Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG01G015310 Citrullus lanatus HOM05D001486 ORTHO05D004921 3.0e-58 228.4 123 100.0
QL03p035815 Quercus lobata HOM05D001486 ORTHO05D004921 7.9e-27 124.0 56 98.2
Sed0010499 Sechium edule HOM05D001486 ORTHO05D004921 7.9e-27 124.0 56 98.2
CANSAT01G0610 Cannabis sativa HOM05D001486 ORTHO05D004921 1.0e-26 123.6 56 96.4
Thecc.02G292500 Theobroma cacao HOM05D001486 ORTHO05D004921 1.0e-26 123.6 56 96.4
Dinv07730 Davidia involucrata HOM05D001486 ORTHO05D004921 1.3e-26 123.2 56 96.4
Rhsim09G0089500 Rhododendron simsii HOM05D001486 ORTHO05D004921 1.8e-26 122.9 56 96.4
SalBow2G2685 Salvia bowleyana HOM05D001486 ORTHO05D004921 1.8e-26 122.9 58 94.8
Nn4g24372 Nelumbo nucifera HOM05D001486 ORTHO05D004921 2.3e-26 122.5 56 94.6
GSVIVG01011661001 Vitis vinifera HOM05D001486 ORTHO05D004921 2.3e-26 122.5 56 94.6
FAN07G1595 Fragaria x ananassa HOM05D001486 ORTHO05D004921 3.0e-26 122.1 56 94.6
Hma1.2p1_0705F.1_g206910 Hydrangea macrophylla HOM05D001486 ORTHO05D004921 3.9e-26 121.7 56 96.4
Haze_10881 Corylus avellana HOM05D001486 ORTHO05D004921 5.1e-26 121.3 59 89.8
Gohir.D02G139700 Gossypium hirsutum HOM05D001486 ORTHO05D004921 5.1e-26 121.3 56 94.6
Gorai.005G157100 Gossypium raimondii HOM05D001486 ORTHO05D004921 5.1e-26 121.3 56 94.6
FvH4_1g18130 Fragaria vesca HOM05D001486 ORTHO05D004921 8.7e-26 120.6 56 92.9
FvH4_4g33560 Fragaria vesca HOM05D001486 ORTHO05D004921 8.7e-26 120.6 56 92.9
FAN12G0503 Fragaria x ananassa HOM05D001486 ORTHO05D004921 8.7e-26 120.6 56 92.9
FAN22G2372 Fragaria x ananassa HOM05D001486 ORTHO05D004921 8.7e-26 120.6 56 92.9
Glyma.05G238800 Glycine max HOM05D001486 ORTHO05D004921 8.7e-26 120.6 56 94.6
Glyma.08G045900 Glycine max HOM05D001486 ORTHO05D004921 8.7e-26 120.6 56 94.6
Lj4g0010019 Lotus japonicus HOM05D001486 ORTHO05D004921 8.7e-26 120.6 56 94.6
RcHm_v2.0_Chr4g0443061 Rosa chinensis HOM05D001486 ORTHO05D004921 8.7e-26 120.6 56 92.9
TWI74G0959 Tripterygium wilfordii HOM05D001486 ORTHO05D004921 8.7e-26 120.6 56 94.6
ClCG07G005610 Citrullus lanatus HOM05D001486 ORTHO05D004921 1.1e-25 120.2 55 98.2
MELO3C026441.2 Cucumis melo HOM05D001486 ORTHO05D004921 1.1e-25 120.2 55 98.2
CsaV3_5G015740 Cucumis sativus L. HOM05D001486 ORTHO05D004921 1.1e-25 120.2 55 98.2
Manes.17G083900 Manihot esculenta HOM05D001486 ORTHO05D004921 1.1e-25 120.2 56 92.9
Cc04_g10510 Coffea canephora HOM05D001486 ORTHO05D004921 1.5e-25 119.8 56 91.1
DCAR_007329 Daucus carota HOM05D001486 ORTHO05D004921 1.9e-25 119.4 56 89.3
arahy.Tifrunner.gnm1.ann1.FK3VI9 Arachis hypogaea HOM05D001486 ORTHO05D004921 2.5e-25 119.0 56 92.9
arahy.Tifrunner.gnm1.ann1.WZE3XK Arachis hypogaea HOM05D001486 ORTHO05D004921 2.5e-25 119.0 56 92.9
Ca_17277_v3 Cicer arietinum L. HOM05D001486 ORTHO05D004921 2.5e-25 119.0 56 92.9
Duzib251G0538 Durio zibethinus HOM05D001486 ORTHO05D004921 2.5e-25 119.0 56 94.6
Duzib268G0355 Durio zibethinus HOM05D001486 ORTHO05D004921 2.5e-25 119.0 56 94.6
Migut.E00481 Erythranthe guttata HOM05D001486 ORTHO05D004921 2.5e-25 119.0 55 96.4
Medtr8g105290 Medicago truncatula HOM05D001486 ORTHO05D004921 2.5e-25 119.0 56 92.9
TPR.G19252 Trifolium pratense HOM05D001486 ORTHO05D004921 2.5e-25 119.0 56 92.9
EL10Ac3g06288 Beta vulgaris HOM05D001486 ORTHO05D004921 3.3e-25 118.6 56 92.9
AUR62002589 Chenopodium quinoa HOM05D001486 ORTHO05D004921 3.3e-25 118.6 56 92.9
AUR62030013 Chenopodium quinoa HOM05D001486 ORTHO05D004921 3.3e-25 118.6 56 92.9
FAN17G1739 Fragaria x ananassa HOM05D001486 ORTHO05D004921 3.3e-25 118.6 56 91.1
TAR629G0611 Trochodendron aralioides HOM05D001486 ORTHO05D004921 3.3e-25 118.6 56 96.4
Aqoxy7G03241 Aquilegia oxysepala HOM05D001486 ORTHO05D004921 4.3e-25 118.2 56 94.6
Lj3A864G85 Lonicera japonica HOM05D001486 ORTHO05D004921 4.3e-25 118.2 56 94.6
Phvul.002G321200 Phaseolus vulgaris HOM05D001486 ORTHO05D004921 4.3e-25 118.2 56 92.9
Sc11g0004180 Simmondsia chinensis HOM05D001486 ORTHO05D004921 4.3e-25 118.2 56 92.9
VMungo0251G0466 Vigna mungo HOM05D001486 ORTHO05D004921 4.3e-25 118.2 56 92.9
Actinidia12394 Actinidia chinensis HOM05D001486 ORTHO05D004921 5.7e-25 117.9 56 91.1
THA.LOC104823681 Tarenaya hassleriana HOM05D001486 ORTHO05D004921 5.7e-25 117.9 56 92.9
vmacro10693 Vaccinium macrocarpon HOM05D001486 ORTHO05D004921 5.7e-25 117.9 55 94.5
Oeu064208.1 Olea europaea HOM05D001486 ORTHO05D004921 7.4e-25 117.5 56 91.1
Prupe.1G333300 Prunus persica HOM05D001486 ORTHO05D004921 7.4e-25 117.5 56 92.9
Eucgr.G02106 Eucalyptus grandis HOM05D001486 ORTHO05D004921 9.7e-25 117.1 56 91.1
Lsat_1_v5_gn_8_46521 Lactuca sativa HOM05D001486 ORTHO05D004921 9.7e-25 117.1 56 94.6
MD13G1020400 Malus domestica HOM05D001486 ORTHO05D004921 9.7e-25 117.1 56 92.9
SGA_v2.0_scaffold23G10214 Striga asiatica HOM05D001486 ORTHO05D004921 9.7e-25 117.1 55 94.5
Actinidia36627 Actinidia chinensis HOM05D001486 ORTHO05D004921 1.3e-24 116.7 56 91.1
COL.COLO4_16588 Corchorus olitorius HOM05D001486 ORTHO05D004921 1.3e-24 116.7 56 92.9
Lalb_Chr09g0330891 Lupinus albus HOM05D001486 ORTHO05D004921 1.6e-24 116.3 61 85.2
Atru.chr11.925 Acer truncatum HOM05D001486 ORTHO05D004921 2.2e-24 115.9 56 89.3
CSS0037038 Camellia sinensis var. sinensis HOM05D001486 ORTHO05D004921 2.2e-24 115.9 56 91.1
PGR142G2431 Punica granatum HOM05D001486 ORTHO05D004921 2.2e-24 115.9 55 92.7
Ciclev10014036m.g Citrus clementina HOM05D001486 ORTHO05D004921 2.8e-24 115.5 56 89.3
Lalb_Chr05g0222211 Lupinus albus HOM05D001486 ORTHO05D004921 2.8e-24 115.5 56 89.3
Psat7g007960 Pisum sativum HOM05D001486 ORTHO05D004921 2.8e-24 115.5 56 89.3
Ah.13g072990 Amaranthus hybridus HOM05D001486 ORTHO05D004921 3.7e-24 115.2 56 89.3
MSTRG.2128 Avicennia marina HOM05D001486 ORTHO05D004921 4.8e-24 114.8 56 89.3
CAN.G149.16 Capsicum annuum HOM05D001486 ORTHO05D004921 4.8e-24 114.8 56 89.3
CAN.G601.1 Capsicum annuum HOM05D001486 ORTHO05D004921 4.8e-24 114.8 56 89.3
Aqoxy3G03310 Aquilegia oxysepala HOM05D001486 ORTHO05D004921 6.3e-24 114.4 56 91.1
Solyc07g008160.3 Solanum lycopersicum HOM05D001486 ORTHO05D004921 6.3e-24 114.4 56 87.5
Sopen07g004030 Solanum pennellii HOM05D001486 ORTHO05D004921 6.3e-24 114.4 56 87.5
HanXRQChr08g0212501 Helianthus annuus HOM05D001486 ORTHO05D004921 8.2e-24 114.0 56 92.9
Sabra08G0102800 Salix brachista HOM05D001486 ORTHO05D004921 8.2e-24 114.0 56 87.5
unitig_27.g25160 Utricularia gibba HOM05D001486 ORTHO05D004921 8.2e-24 114.0 55 89.1
CDE06G1861 Ceratophyllum demersum HOM05D001486 ORTHO05D004921 1.1e-23 113.6 56 91.1
Potri.008G134800 Populus trichocarpa HOM05D001486 ORTHO05D004921 1.4e-23 113.2 56 87.5
ECA233G0786 Erigeron canadensis HOM05D001486 ORTHO05D004921 1.8e-23 112.8 56 91.1
BcaB08g34420 Brassica carinata HOM05D001486 ORTHO05D004921 2.4e-23 112.5 55 90.9
BcaC07g41534 Brassica carinata HOM05D001486 ORTHO05D004921 2.4e-23 112.5 55 90.9
A09p61750 Brassica napus HOM05D001486 ORTHO05D004921 2.4e-23 112.5 55 90.9
C08p45360 Brassica napus HOM05D001486 ORTHO05D004921 2.4e-23 112.5 55 90.9
BolC8t52091H Brassica oleracea HOM05D001486 ORTHO05D004921 2.4e-23 112.5 55 90.9
BraA09t41545Z Brassica rapa HOM05D001486 ORTHO05D004921 2.4e-23 112.5 55 90.9
HanXRQChr12g0363231 Helianthus annuus HOM05D001486 ORTHO05D004921 2.4e-23 112.5 58 89.7
Sp1g13290 Schrenkiella parvula HOM05D001486 ORTHO05D004921 2.4e-23 112.5 55 90.9
SGA_v2.0_scaffold23G10209 Striga asiatica HOM05D001486 ORTHO05D004921 2.4e-23 112.5 57 91.2
PSO782G0822 Papaver somniferum HOM05D001486 ORTHO05D004921 3.1e-23 112.1 56 89.3
Hund13366 Selenicereus undatus HOM05D001486 ORTHO05D004921 3.1e-23 112.1 56 91.1
C05p12830 Brassica napus HOM05D001486 ORTHO05D004921 4.1e-23 111.7 55 89.1
BcaB02g06554 Brassica carinata HOM05D001486 ORTHO05D004921 5.3e-23 111.3 55 89.1
BcaC05g25406 Brassica carinata HOM05D001486 ORTHO05D004921 5.3e-23 111.3 55 89.1
BolC5t30028H Brassica oleracea HOM05D001486 ORTHO05D004921 5.3e-23 111.3 55 89.1
BraA06t24267Z Brassica rapa HOM05D001486 ORTHO05D004921 5.3e-23 111.3 55 89.1
Cpa.g.sc2.194 Carica papaya HOM05D001486 ORTHO05D004921 5.3e-23 111.3 56 89.3
PSO063G3102 Papaver somniferum HOM05D001486 ORTHO05D004921 5.3e-23 111.3 56 87.5
AL1G26870 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 6.9e-23 110.9 55 89.1
AT1G14850 Arabidopsis thaliana HOM05D001486 ORTHO05D004921 6.9e-23 110.9 55 89.1
Carub.0001s1464 Capsella rubella HOM05D001486 ORTHO05D004921 6.9e-23 110.9 55 89.1
CARHR015390 Cardamine hirsuta HOM05D001486 ORTHO05D004921 6.9e-23 110.9 55 89.1
ECA247G0951 Erigeron canadensis HOM05D001486 ORTHO05D004921 6.9e-23 110.9 56 89.3
Thhalv10006562m.g Eutrema salsugineum HOM05D001486 ORTHO05D004921 6.9e-23 110.9 55 89.1
ATR0753G157 Amborella trichopoda HOM05D001486 ORTHO05D004921 2.6e-22 109.0 56 87.5
Aa31LG1G260 Aethionema arabicum HOM05D001486 ORTHO05D004921 3.4e-22 108.6 55 85.5
CARHR227050 Cardamine hirsuta HOM05D001486 ORTHO05D004921 5.9e-22 107.8 58 82.8
Pp3c8_3720 Physcomitrium patens HOM05D001486 ORTHO05D004921 7.6e-22 107.5 56 80.4
SEGI_12550 Sequoiadendron giganteum HOM05D001486 ORTHO05D004921 7.6e-22 107.5 56 85.7
Peaxi162Scf00376g00816 Petunia axillaris HOM05D001486 ORTHO05D004921 2.9e-21 105.5 52 90.4
MD16G1018500 Malus domestica HOM05D001486 ORTHO05D004921 3.8e-21 105.1 56 85.7
Mapoly0035s0137 Marchantia polymorpha HOM05D001486 ORTHO05D004921 5.0e-21 104.8 56 80.4
AagrBONN_evm.TU.Sc2ySwM_362.1455 Anthoceros agrestis HOM05D001486 ORTHO05D004921 1.4e-20 103.2 56 78.6
HPP92_002282 Vanilla planifolia HOM05D001486 ORTHO05D004921 1.4e-20 103.2 56 83.9
Os06g0305200 Oryza sativa ssp. japonica HOM05D001486 ORTHO05D004921 4.2e-20 101.7 56 75.0
Zm00001eb009110 Zea mays HOM05D001486 ORTHO05D004921 1.6e-19 99.8 56 75.0
Zm00001eb399840 Zea mays HOM05D001486 ORTHO05D004921 3.9e-18 95.1 56 71.4
BcaC01g04114 Brassica carinata HOM05D001486 ORTHO05D012131 2.2e-13 79.3 55 72.7
Peaxi162Scf01391g00116 Petunia axillaris HOM05D001486 ORTHO05D004921 2.2e-13 79.3 56 66.1
BcaC09g49263 Brassica carinata HOM05D001486 ORTHO05D012131 2.1e-11 72.8 55 69.1
Cre09.g394350 Chlamydomonas reinhardtii HOM05D001486 ORTHO05D004921 3.7e-08 62.0 59 50.8
MCO15G435 Micromonas commoda HOM05D001486 ORTHO05D004921 6.3e-08 61.2 55 47.3
PRCOL_00002396 Prasinoderma coloniale HOM05D001486 ORTHO05D004921 2.4e-07 59.3 56 48.2


User provided reference genes

Program Settings