 58.0


User provided reference genes

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